NCS Family · LamiOmicsDB

Evidence profile

Available evidence layers

◆Candidate identifiers1,824 public species-linked identifiers can be inspected.

GTGene-tree workflow63 comparable source candidates; 0 high-confidence source calls.

MMotif-screen proxy0 motif-screen candidates; 0 with all required motif proxies.

100 kbLocal clustering proxy3 clusters across 2 species; maximum cluster size 7.

Comparative signature

Lamiaceae comparison fields

Rate delta: 0.02 · higher in Lamiaceae
Prevalence delta: 0
Comparable source: PlantSME family assignments
Comparable source count: 1,859
Public candidate count: 1,824
Evidence mode: plantsme

Species coverage

Assignment and locus coverage by species

Source family counts and public candidate identifiers are shown in separate columns.

Species	Evidence state	Source count	Candidate IDs	Expression
Ocimum basilicumNepetoideae · Ocimum	Stable locus	61	69	Available
Pogostemon cablinLamioideae · Pogostemon	Stable locus	64	55	Available
Nepeta catariaNepetoideae · Nepeta	Stable locus	55	54	Available
Teucrium chamaedrysAjugoideae · Teucrium	Stable locus	114	50	No matrix
Ajuga decumbensAjugoideae · Ajuga	Stable locus	49	49	No matrix
Teucrium marumAjugoideae · Teucrium	Stable locus	47	47	No matrix
Elsholtzia splendensNepetoideae · Elsholtzia	Stable locus	43	43	No matrix
Salvia splendensNepetoideae · Salvia	Stable locus	43	43	No matrix
Clinopodium barosmumNepetoideae · Clinopodium	Stable locus	40	40	No matrix
Scutellaria baicalensisScutellarioideae · Scutellaria	Stable locus	36	36	No matrix
Stenogyne calaminthoidesLamioideae · Stenogyne	Stable locus	36	36	No matrix
Prunella vulgarisNepetoideae · Prunella	Stable locus	35	35	No matrix
Nepeta mussiniiNepetoideae · Nepeta	Stable locus	32	35	Available
Hyssopus officinalisNepetoideae · Hyssopus	Stable locus	33	33	No matrix
Leonurus japonicusLamioideae · Leonurus	Stable locus	31	31	No matrix
Origanum vulgareNepetoideae · Origanum	Stable locus	30	31	No matrix
Salvia rosmarinusNepetoideae · Salvia	Stable locus	27	30	Available
Isodon lophanthoidesNepetoideae · Isodon	Stable locus	28	28	No matrix
Clinopodium gracileNepetoideae · Clinopodium	Stable locus	27	27	No matrix
Isodon serraNepetoideae · Isodon	Stable locus	27	27	No matrix
Callicarpa americanaCallicarpoideae · Callicarpa	Stable locus	19	27	No matrix
Perilla frutescensNepetoideae · Perilla	Stable locus	26	26	No matrix
Tectona grandisTectonoideae · Tectona	Stable locus	21	26	Available
Thymus quinquecostatusNepetoideae · Thymus	Stable locus	25	25	No matrix
Drepanocaryum sewerzowiiNepetoideae · Drepanocaryum	Stable locus	24	24	No matrix
Salvia hispanicaNepetoideae · Salvia	Stable locus	24	24	No matrix
Salvia bowleyanaNepetoideae · Salvia	Stable locus	20	23	No matrix
Glechoma longitubaNepetoideae · Glechoma	Stable locus	22	22	No matrix
Scutellaria barbataScutellarioideae · Scutellaria	Stable locus	21	22	No matrix
Salvia miltiorrhizaNepetoideae · Salvia	Stable locus	17	22	Available
Agastache rugosaNepetoideae · Agastache	Stable locus	21	21	No matrix
Leonurus sibiricusLamioideae · Leonurus	Stable locus	21	21	No matrix
Thymus vulgarisNepetoideae · Thymus	Stable locus	21	21	No matrix
Monarda didymaNepetoideae · Monarda	Stable locus	20	20	No matrix
