LamiOmicsDB Lamiaceae Multi-Omics Database
v1 808 species · 3 phylogenies · 6,313 sequences

Pathway-family scientific record

8HGO

8HGO enzyme-family module

This module includes PlantSME enzyme-family assignments and traceable candidate protein identifiers from genome-derived or transcriptome-derived protein sets.

Browse candidatesCompare speciesCSV
Stable locus plantsmeAlkaloid-related biosynthesis
Public candidate IDs
2,646
Species with candidates
80
Species with assignments
80
Source assignments
2,881
Gene-tree candidates
0
Motif candidates
0

Evidence profile

Available evidence layers

◆Candidate identifiers2,646 public species-linked identifiers can be inspected.
GTGene-tree workflow0 comparable source candidates; 0 high-confidence source calls.
MMotif-screen proxy0 motif-screen candidates; 0 with all required motif proxies.
100 kbLocal clustering proxy0 clusters across 0 species; maximum cluster size 0.

Comparative signature

Lamiaceae comparison fields

Rate delta
Not calculated
Prevalence delta
Not calculated
Comparable source
PlantSME family assignments
Comparable source count
2,881
Public candidate count
2,646
Evidence mode
plantsme

Species coverage

Assignment and locus coverage by species

Source family counts and public candidate identifiers are shown in separate columns.

SpeciesEvidence stateSource countCandidate IDsExpression
Teucrium chamaedrysAjugoideae · Teucrium Stable locus 9950 No matrix
Pogostemon cablinLamioideae · Pogostemon Stable locus 9650 Available
Ocimum basilicumNepetoideae · Ocimum Stable locus 9050 Available
Nepeta catariaNepetoideae · Nepeta Stable locus 8350 Available
Cornutia pyramidataPremnoideae · Cornutia Stable locus 6650 No matrix
Callicarpa americanaCallicarpoideae · Callicarpa Stable locus 6450 No matrix
Elsholtzia splendensNepetoideae · Elsholtzia Stable locus 6050 No matrix
Phlomis fruticosaLamioideae · Phlomis Stable locus 5950 No matrix
Salvia splendensNepetoideae · Salvia Stable locus 5950 No matrix
Teucrium marumAjugoideae · Teucrium Stable locus 5950 No matrix
Hyssopus officinalisNepetoideae · Hyssopus Stable locus 5050 No matrix
Premna microphyllaPremnoideae · Premna Stable locus 4949 No matrix
Thymus vulgarisNepetoideae · Thymus Stable locus 4949 No matrix
Clinopodium barosmumNepetoideae · Clinopodium Stable locus 4747 No matrix
Callicarpa nudifloraCallicarpoideae · Callicarpa Stable locus 4545 No matrix
Phlomoides rotataLamioideae · Phlomoides Stable locus 4545 No matrix
Origanum majoranaNepetoideae · Origanum Stable locus 4444 No matrix
Perilla frutescensNepetoideae · Perilla Stable locus 4444 No matrix
Stachys officinalisLamioideae · Stachys Stable locus 4444 No matrix
Salvia rosmarinusNepetoideae · Salvia Stable locus 4343 Available
Glechoma hederaceaNepetoideae · Glechoma Stable locus 4242 No matrix
Stenogyne calaminthoidesLamioideae · Stenogyne Stable locus 4141 No matrix
Mosla soochowensisNepetoideae · Mosla Stable locus 3838 No matrix
Ocimum tenuiflorumNepetoideae · Ocimum Stable locus 3838 No matrix
Tectona grandisTectonoideae · Tectona Stable locus 3838 Available
Isodon lophanthoidesNepetoideae · Isodon Stable locus 3636 No matrix
Salvia hispanicaNepetoideae · Salvia Stable locus 3636 No matrix
Westringia fruticosaProstantheroideae · Westringia Stable locus 3636 No matrix
Nepeta mussiniiNepetoideae · Nepeta Stable locus 3535 Available
Collinsonia canadensisNepetoideae · Collinsonia Stable locus 3434 No matrix
Isodon serraNepetoideae · Isodon Stable locus 3434 No matrix
