LamiOmicsDB Lamiaceae Multi-Omics Database
v1 808 species · 3 phylogenies · 6,313 sequences

Pathway-family scientific record

MPO

MPO enzyme-family module

This module includes PlantSME enzyme-family assignments and traceable candidate protein identifiers from genome-derived or transcriptome-derived protein sets.

Browse candidatesCompare speciesCSV
Stable locus plantsmeAlkaloid-related biosynthesis
Public candidate IDs
1,063
Species with candidates
80
Species with assignments
80
Source assignments
1,063
Gene-tree candidates
0
Motif candidates
0

Evidence profile

Available evidence layers

◆Candidate identifiers1,063 public species-linked identifiers can be inspected.
GTGene-tree workflow0 comparable source candidates; 0 high-confidence source calls.
MMotif-screen proxy0 motif-screen candidates; 0 with all required motif proxies.
100 kbLocal clustering proxy0 clusters across 0 species; maximum cluster size 0.

Comparative signature

Lamiaceae comparison fields

Rate delta
Not calculated
Prevalence delta
Not calculated
Comparable source
PlantSME family assignments
Comparable source count
1,063
Public candidate count
1,063
Evidence mode
plantsme

Species coverage

Assignment and locus coverage by species

Source family counts and public candidate identifiers are shown in separate columns.

SpeciesEvidence stateSource countCandidate IDsExpression
Pogostemon cablinLamioideae · Pogostemon Stable locus 4545 Available
Teucrium chamaedrysAjugoideae · Teucrium Stable locus 3434 No matrix
Stenogyne calaminthoidesLamioideae · Stenogyne Stable locus 3232 No matrix
Nepeta catariaNepetoideae · Nepeta Stable locus 3131 Available
Callicarpa americanaCallicarpoideae · Callicarpa Stable locus 2525 No matrix
Ocimum basilicumNepetoideae · Ocimum Stable locus 2424 Available
Rotheca myricoidesAjugoideae · Rotheca Stable locus 2121 No matrix
Ballota pseudodictamnusLamioideae · Ballota Stable locus 2020 No matrix
Origanum majoranaNepetoideae · Origanum Stable locus 2020 No matrix
Collinsonia canadensisNepetoideae · Collinsonia Stable locus 1919 No matrix
Leonotis leonurusLamioideae · Leonotis Stable locus 1919 No matrix
Cornutia pyramidataPremnoideae · Cornutia Stable locus 1717 No matrix
Tectona grandisTectonoideae · Tectona Stable locus 1717 Available
Westringia fruticosaProstantheroideae · Westringia Stable locus 1717 No matrix
Lycopus americanusNepetoideae · Lycopus Stable locus 1616 No matrix
Salvia splendensNepetoideae · Salvia Stable locus 1616 No matrix
Glechoma hederaceaNepetoideae · Glechoma Stable locus 1515 No matrix
Glechoma longitubaNepetoideae · Glechoma Stable locus 1515 No matrix
Lamium albumLamioideae · Lamium Stable locus 1515 No matrix
Ocimum tenuiflorumNepetoideae · Ocimum Stable locus 1515 No matrix
Phlomis fruticosaLamioideae · Phlomis Stable locus 1515 No matrix
Agastache foeniculumNepetoideae · Agastache Stable locus 1414 No matrix
Elsholtzia splendensNepetoideae · Elsholtzia Stable locus 1414 No matrix
Hyptis suaveolensNepetoideae · Hyptis Stable locus 1414 No matrix
Hyssopus officinalisNepetoideae · Hyssopus Stable locus 1414 No matrix
Mentha spicataNepetoideae · Mentha Stable locus 1414 No matrix
Mentha x piperitaNepetoideae · Mentha Stable locus 1414 No matrix
Monarda didymaNepetoideae · Monarda Stable locus 1414 No matrix
Nepeta mussiniiNepetoideae · Nepeta Stable locus 1414 Available
Perilla frutescensNepetoideae · Perilla Stable locus 1414 No matrix
