LamiOmicsDB Lamiaceae Multi-Omics Database
v1 808 species · 3 phylogenies · 6,313 sequences

Pathway-family scientific record

CNMT

CNMT enzyme-family module

This module includes PlantSME enzyme-family assignments and traceable candidate protein identifiers from genome-derived or transcriptome-derived protein sets.

Browse candidatesCompare speciesCSV
Stable locus plantsmeAlkaloid-related biosynthesis
Public candidate IDs
185
Species with candidates
75
Species with assignments
75
Source assignments
185
Gene-tree candidates
0
Motif candidates
0

Evidence profile

Available evidence layers

◆Candidate identifiers185 public species-linked identifiers can be inspected.
GTGene-tree workflow0 comparable source candidates; 0 high-confidence source calls.
MMotif-screen proxy0 motif-screen candidates; 0 with all required motif proxies.
100 kbLocal clustering proxy0 clusters across 0 species; maximum cluster size 0.

Comparative signature

Lamiaceae comparison fields

Rate delta
Not calculated
Prevalence delta
Not calculated
Comparable source
PlantSME family assignments
Comparable source count
185
Public candidate count
185
Evidence mode
plantsme

Species coverage

Assignment and locus coverage by species

Source family counts and public candidate identifiers are shown in separate columns.

SpeciesEvidence stateSource countCandidate IDsExpression
Ocimum basilicumNepetoideae · Ocimum Stable locus 1212 Available
Teucrium chamaedrysAjugoideae · Teucrium Stable locus 1010 No matrix
Pogostemon cablinLamioideae · Pogostemon Stable locus 99 Available
Phlomoides rotataLamioideae · Phlomoides Stable locus 66 No matrix
Teucrium marumAjugoideae · Teucrium Stable locus 66 No matrix
Nepeta catariaNepetoideae · Nepeta Stable locus 55 Available
Salvia rosmarinusNepetoideae · Salvia Stable locus 55 Available
Cornutia pyramidataPremnoideae · Cornutia Stable locus 44 No matrix
Lavandula angustifoliaNepetoideae · Lavandula Stable locus 44 No matrix
Phlomis fruticosaLamioideae · Phlomis Stable locus 44 No matrix
Prunella vulgarisNepetoideae · Prunella Stable locus 44 No matrix
Salvia hispanicaNepetoideae · Salvia Stable locus 44 No matrix
Stenogyne calaminthoidesLamioideae · Stenogyne Stable locus 44 No matrix
Clerodendrum bungeiAjugoideae · Clerodendrum Stable locus 33 No matrix
Glechoma hederaceaNepetoideae · Glechoma Stable locus 33 No matrix
Marrubium vulgareLamioideae · Marrubium Stable locus 33 No matrix
Mosla soochowensisNepetoideae · Mosla Stable locus 33 No matrix
Prostanthera lasianthosProstantheroideae · Prostanthera Stable locus 33 No matrix
Rotheca myricoidesAjugoideae · Rotheca Stable locus 33 No matrix
Salvia bowleyanaNepetoideae · Salvia Stable locus 33 No matrix
Salvia splendensNepetoideae · Salvia Stable locus 33 No matrix
Scutellaria baicalensisScutellarioideae · Scutellaria Stable locus 33 No matrix
Scutellaria barbataScutellarioideae · Scutellaria Stable locus 33 No matrix
Agastache foeniculumNepetoideae · Agastache Stable locus 22 No matrix
Ajuga decumbensAjugoideae · Ajuga Stable locus 22 No matrix
Ballota pseudodictamnusLamioideae · Ballota Stable locus 22 No matrix
Callicarpa americanaCallicarpoideae · Callicarpa Stable locus 22 No matrix
Congea tomentosaSymphorematoideae · Congea Stable locus 22 No matrix
