LamiOmicsDB Lamiaceae Multi-Omics Database
v1 808 species · 3 phylogenies · 6,313 sequences

Pathway-family scientific record

MPO

MPO enzyme-family module

This module includes PlantSME enzyme-family assignments and traceable candidate protein identifiers from genome-derived or transcriptome-derived protein sets.

Browse candidatesCompare speciesCSV
Stable locus plantsmeAlkaloid-related biosynthesis
Public candidate IDs
1,063
Species with candidates
80
Species with assignments
80
Source assignments
1,063
Gene-tree candidates
0
Motif candidates
0

Evidence profile

Available evidence layers

◆Candidate identifiers1,063 public species-linked identifiers can be inspected.
GTGene-tree workflow0 comparable source candidates; 0 high-confidence source calls.
MMotif-screen proxy0 motif-screen candidates; 0 with all required motif proxies.
100 kbLocal clustering proxy0 clusters across 0 species; maximum cluster size 0.

Comparative signature

Lamiaceae comparison fields

Rate delta
Not calculated
Prevalence delta
Not calculated
Comparable source
PlantSME family assignments
Comparable source count
1,063
Public candidate count
1,063
Evidence mode
plantsme

Species coverage

Assignment and locus coverage by species

Source family counts and public candidate identifiers are shown in separate columns.

SpeciesEvidence stateSource countCandidate IDsExpression
Pogostemon cablinLamioideae · Pogostemon Stable locus 4545 Available
Teucrium chamaedrysAjugoideae · Teucrium Stable locus 3434 No matrix
Stenogyne calaminthoidesLamioideae · Stenogyne Stable locus 3232 No matrix
Nepeta catariaNepetoideae · Nepeta Stable locus 3131 Available
Callicarpa americanaCallicarpoideae · Callicarpa Stable locus 2525 No matrix
Ocimum basilicumNepetoideae · Ocimum Stable locus 2424 Available
Rotheca myricoidesAjugoideae · Rotheca Stable locus 2121 No matrix
Ballota pseudodictamnusLamioideae · Ballota Stable locus 2020 No matrix
Origanum majoranaNepetoideae · Origanum Stable locus 2020 No matrix
Collinsonia canadensisNepetoideae · Collinsonia Stable locus 1919 No matrix
Leonotis leonurusLamioideae · Leonotis Stable locus 1919 No matrix
Cornutia pyramidataPremnoideae · Cornutia Stable locus 1717 No matrix
Tectona grandisTectonoideae · Tectona Stable locus 1717 Available
Westringia fruticosaProstantheroideae · Westringia Stable locus 1717 No matrix
Lycopus americanusNepetoideae · Lycopus Stable locus 1616 No matrix
Salvia splendensNepetoideae · Salvia Stable locus 1616 No matrix
Glechoma hederaceaNepetoideae · Glechoma Stable locus 1515 No matrix
Glechoma longitubaNepetoideae · Glechoma Stable locus 1515 No matrix
Lamium albumLamioideae · Lamium Stable locus 1515 No matrix
Ocimum tenuiflorumNepetoideae · Ocimum Stable locus 1515 No matrix
Phlomis fruticosaLamioideae · Phlomis Stable locus 1515 No matrix
Agastache foeniculumNepetoideae · Agastache Stable locus 1414 No matrix
Elsholtzia splendensNepetoideae · Elsholtzia Stable locus 1414 No matrix
Hyptis suaveolensNepetoideae · Hyptis Stable locus 1414 No matrix
Hyssopus officinalisNepetoideae · Hyssopus Stable locus 1414 No matrix
Mentha spicataNepetoideae · Mentha Stable locus 1414 No matrix
Mentha x piperitaNepetoideae · Mentha Stable locus 1414 No matrix
Monarda didymaNepetoideae · Monarda Stable locus 1414 No matrix
Nepeta mussiniiNepetoideae · Nepeta Stable locus 1414 Available
Perilla frutescensNepetoideae · Perilla Stable locus 1414 No matrix