Ocimum tenuiflorumNepetoideae · Ocimum	Stable locus	20	20	No matrix
Clerodendrum bungeiAjugoideae · Clerodendrum	Stable locus	19	19	No matrix
Marmoritis complanataNepetoideae · Marmoritis	Stable locus	19	19	No matrix
Mosla chinensisNepetoideae · Mosla	Stable locus	19	19	No matrix
Phlomoides rotataLamioideae · Phlomoides	Stable locus	19	19	No matrix
Plectranthus barbatusNepetoideae · Plectranthus	Stable locus	19	19	No matrix
Salvia divinorumNepetoideae · Salvia	Stable locus	19	19	No matrix
Salvia sclareaNepetoideae · Salvia	Stable locus	19	19	No matrix
Callicarpa nudifloraCallicarpoideae · Callicarpa	Stable locus	18	18	No matrix
Mosla soochowensisNepetoideae · Mosla	Stable locus	18	18	No matrix
Mentha longifoliaNepetoideae · Mentha	Stable locus	17	18	Available
Ballota pseudodictamnusLamioideae · Ballota	Stable locus	17	17	No matrix
Dracocephalum rupestreNepetoideae · Dracocephalum	Stable locus	17	17	No matrix
Leonotis leonurusLamioideae · Leonotis	Stable locus	17	17	No matrix
Marrubium vulgareLamioideae · Marrubium	Stable locus	17	17	No matrix
Origanum majoranaNepetoideae · Origanum	Stable locus	17	17	No matrix
Prostanthera lasianthosProstantheroideae · Prostanthera	Stable locus	17	17	No matrix
Cornutia pyramidataPremnoideae · Cornutia	Stable locus	16	16	No matrix
Holmskioldia sanguineaScutellarioideae · Holmskioldia	Stable locus	16	16	No matrix
Hyptis suaveolensNepetoideae · Hyptis	Stable locus	16	16	No matrix
Lamium albumLamioideae · Lamium	Stable locus	16	16	No matrix
Petraeovitex bambusetoriumPeronematoideae · Petraeovitex	Stable locus	16	16	No matrix
Perilla citriodoraNepetoideae · Perilla	Stable locus	15	16	No matrix
Ajuga reptansAjugoideae · Ajuga	Stable locus	15	15	No matrix
Congea tomentosaSymphorematoideae · Congea	Stable locus	15	15	No matrix
Leonurus cardiacaLamioideae · Leonurus	Stable locus	15	15	No matrix
Mentha x piperitaNepetoideae · Mentha	Stable locus	15	15	No matrix
Perilla frutescens var. hirtellaNepetoideae · Perilla	Stable locus	15	15	No matrix
Rotheca myricoidesAjugoideae · Rotheca	Stable locus	15	15	No matrix
Salvia officinalisNepetoideae · Salvia	Stable locus	15	15	No matrix
Agastache foeniculumNepetoideae · Agastache	Stable locus	14	14	No matrix
Lavandula angustifoliaNepetoideae · Lavandula	Stable locus	14	14	No matrix
Lycopus americanusNepetoideae · Lycopus	Stable locus	14	14	No matrix
Phlomis fruticosaLamioideae · Phlomis	Stable locus	14	14	No matrix
Premna microphyllaPremnoideae · Premna	Stable locus	14	14	No matrix
Stachys officinalisLamioideae · Stachys	Stable locus	14	14	No matrix
Schizonepeta tenuifoliaNepetoideae · Schizonepeta	Stable locus	13	13	No matrix
Mentha spicataNepetoideae · Mentha	Stable locus	12	12	No matrix
Teucrium canadenseAjugoideae · Teucrium	Stable locus	12	12	No matrix
Glechoma hederaceaNepetoideae · Glechoma	Stable locus	11	11	No matrix
Melissa officinalisNepetoideae · Melissa	Stable locus	11	11	No matrix
Perovskia atriplicifoliaNepetoideae · Perovskia	Stable locus	11	11	No matrix
Westringia fruticosaProstantheroideae · Westringia	Stable locus	10	10	No matrix
Collinsonia canadensisNepetoideae · Collinsonia	Stable locus	9	9	No matrix
Gmelina philippensisPremnoideae · Gmelina	Stable locus	9	9	No matrix
Vitex agnus-castusViticoideae · Vitex	Stable locus	9	9	No matrix

