Species pathway expression context

Salvia miltiorrhiza

Candidate-to-expression mappings are displayed independently from candidate functional evidence.

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Matrix file
Salvia_miltiorrhiza.gene_tpm_log1p.tsv
Samples
12
Matrix genes
18,549
Expressed genes
18,334
Mapped candidate rows
68
Measured / ND
38 / 30
Partial quantitative coverage

Measured and ND rows coexist. ND cells use a separate hatch pattern and remain outside the continuous legend.

Row z-score−2.50+2.5
ND · Not detected
Unmapped candidate ID
Candidateflower-1flower-2flower-3leaf-1leaf-2leaf-3root-1root-2root-3stem-1stem-2stem-3
Smil00G0043960.1.v1.484Alkaloid · NCS
Smil01G0001950.1.v1.484Alkaloid · NCS
Smil01G0001960.1.v1.484Alkaloid · NCS
Smil01G0008340.1.v1.484Alkaloid · NCS
Smil02G0002290.1.v1.484Alkaloid · NCS
Smil02G0002300.1.v1.484Alkaloid · NCS
Smil02G0002310.1.v1.484Alkaloid · NCS
Smil02G0002320.1.v1.484Alkaloid · NCS
Smil02G0002350.1.v1.484Alkaloid · NCS
Smil02G0023250.1.v1.484Alkaloid · NCS
Smil03G0030530.1.v1.484Alkaloid · NCS
Smil04G0005110.1.v1.484Alkaloid · NCS
Smil04G0009050.1.v1.484Alkaloid · NCS
Smil04G0015950.1Alkaloid · NCSSmil04G0015950.v1.484
Smil04G0025140.1Alkaloid · NCSSmil04G0025140.v1.484
Smil05G0004930.1.v1.484Alkaloid · NCS
Smil05G0015560.1Alkaloid · NCSSmil05G0015560.v1.484
Smil07G0007540.1.v1.484Alkaloid · NCS
Smil07G0014250.1.v1.484Alkaloid · NCS
Smil00G0004630.1.v1.484Alkaloid · NMT
Smil00G0027990.1.v1.484Alkaloid · NMT
Smil00G0028280.1.v1.484Alkaloid · NMT
Smil00G0034170.1.v1.484Alkaloid · NMT
Smil00G0035900.1.v1.484Alkaloid · NMT
Smil01G0000170.1.v1.484Alkaloid · NMT
Smil01G0002790.1.v1.484Alkaloid · NMT
Smil01G0007630.1.v1.484Alkaloid · NMT
Smil01G0008060.1.v1.484Alkaloid · NMT
Smil01G0012400.1.v1.484Alkaloid · NMT
Smil01G0012480.1.v1.484Alkaloid · NMT
Smil01G0015050.1.v1.484Alkaloid · NMT
Smil01G0026630.1.v1.484Alkaloid · NMT
Smil01G0026810.1.v1.484Alkaloid · NMT
Smil01G0030560.1.v1.484Alkaloid · NMT
Smil02G0005730.1.v1.484Alkaloid · NMT
Smil02G0013760.1.v1.484Alkaloid · NMT
Smil02G0022300.1.v1.484Alkaloid · NMT
Smil02G0024660.1.v1.484Alkaloid · NMT
Smil02G0026050.1.v1.484Alkaloid · NMT
Smil03G0004450.1.v1.484Alkaloid · NMT
Smil03G0015980.1.v1.484Alkaloid · NMT
Smil03G0022290.1.v1.484Alkaloid · NMT
Smil03G0030820.1.v1.484Alkaloid · NMT
Smil03G0031040.1.v1.484Alkaloid · NMT
Smil03G0037460.1.v1.484Alkaloid · NMT
Smil03G0037560.1.v1.484Alkaloid · NMT
Smil04G0003040.1.v1.484Alkaloid · NMT
Smil04G0007490.1.v1.484Alkaloid · NMT
Smil04G0010390.1.v1.484Alkaloid · NMT
Smil04G0010770.1.v1.484Alkaloid · NMT

Quantitative legend: measured cells use a diverging row z-score scale with a meaningful centre at zero. Raw values remain available in cell inspectors.

Mapping boundary: Species-level transcriptome matrix summaries are shown independently. Candidate IDs are not joined to expression IDs because annotation versions do not map directly.