Perovskia atriplicifoliaNepetoideae · Perovskia Stable locus 1414 No matrix
Petraeovitex bambusetoriumPeronematoideae · Petraeovitex Stable locus 1414 No matrix
Plectranthus barbatusNepetoideae · Plectranthus Stable locus 1414 No matrix
Scutellaria baicalensisScutellarioideae · Scutellaria Stable locus 1414 No matrix
Stachys officinalisLamioideae · Stachys Stable locus 1414 No matrix
Teucrium marumAjugoideae · Teucrium Stable locus 1414 No matrix
Ajuga reptansAjugoideae · Ajuga Stable locus 1313 No matrix
Leonurus cardiacaLamioideae · Leonurus Stable locus 1313 No matrix
Marrubium vulgareLamioideae · Marrubium Stable locus 1313 No matrix
Teucrium canadenseAjugoideae · Teucrium Stable locus 1313 No matrix
Thymus vulgarisNepetoideae · Thymus Stable locus 1313 No matrix
Salvia rosmarinusNepetoideae · Salvia Stable locus 1212 Available
Gmelina philippensisPremnoideae · Gmelina Stable locus 1111 No matrix
Holmskioldia sanguineaScutellarioideae · Holmskioldia Stable locus 1111 No matrix
Phlomoides rotataLamioideae · Phlomoides Stable locus 1111 No matrix
Premna microphyllaPremnoideae · Premna Stable locus 1111 No matrix
Prostanthera lasianthosProstantheroideae · Prostanthera Stable locus 1111 No matrix
Clinopodium barosmumNepetoideae · Clinopodium Stable locus 1010 No matrix
Congea tomentosaSymphorematoideae · Congea Stable locus 1010 No matrix
Lavandula angustifoliaNepetoideae · Lavandula Stable locus 1010 No matrix
Marmoritis complanataNepetoideae · Marmoritis Stable locus 1010 No matrix
Melissa officinalisNepetoideae · Melissa Stable locus 1010 No matrix
Origanum vulgareNepetoideae · Origanum Stable locus 1010 No matrix
Salvia hispanicaNepetoideae · Salvia Stable locus 1010 No matrix
Vitex agnus-castusViticoideae · Vitex Stable locus 1010 No matrix
Clinopodium gracileNepetoideae · Clinopodium Stable locus 99 No matrix
Dracocephalum rupestreNepetoideae · Dracocephalum Stable locus 99 No matrix
Isodon lophanthoidesNepetoideae · Isodon Stable locus 99 No matrix
Isodon serraNepetoideae · Isodon Stable locus 99 No matrix
Leonurus japonicusLamioideae · Leonurus Stable locus 99 No matrix
Salvia miltiorrhizaNepetoideae · Salvia Stable locus 99 Available
Scutellaria barbataScutellarioideae · Scutellaria Stable locus 99 No matrix
Agastache rugosaNepetoideae · Agastache Stable locus 88 No matrix
Ajuga decumbensAjugoideae · Ajuga Stable locus 88 No matrix
Callicarpa nudifloraCallicarpoideae · Callicarpa Stable locus 88 No matrix
Clerodendrum bungeiAjugoideae · Clerodendrum Stable locus 88 No matrix
Leonurus sibiricusLamioideae · Leonurus Stable locus 88 No matrix
Mentha longifoliaNepetoideae · Mentha Stable locus 88 Available
Mosla chinensisNepetoideae · Mosla Stable locus 88 No matrix
Salvia officinalisNepetoideae · Salvia Stable locus 88 No matrix
Schizonepeta tenuifoliaNepetoideae · Schizonepeta Stable locus 88 No matrix
Drepanocaryum sewerzowiiNepetoideae · Drepanocaryum Stable locus 77 No matrix
Mosla soochowensisNepetoideae · Mosla Stable locus 77 No matrix
Prunella vulgarisNepetoideae · Prunella Stable locus 77 No matrix
Salvia bowleyanaNepetoideae · Salvia Stable locus 77 No matrix
Salvia divinorumNepetoideae · Salvia Stable locus 77 No matrix
Thymus quinquecostatusNepetoideae · Thymus Stable locus 77 No matrix
Perilla citriodoraNepetoideae · Perilla Stable locus 66 No matrix
Perilla frutescens var. hirtellaNepetoideae · Perilla Stable locus 66 No matrix
Salvia sclareaNepetoideae · Salvia Stable locus 44 No matrix

