Species pathway expression context

Salvia miltiorrhiza

Candidate-to-expression mappings are displayed independently from candidate functional evidence.

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Matrix file
Salvia_miltiorrhiza.gene_tpm_log1p.tsv
Samples
12
Matrix genes
18,549
Expressed genes
18,334
Mapped candidate rows
68
Measured / ND
38 / 30
Partial quantitative coverage

Measured and ND rows coexist. ND cells use a separate hatch pattern and remain outside the continuous legend.

Row z-score−2.50+2.5
ND · Not detected
Unmapped candidate ID
Candidateflower-1flower-2flower-3leaf-1leaf-2leaf-3root-1root-2root-3stem-1stem-2stem-3
Smil02G0025930.1.v1.484Phenylpropanoid · LAC
Smil02G0030330.1.v1.484Phenylpropanoid · LAC
Smil02G0030900.1.v1.484Phenylpropanoid · LAC
Smil02G0031690.1.v1.484Phenylpropanoid · LAC
Smil02G0038030.1.v1.484Phenylpropanoid · LAC
Smil02G0038050.1.v1.484Phenylpropanoid · LAC
Smil03G0003110.1.v1.484Phenylpropanoid · LAC
Smil03G0024610.1.v1.484Phenylpropanoid · LAC
Smil03G0024620.1.v1.484Phenylpropanoid · LAC
Smil03G0024630.1.v1.484Phenylpropanoid · LAC
Smil03G0025710.1.v1.484Phenylpropanoid · LAC
Smil03G0025770.1.v1.484Phenylpropanoid · LAC
Smil03G0026610.1.v1.484Phenylpropanoid · LAC
Smil03G0030460.1.v1.484Phenylpropanoid · LAC
Smil04G0013530.1.v1.484Phenylpropanoid · LAC
Smil04G0020920.1.v1.484Phenylpropanoid · LAC
Smil04G0024000.1.v1.484Phenylpropanoid · LAC
Smil04G0024010.1.v1.484Phenylpropanoid · LAC
Smil04G0024020.1.v1.484Phenylpropanoid · LAC
Smil04G0024490.1.v1.484Phenylpropanoid · LAC
Smil05G0008300.1.v1.484Phenylpropanoid · LAC
Smil06G0005680.1.v1.484Phenylpropanoid · LAC
Smil06G0009450.1.v1.484Phenylpropanoid · LAC
Smil06G0018380.1.v1.484Phenylpropanoid · LAC
Smil07G0007840.1.v1.484Phenylpropanoid · LAC
Smil07G0008310.1.v1.484Phenylpropanoid · LAC
Smil07G0012180.1.v1.484Phenylpropanoid · LAC
Smil07G0016810.1.v1.484Phenylpropanoid · LAC
Smil07G0021510.1.v1.484Phenylpropanoid · LAC
Smil07G0021530.1.v1.484Phenylpropanoid · LAC
Smil00G0025180.1.v1.484Phenylpropanoid · PAL
Smil00G0045640.1.v1.484Phenylpropanoid · PAL
Smil00G0047120.1.v1.484Phenylpropanoid · PAL
Smil01G0013430.1.v1.484Phenylpropanoid · PAL
Smil01G0014920.1.v1.484Phenylpropanoid · PAL
Smil01G0023670.1.v1.484Phenylpropanoid · PAL
Smil01G0027570.1.v1.484Phenylpropanoid · PAL
Smil01G0028630.1.v1.484Phenylpropanoid · PAL
Smil02G0019380.1.v1.484Phenylpropanoid · PAL
Smil04G0019350.1.v1.484Phenylpropanoid · PAL
Smil06G0012580.1.v1.484Phenylpropanoid · PAL
Smil06G0018450.1.v1.484Phenylpropanoid · PAL
Smil07G0019860.1.v1.484Phenylpropanoid · PAL
SmilGWHAOSJ000007360010100.1.v1.484Phenylpropanoid · PAL
Smil00G0001930.1.v1.484Phenylpropanoid · POD
Smil00G0001980.1.v1.484Phenylpropanoid · POD
Smil00G0002520.1.v1.484Phenylpropanoid · POD
Smil00G0003360.1.v1.484Phenylpropanoid · POD
Smil00G0007090.1.v1.484Phenylpropanoid · POD
Smil00G0007100.1.v1.484Phenylpropanoid · POD

Quantitative legend: measured cells use a diverging row z-score scale with a meaningful centre at zero. Raw values remain available in cell inspectors.

Mapping boundary: Species-level transcriptome matrix summaries are shown independently. Candidate IDs are not joined to expression IDs because annotation versions do not map directly.