Dracocephalum rupestreNepetoideae · Dracocephalum Stable locus 22 No matrix
Elsholtzia splendensNepetoideae · Elsholtzia Stable locus 22 No matrix
Glechoma longitubaNepetoideae · Glechoma Stable locus 22 No matrix
Holmskioldia sanguineaScutellarioideae · Holmskioldia Stable locus 22 No matrix
Hyssopus officinalisNepetoideae · Hyssopus Stable locus 22 No matrix
Lycopus americanusNepetoideae · Lycopus Stable locus 22 No matrix
Mentha spicataNepetoideae · Mentha Stable locus 22 No matrix
Mentha x piperitaNepetoideae · Mentha Stable locus 22 No matrix
Ocimum tenuiflorumNepetoideae · Ocimum Stable locus 22 No matrix
Origanum majoranaNepetoideae · Origanum Stable locus 22 No matrix
Perilla citriodoraNepetoideae · Perilla Stable locus 22 No matrix
Perilla frutescensNepetoideae · Perilla Stable locus 22 No matrix
Perilla frutescens var. hirtellaNepetoideae · Perilla Stable locus 22 No matrix
Perovskia atriplicifoliaNepetoideae · Perovskia Stable locus 22 No matrix
Plectranthus barbatusNepetoideae · Plectranthus Stable locus 22 No matrix
Salvia divinorumNepetoideae · Salvia Stable locus 22 No matrix
Salvia miltiorrhizaNepetoideae · Salvia Stable locus 22 Available
Salvia officinalisNepetoideae · Salvia Stable locus 22 No matrix
Tectona grandisTectonoideae · Tectona Stable locus 22 Available
Teucrium canadenseAjugoideae · Teucrium Stable locus 22 No matrix
Thymus vulgarisNepetoideae · Thymus Stable locus 22 No matrix
Agastache rugosaNepetoideae · Agastache Stable locus 11 No matrix
Ajuga reptansAjugoideae · Ajuga Stable locus 11 No matrix
Callicarpa nudifloraCallicarpoideae · Callicarpa Stable locus 11 No matrix
Clinopodium barosmumNepetoideae · Clinopodium Stable locus 11 No matrix
Clinopodium gracileNepetoideae · Clinopodium Stable locus 11 No matrix
Drepanocaryum sewerzowiiNepetoideae · Drepanocaryum Stable locus 11 No matrix
Gmelina philippensisPremnoideae · Gmelina Stable locus 11 No matrix
Hyptis suaveolensNepetoideae · Hyptis Stable locus 11 No matrix
Isodon serraNepetoideae · Isodon Stable locus 11 No matrix
Lamium albumLamioideae · Lamium Stable locus 11 No matrix
Leonotis leonurusLamioideae · Leonotis Stable locus 11 No matrix
Leonurus cardiacaLamioideae · Leonurus Stable locus 11 No matrix
Leonurus japonicusLamioideae · Leonurus Stable locus 11 No matrix
Leonurus sibiricusLamioideae · Leonurus Stable locus 11 No matrix
Marmoritis complanataNepetoideae · Marmoritis Stable locus 11 No matrix
Melissa officinalisNepetoideae · Melissa Stable locus 11 No matrix
Mentha longifoliaNepetoideae · Mentha Stable locus 11 Available
Monarda didymaNepetoideae · Monarda Stable locus 11 No matrix
Mosla chinensisNepetoideae · Mosla Stable locus 11 No matrix
Origanum vulgareNepetoideae · Origanum Stable locus 11 No matrix
Petraeovitex bambusetoriumPeronematoideae · Petraeovitex Stable locus 11 No matrix
Premna microphyllaPremnoideae · Premna Stable locus 11 No matrix
Salvia sclareaNepetoideae · Salvia Stable locus 11 No matrix
Stachys officinalisLamioideae · Stachys Stable locus 11 No matrix
Thymus quinquecostatusNepetoideae · Thymus Stable locus 11 No matrix
Westringia fruticosaProstantheroideae · Westringia Stable locus 11 No matrix

Candidate records

Traceable candidate identifiers

Filter and inspect candidate identifiers for this family.