Lycopus americanusNepetoideae · Lycopus Stable locus 3434 No matrix
Mosla chinensisNepetoideae · Mosla Stable locus 3333 No matrix
Salvia divinorumNepetoideae · Salvia Stable locus 3333 No matrix
Prunella vulgarisNepetoideae · Prunella Stable locus 3232 No matrix
Marmoritis complanataNepetoideae · Marmoritis Stable locus 3131 No matrix
Melissa officinalisNepetoideae · Melissa Stable locus 3131 No matrix
Plectranthus barbatusNepetoideae · Plectranthus Stable locus 3131 No matrix
Schizonepeta tenuifoliaNepetoideae · Schizonepeta Stable locus 3131 No matrix
Scutellaria baicalensisScutellarioideae · Scutellaria Stable locus 3131 No matrix
Perovskia atriplicifoliaNepetoideae · Perovskia Stable locus 3030 No matrix
Petraeovitex bambusetoriumPeronematoideae · Petraeovitex Stable locus 3030 No matrix
Scutellaria barbataScutellarioideae · Scutellaria Stable locus 3030 No matrix
Teucrium canadenseAjugoideae · Teucrium Stable locus 3030 No matrix
Dracocephalum rupestreNepetoideae · Dracocephalum Stable locus 2929 No matrix
Glechoma longitubaNepetoideae · Glechoma Stable locus 2929 No matrix
Mentha longifoliaNepetoideae · Mentha Stable locus 2929 Available
Monarda didymaNepetoideae · Monarda Stable locus 2929 No matrix
Salvia miltiorrhizaNepetoideae · Salvia Stable locus 2929 Available
Congea tomentosaSymphorematoideae · Congea Stable locus 2828 No matrix
Drepanocaryum sewerzowiiNepetoideae · Drepanocaryum Stable locus 2828 No matrix
Lamium albumLamioideae · Lamium Stable locus 2828 No matrix
Hyptis suaveolensNepetoideae · Hyptis Stable locus 2727 No matrix
Lavandula angustifoliaNepetoideae · Lavandula Stable locus 2727 No matrix
Origanum vulgareNepetoideae · Origanum Stable locus 2727 No matrix
Agastache foeniculumNepetoideae · Agastache Stable locus 2626 No matrix
Ajuga decumbensAjugoideae · Ajuga Stable locus 2626 No matrix
Ballota pseudodictamnusLamioideae · Ballota Stable locus 2626 No matrix
Holmskioldia sanguineaScutellarioideae · Holmskioldia Stable locus 2626 No matrix
Agastache rugosaNepetoideae · Agastache Stable locus 2525 No matrix
Clinopodium gracileNepetoideae · Clinopodium Stable locus 2525 No matrix
Leonurus japonicusLamioideae · Leonurus Stable locus 2525 No matrix
Mentha spicataNepetoideae · Mentha Stable locus 2525 No matrix
Gmelina philippensisPremnoideae · Gmelina Stable locus 2424 No matrix
Mentha x piperitaNepetoideae · Mentha Stable locus 2424 No matrix
Salvia officinalisNepetoideae · Salvia Stable locus 2424 No matrix
Thymus quinquecostatusNepetoideae · Thymus Stable locus 2424 No matrix
Clerodendrum bungeiAjugoideae · Clerodendrum Stable locus 2323 No matrix
Vitex agnus-castusViticoideae · Vitex Stable locus 2323 No matrix
Leonotis leonurusLamioideae · Leonotis Stable locus 2222 No matrix
Perilla citriodoraNepetoideae · Perilla Stable locus 2222 No matrix
Perilla frutescens var. hirtellaNepetoideae · Perilla Stable locus 2222 No matrix
Salvia sclareaNepetoideae · Salvia Stable locus 2222 No matrix
Prostanthera lasianthosProstantheroideae · Prostanthera Stable locus 2121 No matrix
Leonurus sibiricusLamioideae · Leonurus Stable locus 2020 No matrix
Rotheca myricoidesAjugoideae · Rotheca Stable locus 1919 No matrix
Salvia bowleyanaNepetoideae · Salvia Stable locus 1919 No matrix
Ajuga reptansAjugoideae · Ajuga Stable locus 1818 No matrix
Marrubium vulgareLamioideae · Marrubium Stable locus 1616 No matrix
Leonurus cardiacaLamioideae · Leonurus Stable locus 1414 No matrix

