Species pathway expression context

Salvia miltiorrhiza

Candidate-to-expression mappings are displayed independently from candidate functional evidence.

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Matrix file
Salvia_miltiorrhiza.gene_tpm_log1p.tsv
Samples
12
Matrix genes
18,549
Expressed genes
18,334
Mapped candidate rows
68
Measured / ND
38 / 30
Partial quantitative coverage

Measured and ND rows coexist. ND cells use a separate hatch pattern and remain outside the continuous legend.

Row z-score−2.50+2.5
ND · Not detected
Unmapped candidate ID
Candidateflower-1flower-2flower-3leaf-1leaf-2leaf-3root-1root-2root-3stem-1stem-2stem-3
Smil00G0040480.1.v1.484Terpenoid · HDR_IspH
Smil00G0040530.1.v1.484Terpenoid · HDR_IspH
Smil00G0040540.1.v1.484Terpenoid · HDR_IspH
Smil00G0010260.1.v1.484Terpenoid · HDS_IspG
Smil00G0015490.1.v1.484Terpenoid · HDS_IspG
Smil00G0042500.1.v1.484Terpenoid · HDS_IspG
Smil00G0042530.1.v1.484Terpenoid · HDS_IspG
Smil00G0043850.1.v1.484Terpenoid · HDS_IspG
Smil01G0006040.1.v1.484Terpenoid · HDS_IspG
Smil01G0023460.1.v1.484Terpenoid · HDS_IspG
Smil02G0003320.1.v1.484Terpenoid · HDS_IspG
Smil02G0003840.1.v1.484Terpenoid · HDS_IspG
Smil02G0007770.1.v1.484Terpenoid · HDS_IspG
Smil02G0007820.1.v1.484Terpenoid · HDS_IspG
Smil02G0007850.1.v1.484Terpenoid · HDS_IspG
Smil02G0007910.1.v1.484Terpenoid · HDS_IspG
Smil02G0008720.1.v1.484Terpenoid · HDS_IspG
Smil02G0008800.1.v1.484Terpenoid · HDS_IspG
Smil02G0026070.1.v1.484Terpenoid · HDS_IspG
Smil02G0034350.1.v1.484Terpenoid · HDS_IspG
Smil02G0034540.1.v1.484Terpenoid · HDS_IspG
Smil04G0002830.1.v1.484Terpenoid · HDS_IspG
Smil04G0018610.1.v1.484Terpenoid · HDS_IspG
Smil04G0025050.1.v1.484Terpenoid · HDS_IspG
Smil06G0011240.1.v1.484Terpenoid · HDS_IspG
Smil06G0027210.1.v1.484Terpenoid · HDS_IspG
Smil06G0030280.1.v1.484Terpenoid · HDS_IspG
Smil00G0026680.1.v1.484Terpenoid · HMGR
Smil01G0007650.1.v1.484Terpenoid · HMGR
Smil03G0025260.1.v1.484Terpenoid · HMGR
Smil06G0029830.1.v1.484Terpenoid · HMGR
Smil06G0029840.1.v1.484Terpenoid · HMGR
Smil07G0016220.1.v1.484Terpenoid · HMGR
SmilGWHAOSJ000009330014560.1.v1.484Terpenoid · HMGR
Smil00G0017460.1.v1.484Terpenoid · HMGS
Smil00G0015060.1.v1.484Terpenoid · IDI
Smil00G0017130.1.v1.484Terpenoid · IDI
Smil00G0033510.1.v1.484Terpenoid · IDI
Smil00G0043410.1.v1.484Terpenoid · IDI
Smil01G0006360.1.v1.484Terpenoid · IDI
Smil01G0028010.1.v1.484Terpenoid · IDI
Smil02G0009520.1.v1.484Terpenoid · IDI
Smil02G0016280.1.v1.484Terpenoid · IDI
Smil02G0020700.1.v1.484Terpenoid · IDI
Smil02G0023580.1.v1.484Terpenoid · IDI
Smil02G0031410.1.v1.484Terpenoid · IDI
Smil02G0031590.1.v1.484Terpenoid · IDI
Smil02G0031610.1.v1.484Terpenoid · IDI
Smil03G0004990.1.v1.484Terpenoid · IDI
Smil03G0013280.1.v1.484Terpenoid · IDI

Quantitative legend: measured cells use a diverging row z-score scale with a meaningful centre at zero. Raw values remain available in cell inspectors.

Mapping boundary: Species-level transcriptome matrix summaries are shown independently. Candidate IDs are not joined to expression IDs because annotation versions do not map directly.