Species pathway expression context

Salvia miltiorrhiza

Candidate-to-expression mappings are displayed independently from candidate functional evidence.

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Matrix file
Salvia_miltiorrhiza.gene_tpm_log1p.tsv
Samples
12
Matrix genes
18,549
Expressed genes
18,334
Mapped candidate rows
68
Measured / ND
38 / 30
Partial quantitative coverage

Measured and ND rows coexist. ND cells use a separate hatch pattern and remain outside the continuous legend.

Row z-score−2.50+2.5
ND · Not detected
Unmapped candidate ID
Candidateflower-1flower-2flower-3leaf-1leaf-2leaf-3root-1root-2root-3stem-1stem-2stem-3
Smil03G0030210.1.v1.484Terpenoid · IDI
Smil04G0008680.1.v1.484Terpenoid · IDI
Smil05G0005340.1.v1.484Terpenoid · IDI
Smil05G0005360.1.v1.484Terpenoid · IDI
Smil05G0011780.1.v1.484Terpenoid · IDI
Smil05G0013040.1.v1.484Terpenoid · IDI
Smil05G0014610.1.v1.484Terpenoid · IDI
Smil05G0023400.1.v1.484Terpenoid · IDI
Smil05G0025480.1.v1.484Terpenoid · IDI
Smil05G0025490.1.v1.484Terpenoid · IDI
Smil05G0027720.1.v1.484Terpenoid · IDI
Smil06G0006520.1.v1.484Terpenoid · IDI
Smil07G0003510.1.v1.484Terpenoid · IDI
Smil07G0007790.1.v1.484Terpenoid · IDI
Smil07G0010200.1.v1.484Terpenoid · IDI
Smil07G0011500.1.v1.484Terpenoid · IDI
Smil02G0036540.1.v1.484Terpenoid · MCT_IspD
Smil06G0008480.1.v1.484Terpenoid · MCT_IspD
Smil05G0029460.1.v1.484Terpenoid · MDS_IspF
Smil00G0009410.1.v1.484Terpenoid · MVD
Smil00G0009510.1.v1.484Terpenoid · MVD
Smil00G0009590.1.v1.484Terpenoid · MVD
Smil00G0009660.1.v1.484Terpenoid · MVD
Smil03G0029980.1.v1.484Terpenoid · MVD
Smil02G0032470.1.v1.484Terpenoid · MVK
SmilGWHAOSJ000005730007610.1.v1.484Terpenoid · MVK
Smil00G0006080.1Terpenoid · TPSSmil00G0006080.v1.484
Smil00G0006080.1.v1.484Terpenoid · TPS
Smil00G0016270.1Terpenoid · TPSSmil00G0016270.v1.484
Smil00G0016300.1Terpenoid · TPSSmil00G0016300.v1.484
Smil00G0029680.1.v1.484Terpenoid · TPS
Smil00G0037580.1Terpenoid · TPSSmil00G0037580.v1.484
Smil00G0037580.1.v1.484Terpenoid · TPS
Smil00G0037600.1.v1.484Terpenoid · TPS
Smil00G0037780.1Terpenoid · TPSSmil00G0037780.v1.484
Smil00G0037780.1.v1.484Terpenoid · TPS
Smil00G0037790.1.v1.484Terpenoid · TPS
Smil00G0043450.1Terpenoid · TPSSmil00G0043450.v1.484
Smil00G0043450.1.v1.484Terpenoid · TPS
Smil01G0003400.1Terpenoid · TPSSmil01G0003400.v1.484
Smil01G0003400.1.v1.484Terpenoid · TPS
Smil01G0003850.1.v1.484Terpenoid · TPS
Smil01G0003890.1.v1.484Terpenoid · TPS
Smil01G0014610.1.v1.484Terpenoid · TPS
Smil01G0021340.1Terpenoid · TPSSmil01G0021340.v1.484
Smil01G0021340.1.v1.484Terpenoid · TPS
Smil01G0030080.1.v1.484Terpenoid · TPS
Smil02G0002570.1.v1.484Terpenoid · TPS
Smil02G0002580.1.v1.484Terpenoid · TPS
Smil02G0011750.1Terpenoid · TPSSmil02G0011750.v1.484

Quantitative legend: measured cells use a diverging row z-score scale with a meaningful centre at zero. Raw values remain available in cell inspectors.

Mapping boundary: Species-level transcriptome matrix summaries are shown independently. Candidate IDs are not joined to expression IDs because annotation versions do not map directly.