Species pathway expression context

Salvia miltiorrhiza

Candidate-to-expression mappings are displayed independently from candidate functional evidence.

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Matrix file
Salvia_miltiorrhiza.gene_tpm_log1p.tsv
Samples
12
Matrix genes
18,549
Expressed genes
18,334
Mapped candidate rows
68
Measured / ND
38 / 30
Partial quantitative coverage

Measured and ND rows coexist. ND cells use a separate hatch pattern and remain outside the continuous legend.

Row z-score−2.50+2.5
ND · Not detected
Unmapped candidate ID
Candidateflower-1flower-2flower-3leaf-1leaf-2leaf-3root-1root-2root-3stem-1stem-2stem-3
Smil02G0036600.1.v1.484Steroid / sterol · SMT1_SMT2_SMT3
Smil02G0036820.1.v1.484Steroid / sterol · SMT1_SMT2_SMT3
Smil03G0006660.1.v1.484Steroid / sterol · SMT1_SMT2_SMT3
Smil03G0011670.1.v1.484Steroid / sterol · SMT1_SMT2_SMT3
Smil03G0015360.1.v1.484Steroid / sterol · SMT1_SMT2_SMT3
Smil04G0009820.1.v1.484Steroid / sterol · SMT1_SMT2_SMT3
Smil04G0010840.1.v1.484Steroid / sterol · SMT1_SMT2_SMT3
Smil04G0016470.1.v1.484Steroid / sterol · SMT1_SMT2_SMT3
Smil04G0016940.1.v1.484Steroid / sterol · SMT1_SMT2_SMT3
Smil04G0029140.1.v1.484Steroid / sterol · SMT1_SMT2_SMT3
Smil05G0006460.1.v1.484Steroid / sterol · SMT1_SMT2_SMT3
Smil05G0006470.1.v1.484Steroid / sterol · SMT1_SMT2_SMT3
Smil05G0012540.1.v1.484Steroid / sterol · SMT1_SMT2_SMT3
Smil05G0013610.1.v1.484Steroid / sterol · SMT1_SMT2_SMT3
Smil05G0018470.1.v1.484Steroid / sterol · SMT1_SMT2_SMT3
Smil05G0018990.1.v1.484Steroid / sterol · SMT1_SMT2_SMT3
Smil05G0019000.1.v1.484Steroid / sterol · SMT1_SMT2_SMT3
Smil05G0019010.1.v1.484Steroid / sterol · SMT1_SMT2_SMT3
Smil05G0020020.1.v1.484Steroid / sterol · SMT1_SMT2_SMT3
Smil05G0021270.1.v1.484Steroid / sterol · SMT1_SMT2_SMT3
Smil05G0031860.1.v1.484Steroid / sterol · SMT1_SMT2_SMT3
Smil06G0003770.1.v1.484Steroid / sterol · SMT1_SMT2_SMT3
Smil06G0017340.1.v1.484Steroid / sterol · SMT1_SMT2_SMT3
Smil07G0000790.1.v1.484Steroid / sterol · SMT1_SMT2_SMT3
Smil07G0000920.1.v1.484Steroid / sterol · SMT1_SMT2_SMT3
Smil07G0004420.1.v1.484Steroid / sterol · SMT1_SMT2_SMT3
Smil07G0012060.1.v1.484Steroid / sterol · SMT1_SMT2_SMT3
Smil07G0019050.1.v1.484Steroid / sterol · SMT1_SMT2_SMT3
SmilGWHAOSJ000000390000210.1.v1.484Steroid / sterol · SMT1_SMT2_SMT3
SmilGWHAOSJ000008780012760.1.v1.484Steroid / sterol · SMT1_SMT2_SMT3
Smil00G0008060.1.v1.484Steroid / sterol · SQE
Smil02G0011860.1.v1.484Steroid / sterol · SQE
Smil02G0019370.1.v1.484Steroid / sterol · SQE
Smil03G0022120.1.v1.484Steroid / sterol · SQE
Smil00G0013050.1.v1.484Steroid / sterol · SQS_FDFT1
Smil00G0041560.1.v1.484Steroid / sterol · SQS_FDFT1
Smil02G0011280.1.v1.484Steroid / sterol · SQS_FDFT1
Smil03G0021950.1.v1.484Steroid / sterol · SQS_FDFT1
Smil06G0020120.1.v1.484Steroid / sterol · SQS_FDFT1
Smil01G0006170.1.v1.484Terpenoid · AACT
Smil03G0004960.1.v1.484Terpenoid · AACT
Smil05G0011770.1.v1.484Terpenoid · AACT
Smil00G0010540.1.v1.484Terpenoid · BAHD
Smil00G0013060.1.v1.484Terpenoid · BAHD
Smil00G0018740.1.v1.484Terpenoid · BAHD
Smil00G0020670.1.v1.484Terpenoid · BAHD
Smil00G0027210.1.v1.484Terpenoid · BAHD
Smil00G0031160.1.v1.484Terpenoid · BAHD
Smil00G0035990.1.v1.484Terpenoid · BAHD
Smil00G0042450.1.v1.484Terpenoid · BAHD

Quantitative legend: measured cells use a diverging row z-score scale with a meaningful centre at zero. Raw values remain available in cell inspectors.

Mapping boundary: Species-level transcriptome matrix summaries are shown independently. Candidate IDs are not joined to expression IDs because annotation versions do not map directly.