Perovskia atriplicifoliaNepetoideae · Perovskia Stable locus 1414 No matrix
Petraeovitex bambusetoriumPeronematoideae · Petraeovitex Stable locus 1414 No matrix
Plectranthus barbatusNepetoideae · Plectranthus Stable locus 1414 No matrix
Scutellaria baicalensisScutellarioideae · Scutellaria Stable locus 1414 No matrix
Stachys officinalisLamioideae · Stachys Stable locus 1414 No matrix
Teucrium marumAjugoideae · Teucrium Stable locus 1414 No matrix
Ajuga reptansAjugoideae · Ajuga Stable locus 1313 No matrix
Leonurus cardiacaLamioideae · Leonurus Stable locus 1313 No matrix
Marrubium vulgareLamioideae · Marrubium Stable locus 1313 No matrix
Teucrium canadenseAjugoideae · Teucrium Stable locus 1313 No matrix
Thymus vulgarisNepetoideae · Thymus Stable locus 1313 No matrix
Salvia rosmarinusNepetoideae · Salvia Stable locus 1212 Available
Gmelina philippensisPremnoideae · Gmelina Stable locus 1111 No matrix
Holmskioldia sanguineaScutellarioideae · Holmskioldia Stable locus 1111 No matrix
Phlomoides rotataLamioideae · Phlomoides Stable locus 1111 No matrix
Premna microphyllaPremnoideae · Premna Stable locus 1111 No matrix
Prostanthera lasianthosProstantheroideae · Prostanthera Stable locus 1111 No matrix
Clinopodium barosmumNepetoideae · Clinopodium Stable locus 1010 No matrix
Congea tomentosaSymphorematoideae · Congea Stable locus 1010 No matrix
Lavandula angustifoliaNepetoideae · Lavandula Stable locus 1010 No matrix
Marmoritis complanataNepetoideae · Marmoritis Stable locus 1010 No matrix
Melissa officinalisNepetoideae · Melissa Stable locus 1010 No matrix
Origanum vulgareNepetoideae · Origanum Stable locus 1010 No matrix
Salvia hispanicaNepetoideae · Salvia Stable locus 1010 No matrix
Vitex agnus-castusViticoideae · Vitex Stable locus 1010 No matrix
Clinopodium gracileNepetoideae · Clinopodium Stable locus 99 No matrix
Dracocephalum rupestreNepetoideae · Dracocephalum Stable locus 99 No matrix
Isodon lophanthoidesNepetoideae · Isodon Stable locus 99 No matrix
Isodon serraNepetoideae · Isodon Stable locus 99 No matrix
Leonurus japonicusLamioideae · Leonurus Stable locus 99 No matrix
Salvia miltiorrhizaNepetoideae · Salvia Stable locus 99 Available
Scutellaria barbataScutellarioideae · Scutellaria Stable locus 99 No matrix
Agastache rugosaNepetoideae · Agastache Stable locus 88 No matrix
Ajuga decumbensAjugoideae · Ajuga Stable locus 88 No matrix
Callicarpa nudifloraCallicarpoideae · Callicarpa Stable locus 88 No matrix
Clerodendrum bungeiAjugoideae · Clerodendrum Stable locus 88 No matrix
Leonurus sibiricusLamioideae · Leonurus Stable locus 88 No matrix
Mentha longifoliaNepetoideae · Mentha Stable locus 88 Available
Mosla chinensisNepetoideae · Mosla Stable locus 88 No matrix
Salvia officinalisNepetoideae · Salvia Stable locus 88 No matrix
Schizonepeta tenuifoliaNepetoideae · Schizonepeta Stable locus 88 No matrix
Drepanocaryum sewerzowiiNepetoideae · Drepanocaryum Stable locus 77 No matrix
Mosla soochowensisNepetoideae · Mosla Stable locus 77 No matrix
Prunella vulgarisNepetoideae · Prunella Stable locus 77 No matrix
Salvia bowleyanaNepetoideae · Salvia Stable locus 77 No matrix
Salvia divinorumNepetoideae · Salvia Stable locus 77 No matrix
Thymus quinquecostatusNepetoideae · Thymus Stable locus 77 No matrix
Perilla citriodoraNepetoideae · Perilla Stable locus 66 No matrix
Perilla frutescens var. hirtellaNepetoideae · Perilla Stable locus 66 No matrix
Salvia sclareaNepetoideae · Salvia Stable locus 44 No matrix