Candidate records

Traceable candidate identifiers

Filter and inspect candidate identifiers for this family.

Clear
Candidate IDSpeciesPathway / familyEvidenceConfidenceIdentityHMM score
Smil02G0008440.1.v1.484
Salvia miltiorrhizaAlkaloid · 8HGOblast+hmm Medium 26.6%29.6
g14634.t1.1.5b43bdc0
Hyssopus officinalisAlkaloid · 8HGOblast+hmm Medium 25.2%29.6
rna-gnl|WGS:QFCC|chr12_12186811_12189450.mrna1
Perilla frutescensAlkaloid · 8HGOblast+hmm Medium 25.8%29.6
g14634.t1
Hyssopus officinalisAlkaloid · 8HGOblast+hmm Medium 25.2%29.5
AG34_scaffold9_13490T
Agastache rugosaAlkaloid · 8HGOblast+hmm Medium 25.2%29.4
AGFO_c13031_g1_i1_len_1446
Agastache foeniculumAlkaloid · 8HGOblast+hmm Medium 25.2%29.3
ocimum_sanctum_Ote100011180091
Ocimum tenuiflorumAlkaloid · 8HGOblast+hmm Medium 29.5%29.2
COCA_c62630_g1_i1_len_1545
Collinsonia canadensisAlkaloid · 8HGOblast+hmm Medium 23.8%29.0
Es3B.G035500.t1
Elsholtzia splendensAlkaloid · 8HGOblast+hmm Medium 26.2%29.0
Roff24960329230
Salvia rosmarinusAlkaloid · 8HGOblast+hmm Medium 25.7%29.0
SAOF_c37696_g1_i1_len_1394
Salvia officinalisAlkaloid · 8HGOblast+hmm Medium 25.7%29.0
g13365.t1
Salvia sclareaAlkaloid · 8HGOblast+hmm Medium 26.2%29.0
Dru_1G0011140.1
Dracocephalum rupestreAlkaloid · 8HGOblast+hmm Medium 25.7%28.8
g3250.t1.1.5b43bdc5
Hyssopus officinalisAlkaloid · 8HGOblast+hmm Medium 22.8%28.6
rna-gnl|WGS:QFCC|chr11_46446319_46448979.mrna1
Perilla frutescensAlkaloid · 8HGOblast+hmm Medium 23.6%28.6
Es3A.G035600.t1
Elsholtzia splendensAlkaloid · 8HGOblast+hmm Medium 26.2%28.4
1863.g19.t1.1.5db151b9
Ocimum basilicumAlkaloid · 8HGOblast+hmm Medium 38.9%28.3
GlLon_028649-T1
Glechoma longitubaAlkaloid · 8HGOblast+hmm Medium 25.2%28.3
PLBA_c45675_g1_i1_len_1433
Plectranthus barbatusAlkaloid · 8HGOblast+hmm Medium 40.3%28.3
Ms_c009g01250.1
Mosla soochowensisAlkaloid · 8HGOblast+hmm Medium 25.2%28.2
MACO_g22547.t2
Marmoritis complanataAlkaloid · 8HGOblast+hmm Medium 25.2%28.1
MACO_g23230.t2
Marmoritis complanataAlkaloid · 8HGOblast+hmm Medium 25.2%28.1
XP_042028891.1
Salvia splendensAlkaloid · 8HGOblast+hmm Medium 21.8%28.1
MACO_g22547.t1
Marmoritis complanataAlkaloid · 8HGOblast+hmm Medium 25.2%28.0
MACO_g23230.t1
Marmoritis complanataAlkaloid · 8HGOblast+hmm Medium 25.2%28.0
Mc4g13290.1
Mosla chinensisAlkaloid · 8HGOblast+hmm Medium 24.3%28.0
XP_042028892.1
Salvia splendensAlkaloid · 8HGOblast+hmm Medium 23.2%28.0
1863.g19.t1
Ocimum basilicumAlkaloid · 8HGOblast+hmm Medium 25.2%27.9
LAAN_c53821_g1_i2_len_851
Lavandula angustifoliaAlkaloid · 8HGOblast+hmm Medium 40.3%27.1
evm.model.chr2.1870
Prunella vulgarisAlkaloid · 8HGOblast+hmm Medium 61.5%26.2
Teum.07G010730.2
Teucrium marumAlkaloid · 8HGOblast+hmm Medium 28.2%26.1
LYAM_c25843_g1_i1_len_1459
Lycopus americanusAlkaloid · 8HGOblast+hmm Medium 25.2%25.9
GlLon_034902-T1
Glechoma longitubaAlkaloid · 8HGOblast+hmm Medium 25.4%24.8
evm.model.ptg000005l.370
Isodon serraAlkaloid · 8HGOblast+hmm Medium 36.4%23.8
LELE_c73554_g1_i1_len_1377
Leonotis leonurusAlkaloid · 8HGOblast+hmm Medium 28.6%23.7
5:ILLG10G26.54m1
Isodon lophanthoidesAlkaloid · 8HGOblast+hmm Medium 36.4%22.3
PRMI_c39445_g4_i6_len_806
Premna microphyllaAlkaloid · 8HGOblast+hmm Medium 100.0%20.9
evm.model.Chr10.1457
Callicarpa nudifloraAlkaloid · 8HGOblast+hmm Medium 22.7%19.7
ocimum_sanctum_Ote100227940051
Ocimum tenuiflorumAlkaloid · 8HGOblast+hmm Medium 27.3%19.4
ocimum_sanctum_Ote100227940052
Ocimum tenuiflorumAlkaloid · 8HGOblast+hmm Medium 27.4%19.3
334418.g1.t1
Ocimum basilicumAlkaloid · 8HGOblast+hmm Medium 67.4%16.5
STOF_c62423_g3_i2_len_655
Stachys officinalisAlkaloid · 8HGOblast+hmm Medium 42.4%12.6
GLHE_c48136_g1_i1_len_376
Glechoma hederaceaAlkaloid · 8HGOblast+hmm Medium 46.9%11.7
AGFO_c22362_g2_i1_len_510
Agastache foeniculumAlkaloid · 8HGOblast Medium 47.4%—
GLHE_c58991_g2_i1_len_690
Glechoma hederaceaAlkaloid · 8HGOblast Medium 37.5%—
GMPH_c41941_g1_i1_len_263
Gmelina philippensisAlkaloid · 8HGOblast Medium 62.3%—
HYSU_c77389_g1_i1_len_497
Hyptis suaveolensAlkaloid · 8HGOblast Medium 70.4%—
LAAL_c15350_g1_i1_len_342
Lamium albumAlkaloid · 8HGOblast Medium 53.2%—
LYAM_c50568_g1_i1_len_308
Lycopus americanusAlkaloid · 8HGOblast Medium 55.0%—
MEPI_c72087_g1_i1_len_291
Mentha x piperitaAlkaloid · 8HGOblast Medium 63.3%—