LamiOmicsDB Lamiaceae Multi-Omics Database
v1 808 species · 3 phylogenies · 6,313 sequences

Pathway-family scientific record

7DLGT

7DLGT enzyme-family module

This module includes PlantSME enzyme-family assignments and traceable candidate protein identifiers from genome-derived or transcriptome-derived protein sets.

Browse candidatesCompare speciesCSV
Stable locus plantsmeAlkaloid-related biosynthesis
Public candidate IDs
4,000
Species with candidates
80
Species with assignments
80
Source assignments
16,277
Gene-tree candidates
0
Motif candidates
0

Evidence profile

Available evidence layers

◆Candidate identifiers4,000 public species-linked identifiers can be inspected.
GTGene-tree workflow0 comparable source candidates; 0 high-confidence source calls.
MMotif-screen proxy0 motif-screen candidates; 0 with all required motif proxies.
100 kbLocal clustering proxy0 clusters across 0 species; maximum cluster size 0.

Comparative signature

Lamiaceae comparison fields

Rate delta
Not calculated
Prevalence delta
Not calculated
Comparable source
PlantSME family assignments
Comparable source count
16,277
Public candidate count
4,000
Evidence mode
plantsme

Species coverage

Assignment and locus coverage by species

Source family counts and public candidate identifiers are shown in separate columns.

SpeciesEvidence stateSource countCandidate IDsExpression
Teucrium chamaedrysAjugoideae · Teucrium Stable locus 86850 No matrix
Pogostemon cablinLamioideae · Pogostemon Stable locus 68950 Available
Ocimum basilicumNepetoideae · Ocimum Stable locus 45350 Available
Elsholtzia splendensNepetoideae · Elsholtzia Stable locus 42950 No matrix
Teucrium marumAjugoideae · Teucrium Stable locus 40950 No matrix
Stenogyne calaminthoidesLamioideae · Stenogyne Stable locus 37950 No matrix
Tectona grandisTectonoideae · Tectona Stable locus 33950 Available
Nepeta catariaNepetoideae · Nepeta Stable locus 32650 Available
Perilla frutescensNepetoideae · Perilla Stable locus 29350 No matrix
Callicarpa americanaCallicarpoideae · Callicarpa Stable locus 27950 No matrix
Callicarpa nudifloraCallicarpoideae · Callicarpa Stable locus 26950 No matrix
Salvia hispanicaNepetoideae · Salvia Stable locus 25350 No matrix
Salvia splendensNepetoideae · Salvia Stable locus 24850 No matrix
Hyssopus officinalisNepetoideae · Hyssopus Stable locus 24350 No matrix
Clinopodium barosmumNepetoideae · Clinopodium Stable locus 23950 No matrix
Glechoma longitubaNepetoideae · Glechoma Stable locus 22750 No matrix
Isodon lophanthoidesNepetoideae · Isodon Stable locus 22750 No matrix
Phlomoides rotataLamioideae · Phlomoides Stable locus 22550 No matrix
Clinopodium gracileNepetoideae · Clinopodium Stable locus 21250 No matrix
Mosla soochowensisNepetoideae · Mosla Stable locus 20850 No matrix
Mosla chinensisNepetoideae · Mosla Stable locus 20450 No matrix
Prunella vulgarisNepetoideae · Prunella Stable locus 20250 No matrix
Thymus quinquecostatusNepetoideae · Thymus Stable locus 20250 No matrix
Ajuga decumbensAjugoideae · Ajuga Stable locus 20050 No matrix
Salvia bowleyanaNepetoideae · Salvia Stable locus 19950 No matrix
Salvia miltiorrhizaNepetoideae · Salvia Stable locus 19950 Available
Salvia rosmarinusNepetoideae · Salvia Stable locus 19950 Available
Salvia divinorumNepetoideae · Salvia Stable locus 19850 No matrix
Origanum vulgareNepetoideae · Origanum Stable locus 19750 No matrix
Scutellaria baicalensisScutellarioideae · Scutellaria Stable locus 19650 No matrix
Nepeta mussiniiNepetoideae · Nepeta Stable locus 19550 Available