Clear
Candidate IDSpeciesPathway / familyEvidenceConfidenceIdentityHMM score
BAPS_c35870_g2_i1_len_1184
Ballota pseudodictamnusAlkaloid · CNMThmm Medium —22.1
Dru_5G0029860.1
Dracocephalum rupestreAlkaloid · CNMThmm Medium —22.0
Dru_5G0029860.2
Dracocephalum rupestreAlkaloid · CNMThmm Medium —22.0
SAOF_c26118_g1_i1_len_1075
Salvia officinalisAlkaloid · CNMThmm Medium —22.0
AG34_scaffold1_17790T
Agastache rugosaAlkaloid · CNMThmm Medium —21.9
XP_042011259.1
Salvia splendensAlkaloid · CNMThmm Medium —21.9
XP_047940704.1
Salvia hispanicaAlkaloid · CNMThmm Medium —21.9
XP_047940705.1
Salvia hispanicaAlkaloid · CNMThmm Medium —21.9
evm.model.LG17.351
Clinopodium barosmumAlkaloid · CNMThmm Medium —21.9
COTO_c41831_g1_i10_len_1438
Congea tomentosaAlkaloid · CNMThmm Medium —21.7
MACO_g3387.t1
Marmoritis complanataAlkaloid · CNMThmm Medium —21.7
g14364.t1.2.5b2d4a34
Nepeta catariaAlkaloid · CNMThmm Medium —21.6
Roff13310164030
Salvia rosmarinusAlkaloid · CNMThmm Medium —21.5
Roff13310164040
Salvia rosmarinusAlkaloid · CNMThmm Medium —21.5
g15524.t1
Salvia sclareaAlkaloid · CNMThmm Medium —21.5
746.g130.t1
Ocimum basilicumAlkaloid · CNMThmm Medium —21.4
746.g130.t1.1.5db15522
Ocimum basilicumAlkaloid · CNMThmm Medium —21.4
746.g130.t1.2.5db15522
Ocimum basilicumAlkaloid · CNMThmm Medium —21.4
GlLon_021239-T1
Glechoma longitubaAlkaloid · CNMThmm Medium —21.3
GlLon_021262-T1
Glechoma longitubaAlkaloid · CNMThmm Medium —21.3
Pat_A06G152800.m1
Pogostemon cablinAlkaloid · CNMThmm Medium —21.3
Pat_B06G144200.m1
Pogostemon cablinAlkaloid · CNMThmm Medium —21.3
Pat_B06G144200.m2
Pogostemon cablinAlkaloid · CNMThmm Medium —21.3
Sbai7A283T83.1
Scutellaria baicalensisAlkaloid · CNMThmm Medium —21.3
g14364.t1
Nepeta catariaAlkaloid · CNMThmm Medium —21.3
g14364.t1.3.5b2d4a34
Nepeta catariaAlkaloid · CNMThmm Medium —21.3
CLBU_c47774_g1_i2_len_1284
Clerodendrum bungeiAlkaloid · CNMThmm Medium —21.2
DRSE_g17778.t1
Drepanocaryum sewerzowiiAlkaloid · CNMThmm Medium —21.2
GWHPBJVA023485
Thymus quinquecostatusAlkaloid · CNMThmm Medium —21.2
Ms_c083g00011.1
Mosla soochowensisAlkaloid · CNMThmm Medium —21.2
GLHE_c60315_g1_i2_len_1133
Glechoma hederaceaAlkaloid · CNMThmm Medium —21.1
ORMA_c46745_g1_i2_len_2070
Origanum majoranaAlkaloid · CNMThmm Medium —21.1
g14364.t1.1.5b2d4a34
Nepeta catariaAlkaloid · CNMThmm Medium —21.1
PRMI_c44289_g1_i2_len_1159
Premna microphyllaAlkaloid · CNMThmm Medium —21.0
WEFR_c44628_g1_i4_len_1205
Westringia fruticosaAlkaloid · CNMThmm Medium —21.0
origanum_vulgare_264.g320.t1
Origanum vulgareAlkaloid · CNMThmm Medium —21.0
THVU_c71090_g1_i4_len_1149
Thymus vulgarisAlkaloid · CNMThmm Medium —20.9
XP_042068038.1
Salvia splendensAlkaloid · CNMThmm Medium —20.9
PEAT_c34368_g1_i3_len_1364
Perovskia atriplicifoliaAlkaloid · CNMThmm Medium —20.8
KAL1555704.1
Salvia divinorumAlkaloid · CNMThmm Medium —20.7
ORMA_c52178_g1_i1_len_1202
Origanum majoranaAlkaloid · CNMThmm Medium —20.7
CAame05G0042650.v1.94
Callicarpa americanaAlkaloid · CNMThmm Medium —20.6
PEBA_c37506_g1_i3_len_1282
Petraeovitex bambusetoriumAlkaloid · CNMThmm Medium —20.6
Pat_A05G155200.m1
Pogostemon cablinAlkaloid · CNMThmm Medium —20.6
Pat_A05G155200.m2
Pogostemon cablinAlkaloid · CNMThmm Medium —20.6
evm.model.chr13.1670
Prunella vulgarisAlkaloid · CNMThmm Medium —20.6
g14993.t1
Ajuga decumbensAlkaloid · CNMThmm Medium —20.6
g15123.t1
Ajuga decumbensAlkaloid · CNMThmm Medium —20.6
Teucrium_chamaedrys__Tcha82328
Teucrium chamaedrysAlkaloid · CNMThmm Medium —20.5
KAL1560572.1
Salvia divinorumAlkaloid · CNMThmm Medium —20.4