Candidate records

Traceable candidate identifiers

Filter and inspect candidate identifiers for this family.

Clear
Candidate IDSpeciesPathway / familyEvidenceConfidenceIdentityHMM score
evm.model.Chr07.394
Callicarpa nudifloraAlkaloid · MPOblast+hmm High 68.8%74.1
19:ILLG3G21.109m1
Isodon lophanthoidesAlkaloid · MPOblast+hmm High 76.7%74.0
BAPS_c40474_g1_i1_len_2461
Ballota pseudodictamnusAlkaloid · MPOblast+hmm High 62.5%74.0
CLBU_c53438_g2_i3_len_2940
Clerodendrum bungeiAlkaloid · MPOblast+hmm High 90.5%74.0
LECA_c32445_g1_i1_len_1713
Leonurus cardiacaAlkaloid · MPOblast+hmm High 60.4%74.0
evm.model.ptg000002l.1959
Isodon serraAlkaloid · MPOblast+hmm High 76.7%74.0
MAVU_c28141_g1_i1_len_2414
Marrubium vulgareAlkaloid · MPOblast+hmm High 62.5%73.9
KAL8547657.1
Phlomoides rotataAlkaloid · MPOblast+hmm High 92.9%73.8
PHFR_c57110_g1_i1_len_2551
Phlomis fruticosaAlkaloid · MPOblast+hmm High 63.9%73.8
Roff17200220010
Salvia rosmarinusAlkaloid · MPOblast+hmm High 73.4%73.7
Sbai7A207T97.1
Scutellaria baicalensisAlkaloid · MPOblast+hmm High 67.3%73.7
Stenogyne_calaminthoides__EVM_prediction_HiC_scaffold_25.87.mRNA1
Stenogyne calaminthoidesAlkaloid · MPOblast+hmm High 65.3%73.7
Teucrium_chamaedrys__Tcha41384
Teucrium chamaedrysAlkaloid · MPOblast+hmm High 74.8%73.7
380021.g2.t1.1.5db15290
Ocimum basilicumAlkaloid · MPOblast+hmm High 88.9%73.6
Roff1971380255380
Salvia rosmarinusAlkaloid · MPOblast+hmm High 73.5%73.6
380021.g2.t1
Ocimum basilicumAlkaloid · MPOblast+hmm High 85.0%73.5
AJRE_c33677_g1_i1_len_2490
Ajuga reptansAlkaloid · MPOblast+hmm High 76.6%73.4
Es7A.G103800.t1
Elsholtzia splendensAlkaloid · MPOblast+hmm High 86.4%73.3
GLHE_c67221_g3_i2_len_2658
Glechoma hederaceaAlkaloid · MPOblast+hmm High 84.6%73.3
GlLon_024697-T1
Glechoma longitubaAlkaloid · MPOblast+hmm High 83.4%73.3
Stenogyne_calaminthoides__EVM_prediction_HiC_scaffold_30.57.mRNA1
Stenogyne calaminthoidesAlkaloid · MPOblast+hmm High 83.9%73.3
BAPS_c34719_g1_i1_len_2747
Ballota pseudodictamnusAlkaloid · MPOblast+hmm High 87.4%73.1
KAL8547655.1
Phlomoides rotataAlkaloid · MPOblast+hmm High 86.4%73.1
Ls1g19710.1
Leonurus sibiricusAlkaloid · MPOblast+hmm High 82.7%73.1
MAVU_c27205_g2_i1_len_2846
Marrubium vulgareAlkaloid · MPOblast+hmm High 87.5%73.1
STOF_c61327_g1_i2_len_2717
Stachys officinalisAlkaloid · MPOblast+hmm High 86.0%73.1
Stenogyne_calaminthoides__EVM_prediction_HiC_scaffold_30.53.mRNA1
Stenogyne calaminthoidesAlkaloid · MPOblast+hmm High 79.4%73.1
Stenogyne_calaminthoides__EVM_prediction_HiC_scaffold_31.535.mRNA1
Stenogyne calaminthoidesAlkaloid · MPOblast+hmm High 85.4%73.1
Stenogyne_calaminthoides__EVM_prediction_HiC_scaffold_25.89.mRNA1
Stenogyne calaminthoidesAlkaloid · MPOblast+hmm High 79.5%73.0
GWHPBJVA004188
Thymus quinquecostatusAlkaloid · MPOblast+hmm High 75.1%72.9
PHFR_c58894_g1_i1_len_2798
Phlomis fruticosaAlkaloid · MPOblast+hmm High 86.7%72.9
Pat_A29G098100.m1
Pogostemon cablinAlkaloid · MPOblast+hmm High 64.7%72.9
TECA_c32770_g1_i3_len_2832
Teucrium canadenseAlkaloid · MPOblast+hmm High 89.8%72.9
WEFR_c101609_g1_i1_len_2125
Westringia fruticosaAlkaloid · MPOblast+hmm High 66.5%72.9
ocimum_sanctum_Ote100049920021
Ocimum tenuiflorumAlkaloid · MPOblast+hmm High 63.8%72.9
PEAT_c52221_g1_i1_len_962
Perovskia atriplicifoliaAlkaloid · MPOblast+hmm High 68.4%72.8
evm.model.chr8.1027
Prunella vulgarisAlkaloid · MPOblast+hmm High 63.0%72.8
KAL8457940.1
Phlomoides rotataAlkaloid · MPOblast+hmm High 85.2%72.7
ocimum_sanctum_Ote100235820131
Ocimum tenuiflorumAlkaloid · MPOblast+hmm High 72.2%72.7
Smil00G0037070.1.v1.484
Salvia miltiorrhizaAlkaloid · MPOblast+hmm High 85.3%72.6
Teucrium_chamaedrys__Tcha142385
Teucrium chamaedrysAlkaloid · MPOblast+hmm High 64.6%72.6
PEAT_c43194_g3_i1_len_2941
Perovskia atriplicifoliaAlkaloid · MPOblast+hmm High 85.5%72.5
Roff18860244540
Salvia rosmarinusAlkaloid · MPOblast+hmm High 85.3%72.5
Roff27430359970
Salvia rosmarinusAlkaloid · MPOblast+hmm High 63.7%72.5
SAOF_c10949_g1_i1_len_2870
Salvia officinalisAlkaloid · MPOblast+hmm High 85.5%72.5
Sbow02G0014400.1
Salvia bowleyanaAlkaloid · MPOblast+hmm High 84.2%72.5
g11554.t1
Salvia sclareaAlkaloid · MPOblast+hmm High 85.2%72.5
Es7B.G104300.t1
Elsholtzia splendensAlkaloid · MPOblast+hmm High 86.3%72.4
MEOF_c20723_g1_i2_len_2796
Melissa officinalisAlkaloid · MPOblast+hmm High 85.6%72.4
tectona_grandis_Tg16g12520.t1
Tectona grandisAlkaloid · MPOblast+hmm High 86.9%72.3