Dracocephalum rupestreNepetoideae · Dracocephalum Stable locus 18850 No matrix
Scutellaria barbataScutellarioideae · Scutellaria Stable locus 18150 No matrix
Perilla citriodoraNepetoideae · Perilla Stable locus 17950 No matrix
Perilla frutescens var. hirtellaNepetoideae · Perilla Stable locus 17950 No matrix
Vitex agnus-castusViticoideae · Vitex Stable locus 17750 No matrix
Marmoritis complanataNepetoideae · Marmoritis Stable locus 17650 No matrix
Collinsonia canadensisNepetoideae · Collinsonia Stable locus 17150 No matrix
Congea tomentosaSymphorematoideae · Congea Stable locus 17050 No matrix
Monarda didymaNepetoideae · Monarda Stable locus 16850 No matrix
Schizonepeta tenuifoliaNepetoideae · Schizonepeta Stable locus 16750 No matrix
Rotheca myricoidesAjugoideae · Rotheca Stable locus 16650 No matrix
Petraeovitex bambusetoriumPeronematoideae · Petraeovitex Stable locus 16450 No matrix
Thymus vulgarisNepetoideae · Thymus Stable locus 16450 No matrix
Leonurus japonicusLamioideae · Leonurus Stable locus 16350 No matrix
Plectranthus barbatusNepetoideae · Plectranthus Stable locus 16350 No matrix
Mentha x piperitaNepetoideae · Mentha Stable locus 16050 No matrix
Phlomis fruticosaLamioideae · Phlomis Stable locus 16050 No matrix
Agastache rugosaNepetoideae · Agastache Stable locus 15950 No matrix
Mentha spicataNepetoideae · Mentha Stable locus 15950 No matrix
Stachys officinalisLamioideae · Stachys Stable locus 15950 No matrix
Glechoma hederaceaNepetoideae · Glechoma Stable locus 15850 No matrix
Ocimum tenuiflorumNepetoideae · Ocimum Stable locus 15850 No matrix
Cornutia pyramidataPremnoideae · Cornutia Stable locus 15550 No matrix
Leonurus sibiricusLamioideae · Leonurus Stable locus 15550 No matrix
Teucrium canadenseAjugoideae · Teucrium Stable locus 15550 No matrix
Gmelina philippensisPremnoideae · Gmelina Stable locus 15350 No matrix
Melissa officinalisNepetoideae · Melissa Stable locus 15050 No matrix
Prostanthera lasianthosProstantheroideae · Prostanthera Stable locus 15050 No matrix
Holmskioldia sanguineaScutellarioideae · Holmskioldia Stable locus 14950 No matrix
Premna microphyllaPremnoideae · Premna Stable locus 14850 No matrix
Lycopus americanusNepetoideae · Lycopus Stable locus 14650 No matrix
Origanum majoranaNepetoideae · Origanum Stable locus 14550 No matrix
Lavandula angustifoliaNepetoideae · Lavandula Stable locus 14150 No matrix
Clerodendrum bungeiAjugoideae · Clerodendrum Stable locus 14050 No matrix
Ballota pseudodictamnusLamioideae · Ballota Stable locus 13950 No matrix
Ajuga reptansAjugoideae · Ajuga Stable locus 13850 No matrix
Lamium albumLamioideae · Lamium Stable locus 13750 No matrix
Perovskia atriplicifoliaNepetoideae · Perovskia Stable locus 13750 No matrix
Marrubium vulgareLamioideae · Marrubium Stable locus 13450 No matrix
Agastache foeniculumNepetoideae · Agastache Stable locus 12750 No matrix
Salvia officinalisNepetoideae · Salvia Stable locus 12750 No matrix
Leonotis leonurusLamioideae · Leonotis Stable locus 12650 No matrix
Isodon serraNepetoideae · Isodon Stable locus 12550 No matrix
Westringia fruticosaProstantheroideae · Westringia Stable locus 12350 No matrix
Hyptis suaveolensNepetoideae · Hyptis Stable locus 12250 No matrix
Leonurus cardiacaLamioideae · Leonurus Stable locus 12250 No matrix
Mentha longifoliaNepetoideae · Mentha Stable locus 10650 Available
Drepanocaryum sewerzowiiNepetoideae · Drepanocaryum Stable locus 7950 No matrix
Salvia sclareaNepetoideae · Salvia Stable locus 5350 No matrix