Candidate records

Traceable candidate identifiers

Filter and inspect candidate identifiers for this family.

Clear
Candidate IDSpeciesPathway / familyEvidenceConfidenceIdentityHMM score
evm.model.ptg000011l.1736
Isodon serraAlkaloid · MPOblast+hmm Medium 79.2%24.7
STOF_c63551_g1_i11_len_1480
Stachys officinalisAlkaloid · MPOblast+hmm Medium 79.4%23.6
ROMY_c59873_g2_i1_len_399
Rotheca myricoidesAlkaloid · MPOblast+hmm Medium 92.5%16.1
Dru_4G0009550.1
Dracocephalum rupestreAlkaloid · MPOblast+hmm Medium 63.2%14.5
TECA_c18999_g1_i1_len_316
Teucrium canadenseAlkaloid · MPOblast+hmm Medium 88.6%14.5
LYAM_c91487_g1_i1_len_325
Lycopus americanusAlkaloid · MPOblast+hmm Medium 62.6%14.4
Sch000022806
Schizonepeta tenuifoliaAlkaloid · MPOblast+hmm Medium 49.0%14.3
ROMY_c59873_g1_i2_len_347
Rotheca myricoidesAlkaloid · MPOblast+hmm Medium 92.1%14.2
origanum_vulgare_733.g40.t1
Origanum vulgareAlkaloid · MPOblast+hmm Medium 52.6%13.9
COPY_c62265_g1_i1_len_265
Cornutia pyramidataAlkaloid · MPOblast+hmm Medium 92.0%13.8
STOF_c166882_g1_i1_len_251
Stachys officinalisAlkaloid · MPOblast+hmm Medium 71.6%13.8
MEPI_c60538_g3_i2_len_319
Mentha x piperitaAlkaloid · MPOblast+hmm Medium 95.3%13.6
PHFR_c88369_g1_i1_len_333
Phlomis fruticosaAlkaloid · MPOblast+hmm Medium 96.4%13.5
LELE_c58171_g1_i1_len_293
Leonotis leonurusAlkaloid · MPOblast+hmm Medium 70.8%13.2
KAL8524697.1
Phlomoides rotataAlkaloid · MPOblast+hmm Medium 56.0%12.4
KAL8524698.1
Phlomoides rotataAlkaloid · MPOblast+hmm Medium 56.0%12.4
HYSU_c19729_g1_i1_len_608
Hyptis suaveolensAlkaloid · MPOblast+hmm Medium 88.1%12.2
PEAT_c25542_g1_i1_len_883
Perovskia atriplicifoliaAlkaloid · MPOblast+hmm Medium 53.3%11.7
Stenogyne_calaminthoides__EVM_prediction_HiC_scaffold_366.1.mRNA1
Stenogyne calaminthoidesAlkaloid · MPOblast+hmm Medium 59.6%11.4
1609.g55.t1
Ocimum basilicumAlkaloid · MPOblast Medium 53.4%—
30:ILLG11G334.27m1
Isodon lophanthoidesAlkaloid · MPOblast Medium 34.7%—
368867.g3.t1
Ocimum basilicumAlkaloid · MPOblast Medium 38.7%—
378963.g1.t1.1.5db15283
Ocimum basilicumAlkaloid · MPOblast Medium 32.2%—
382380.g13.t1
Ocimum basilicumAlkaloid · MPOblast Medium 54.9%—
384047.g8.t1
Ocimum basilicumAlkaloid · MPOblast Medium 33.2%—
564.g115.t1
Ocimum basilicumAlkaloid · MPOblast Medium 59.2%—
AG34_scaffold1_21980T
Agastache rugosaAlkaloid · MPOblast Medium 33.3%—
AG34_scaffold1_24360T
Agastache rugosaAlkaloid · MPOblast Medium 36.5%—
AG34_scaffold1_30820T
Agastache rugosaAlkaloid · MPOblast Medium 33.3%—
AGFO_c14684_g1_i2_len_364
Agastache foeniculumAlkaloid · MPOblast Medium 46.8%—
AGFO_c36296_g1_i1_len_327
Agastache foeniculumAlkaloid · MPOblast Medium 53.6%—
AGFO_c5231_g1_i2_len_515
Agastache foeniculumAlkaloid · MPOblast Medium 84.8%—
AGFO_c61100_g1_i1_len_520
Agastache foeniculumAlkaloid · MPOblast Medium 39.8%—
AGFO_c6798_g1_i1_len_383
Agastache foeniculumAlkaloid · MPOblast Medium 51.1%—
AGFO_c75325_g1_i1_len_251
Agastache foeniculumAlkaloid · MPOblast Medium 91.6%—
AGFO_c9758_g1_i1_len_292
Agastache foeniculumAlkaloid · MPOblast Medium 61.9%—
AJRE_c16767_g1_i1_len_1180
Ajuga reptansAlkaloid · MPOblast Medium 32.6%—
AJRE_c25301_g1_i1_len_565
Ajuga reptansAlkaloid · MPOblast Medium 79.4%—
AJRE_c32085_g1_i2_len_1734
Ajuga reptansAlkaloid · MPOblast Medium 72.4%—
AJRE_c35944_g1_i1_len_983
Ajuga reptansAlkaloid · MPOblast Medium 70.5%—
AJRE_c56990_g1_i1_len_310
Ajuga reptansAlkaloid · MPOblast Medium 67.0%—
AJRE_c67058_g1_i1_len_323
Ajuga reptansAlkaloid · MPOblast Medium 50.5%—
AJRE_c69454_g1_i1_len_263
Ajuga reptansAlkaloid · MPOblast Medium 69.0%—
BAPS_c120208_g1_i1_len_253
Ballota pseudodictamnusAlkaloid · MPOblast Medium 42.3%—
BAPS_c25474_g1_i1_len_362
Ballota pseudodictamnusAlkaloid · MPOblast Medium 92.4%—
BAPS_c25474_g2_i1_len_566
Ballota pseudodictamnusAlkaloid · MPOblast Medium 82.8%—
BAPS_c37899_g1_i1_len_1451
Ballota pseudodictamnusAlkaloid · MPOblast Medium 42.2%—
BAPS_c38218_g1_i1_len_1119
Ballota pseudodictamnusAlkaloid · MPOblast Medium 75.0%—
BAPS_c39520_g2_i4_len_2361
Ballota pseudodictamnusAlkaloid · MPOblast Medium 38.9%—
BAPS_c46914_g1_i1_len_444
Ballota pseudodictamnusAlkaloid · MPOblast Medium 43.6%—