Species pathway expression context

Salvia miltiorrhiza

Candidate-to-expression mappings are displayed independently from candidate functional evidence.

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Matrix file
Salvia_miltiorrhiza.gene_tpm_log1p.tsv
Samples
12
Matrix genes
18,549
Expressed genes
18,334
Mapped candidate rows
68
Measured / ND
38 / 30
Partial quantitative coverage

Measured and ND rows coexist. ND cells use a separate hatch pattern and remain outside the continuous legend.

Row z-score−2.50+2.5
ND · Not detected
Unmapped candidate ID
Candidateflower-1flower-2flower-3leaf-1leaf-2leaf-3root-1root-2root-3stem-1stem-2stem-3
Smil04G0025340.1.v1.484Alkaloid · GES
Smil04G0025350.1.v1.484Alkaloid · GES
Smil04G0025360.1.v1.484Alkaloid · GES
Smil04G0025880.1.v1.484Alkaloid · GES
Smil04G0025890.1.v1.484Alkaloid · GES
Smil04G0025900.1.v1.484Alkaloid · GES
Smil04G0025910.1.v1.484Alkaloid · GES
Smil05G0000850.1.v1.484Alkaloid · GES
Smil05G0000870.1.v1.484Alkaloid · GES
Smil05G0000880.1.v1.484Alkaloid · GES
Smil05G0006480.1.v1.484Alkaloid · GES
Smil05G0007470.1.v1.484Alkaloid · GES
Smil05G0007480.1.v1.484Alkaloid · GES
Smil05G0007500.1.v1.484Alkaloid · GES
Smil05G0010090.1.v1.484Alkaloid · GES
Smil05G0018080.1.v1.484Alkaloid · GES
Smil05G0018210.1.v1.484Alkaloid · GES
Smil05G0018240.1.v1.484Alkaloid · GES
Smil05G0018260.1.v1.484Alkaloid · GES
Smil05G0021310.1.v1.484Alkaloid · GES
Smil05G0032820.1.v1.484Alkaloid · GES
Smil06G0027580.1.v1.484Alkaloid · GES
Smil07G0002220.1.v1.484Alkaloid · GES
SmilGWHAOSJ000002410002080.1.v1.484Alkaloid · GES
SmilGWHAOSJ000002410002090.1.v1.484Alkaloid · GES
SmilGWHAOSJ000009740015010.1.v1.484Alkaloid · GES
Smil00G0039170.1.v1.484Alkaloid · GS
Smil02G0016010.1.v1.484Alkaloid · GS
Smil03G0009560.1.v1.484Alkaloid · GS
Smil03G0026200.1.v1.484Alkaloid · GS
Smil03G0026310.1.v1.484Alkaloid · GS
Smil03G0029620.1.v1.484Alkaloid · GS
Smil03G0029630.1.v1.484Alkaloid · GS
Smil06G0016040.1.v1.484Alkaloid · GS
Smil06G0017690.1.v1.484Alkaloid · GS
Smil06G0019330.1.v1.484Alkaloid · GS
Smil06G0019340.1.v1.484Alkaloid · GS
Smil06G0019350.1.v1.484Alkaloid · GS
Smil00G0038890.1.v1.484Alkaloid · ISY
Smil04G0024300.1.v1.484Alkaloid · ISY
Smil00G0016680.1.v1.484Alkaloid · MPO
Smil00G0016690.1.v1.484Alkaloid · MPO
Smil00G0037070.1.v1.484Alkaloid · MPO
Smil04G0028550.1.v1.484Alkaloid · MPO
Smil04G0028560.1.v1.484Alkaloid · MPO
Smil04G0028570.1.v1.484Alkaloid · MPO
Smil04G0028580.1.v1.484Alkaloid · MPO
Smil04G0028590.1.v1.484Alkaloid · MPO
Smil06G0012900.1.v1.484Alkaloid · MPO
Smil00G0018200.1.v1.484Alkaloid · NCS

Quantitative legend: measured cells use a diverging row z-score scale with a meaningful centre at zero. Raw values remain available in cell inspectors.

Mapping boundary: Species-level transcriptome matrix summaries are shown independently. Candidate IDs are not joined to expression IDs because annotation versions do not map directly.