Candidate records

Traceable candidate identifiers

Filter and inspect candidate identifiers for this family.

Clear
Candidate IDSpeciesPathway / familyEvidenceConfidenceIdentityHMM score
evm.model.LG12.863
Clinopodium barosmumAlkaloid · 7DLGTblast+hmm High 59.7%70.8
evm.model.chr6.1405
Prunella vulgarisAlkaloid · 7DLGTblast+hmm High 56.4%70.8
LAAL_c50276_g1_i1_len_1690
Lamium albumAlkaloid · 7DLGTblast+hmm High 58.8%70.7
Lj2g07070.1
Leonurus japonicusAlkaloid · 7DLGTblast+hmm High 58.5%70.7
MACO_g13150.t1
Marmoritis complanataAlkaloid · 7DLGTblast+hmm High 56.7%70.7
Mlonscaffold_5_length_432313370133050.1.v1.326
Mentha longifoliaAlkaloid · 7DLGTblast+hmm High 57.8%70.7
Pat_B13G134600.m1
Pogostemon cablinAlkaloid · 7DLGTblast+hmm High 32.4%70.7
SAOF_c82532_g1_i1_len_1070
Salvia officinalisAlkaloid · 7DLGTblast+hmm High 58.5%70.7
Sbow03G0022000.1
Salvia bowleyanaAlkaloid · 7DLGTblast+hmm High 54.9%70.7
g1202.t1
Ajuga decumbensAlkaloid · 7DLGTblast+hmm High 55.1%70.7
9:ILLG8G107.21m1
Isodon lophanthoidesAlkaloid · 7DLGTblast+hmm High 52.4%70.6
CAame17G0020730.v1.94
Callicarpa americanaAlkaloid · 7DLGTblast+hmm High 61.6%70.6
CLBU_c46355_g4_i3_len_2280
Clerodendrum bungeiAlkaloid · 7DLGTblast+hmm High 53.5%70.6
COPY_c39417_g1_i1_len_1707
Cornutia pyramidataAlkaloid · 7DLGTblast+hmm High 54.1%70.6
MEOF_c26400_g1_i1_len_1600
Melissa officinalisAlkaloid · 7DLGTblast+hmm High 56.5%70.6
Pat_B03G174600.m1
Pogostemon cablinAlkaloid · 7DLGTblast+hmm High 38.4%70.6
Sbai1C603T7.1
Scutellaria baicalensisAlkaloid · 7DLGTblast+hmm High 59.6%70.6
Sbow03G0021710.1
Salvia bowleyanaAlkaloid · 7DLGTblast+hmm High 54.7%70.6
Smil06G0009830.1.v1.484
Salvia miltiorrhizaAlkaloid · 7DLGTblast+hmm High 54.7%70.6
303128.g2.t1
Ocimum basilicumAlkaloid · 7DLGTblast+hmm High 60.8%70.5
CAame06G0008260.v1.94
Callicarpa americanaAlkaloid · 7DLGTblast+hmm High 59.4%70.5
CLBU_c51832_g1_i1_len_1681
Clerodendrum bungeiAlkaloid · 7DLGTblast+hmm High 58.3%70.5
Clgra_014394-T1
Clinopodium gracileAlkaloid · 7DLGTblast+hmm High 53.4%70.5
Lj2g07120.1
Leonurus japonicusAlkaloid · 7DLGTblast+hmm High 61.6%70.5
Ls3g23270.1
Leonurus sibiricusAlkaloid · 7DLGTblast+hmm High 61.6%70.5
Roff10910084650
Salvia rosmarinusAlkaloid · 7DLGTblast+hmm High 53.6%70.5
Roff28080366750
Salvia rosmarinusAlkaloid · 7DLGTblast+hmm High 57.7%70.5
THVU_c66090_g1_i1_len_1388
Thymus vulgarisAlkaloid · 7DLGTblast+hmm High 65.0%70.5
Teucrium_chamaedrys__Tcha59332
Teucrium chamaedrysAlkaloid · 7DLGTblast+hmm High 57.0%70.5
Teucrium_chamaedrys__Tcha85288
Teucrium chamaedrysAlkaloid · 7DLGTblast+hmm High 54.7%70.5
XP_042029050.1
Salvia splendensAlkaloid · 7DLGTblast+hmm High 56.8%70.5
ocimum_sanctum_Ote100084990011
Ocimum tenuiflorumAlkaloid · 7DLGTblast+hmm High 43.1%70.5
rna-gnl|WGS:QIYW|chr02_25132151_25133699.mrna1
Perilla citriodoraAlkaloid · 7DLGTblast+hmm High 55.0%70.5
rna-gnl|WGS:QIYW|chr02_25132151_25133699.mrna1
Perilla frutescens var. hirtellaAlkaloid · 7DLGTblast+hmm High 55.0%70.5
scutellaria_barbata_GWHPAOTP022929
Scutellaria barbataAlkaloid · 7DLGTblast+hmm High 53.0%70.5
tectona_grandis_Tg07g04970.t1
Tectona grandisAlkaloid · 7DLGTblast+hmm High 55.1%70.5
tectona_grandis_Tg08g14040.t1
Tectona grandisAlkaloid · 7DLGTblast+hmm High 60.0%70.5
Es8B.G061600.t1
Elsholtzia splendensAlkaloid · 7DLGTblast+hmm High 57.7%70.4
KAL1534345.1
Salvia divinorumAlkaloid · 7DLGTblast+hmm High 53.1%70.4
Pat_A15G160200.m1
Pogostemon cablinAlkaloid · 7DLGTblast+hmm High 53.5%70.4
Pat_B10G028900.m1
Pogostemon cablinAlkaloid · 7DLGTblast+hmm High 53.9%70.4
Pat_B15G147800.m1
Pogostemon cablinAlkaloid · 7DLGTblast+hmm High 53.3%70.4
Pat_B23G100000.m1
Pogostemon cablinAlkaloid · 7DLGTblast+hmm High 59.1%70.4
THVU_c76565_g2_i2_len_1294
Thymus vulgarisAlkaloid · 7DLGTblast+hmm High 60.0%70.4
Teum.09G016280.1
Teucrium marumAlkaloid · 7DLGTblast+hmm High 58.1%70.4
Teum.09G016280.2
Teucrium marumAlkaloid · 7DLGTblast+hmm High 58.1%70.4
Teum.09G016280.3
Teucrium marumAlkaloid · 7DLGTblast+hmm High 58.1%70.4
WEFR_c36217_g1_i2_len_1566
Westringia fruticosaAlkaloid · 7DLGTblast+hmm High 58.4%70.4
XP_042004972.1
Salvia splendensAlkaloid · 7DLGTblast+hmm High 52.2%70.4
evm.model.chr5.1399
Prunella vulgarisAlkaloid · 7DLGTblast+hmm High 57.9%70.4