Candidate records

Traceable candidate identifiers

Filter and inspect candidate identifiers for this family.

Candidate ID	Species	Pathway / family	Evidence	Confidence	Identity	HMM score
PRLA_c53828_g1_i1_len_799	Prostanthera lasianthos	Alkaloid · `NCS`	hmm	Medium	—	101.4
g6882.t1	Salvia sclarea	Alkaloid · `NCS`	hmm	Medium	—	101.3
382527.g38.t1	Ocimum basilicum	Alkaloid · `NCS`	hmm	Medium	—	101.2
AG34_scaffold4_09540T	Agastache rugosa	Alkaloid · `NCS`	hmm	Medium	—	101.2
Lj9g04480.1	Leonurus japonicus	Alkaloid · `NCS`	hmm	Medium	—	101.1
CLBU_c71103_g1_i1_len_738	Clerodendrum bungei	Alkaloid · `NCS`	hmm	Medium	—	101.0
Teucrium_chamaedrys__Tcha64191	Teucrium chamaedrys	Alkaloid · `NCS`	hmm	Medium	—	101.0
LECA_c34242_g3_i1_len_644	Leonurus cardiaca	Alkaloid · `NCS`	hmm	Medium	—	100.9
Ls9g17340.1	Leonurus sibiricus	Alkaloid · `NCS`	hmm	Medium	—	100.8
Ls9g17400.1	Leonurus sibiricus	Alkaloid · `NCS`	hmm	Medium	—	100.8
PRMI_c114372_g1_i1_len_854	Premna microphylla	Alkaloid · `NCS`	hmm	Medium	—	100.8
COPY_c6871_g1_i1_len_517	Cornutia pyramidata	Alkaloid · `NCS`	hmm	Medium	—	100.7
ROMY_c62349_g1_i1_len_878	Rotheca myricoides	Alkaloid · `NCS`	hmm	Medium	—	100.6
Smil02G0002310.1.v1.484	Salvia miltiorrhiza	Alkaloid · `NCS`	hmm	Medium	—	100.6
g6881.t1	Salvia sclarea	Alkaloid · `NCS`	hmm	Medium	—	100.6
AJRE_c36936_g2_i2_len_534	Ajuga reptans	Alkaloid · `NCS`	hmm	Medium	—	100.5
Ms_c008g01761.1	Mosla soochowensis	Alkaloid · `NCS`	hmm	Medium	—	100.5
Mlonscaffold_7_length_366213000164010.1.v1.326	Mentha longifolia	Alkaloid · `NCS`	hmm	Medium	—	100.1
Pat_A28G111600.m1	Pogostemon cablin	Alkaloid · `NCS`	hmm	Medium	—	100.1
Smil02G0002300.1.v1.484	Salvia miltiorrhiza	Alkaloid · `NCS`	hmm	Medium	—	100.1
Lj9g04540.1	Leonurus japonicus	Alkaloid · `NCS`	hmm	Medium	—	100.0
PEAT_c24236_g1_i1_len_622	Perovskia atriplicifolia	Alkaloid · `NCS`	hmm	Medium	—	100.0
Stenogyne_calaminthoides__EVM_prediction_HiC_scaffold_42.2606.mRNA1	Stenogyne calaminthoides	Alkaloid · `NCS`	hmm	Medium	—	100.0
Teucrium_chamaedrys__Tcha37400	Teucrium chamaedrys	Alkaloid · `NCS`	hmm	Medium	—	100.0
ocimum_sanctum_Ote100116420051	Ocimum tenuiflorum	Alkaloid · `NCS`	hmm	Medium	—	100.0
evm.model.Chr09.1157	Callicarpa nudiflora	Alkaloid · `NCS`	hmm	Medium	—	99.9
COCA_c59034_g1_i1_len_926	Collinsonia canadensis	Alkaloid · `NCS`	hmm	Medium	—	99.8
Sch000011694	Schizonepeta tenuifolia	Alkaloid · `NCS`	hmm	Medium	—	99.8
Sch000021966	Schizonepeta tenuifolia	Alkaloid · `NCS`	hmm	Medium	—	99.8
Teucrium_chamaedrys__Tcha196426	Teucrium chamaedrys	Alkaloid · `NCS`	hmm	Medium	—	99.7
LELE_c40075_g1_i1_len_429	Leonotis leonurus	Alkaloid · `NCS`	hmm	Medium	—	99.6
rna-gnl\|WGS:QFCC\|chr10_47087344_47088617.mrna1	Perilla frutescens	Alkaloid · `NCS`	hmm	Medium	—	99.6
1630.g13.t1	Ocimum basilicum	Alkaloid · `NCS`	hmm	Medium	—	99.4
Clgra_038578-T1	Clinopodium gracile	Alkaloid · `NCS`	hmm	Medium	—	99.3
Es4B.G119500.t1	Elsholtzia splendens	Alkaloid · `NCS`	hmm	Medium	—	99.3
HOSA_c41280_g2_i2_len_708	Holmskioldia sanguinea	Alkaloid · `NCS`	hmm	Medium	—	99.3
AG34_scaffold4_07870T	Agastache rugosa	Alkaloid · `NCS`	hmm	Medium	—	99.2
AGFO_c25392_g1_i1_len_922	Agastache foeniculum	Alkaloid · `NCS`	hmm	Medium	—	99.2
PLBA_c90317_g1_i1_len_393	Plectranthus barbatus	Alkaloid · `NCS`	hmm	Medium	—	99.2
Teum.03G004280.1	Teucrium marum	Alkaloid · `NCS`	hmm	Medium	—	99.2
CAame14G0028320.v1.94	Callicarpa americana	Alkaloid · `NCS`	hmm	Medium	—	99.0
evm.model.Chr12.608	Callicarpa nudiflora	Alkaloid · `NCS`	hmm	Medium	—	99.0
Es4A.G119400.t1	Elsholtzia splendens	Alkaloid · `NCS`	hmm	Medium	—	98.8
Teucrium_chamaedrys__Tcha180088	Teucrium chamaedrys	Alkaloid · `NCS`	hmm	Medium	—	98.8
Teucrium_chamaedrys__Tcha86360	Teucrium chamaedrys	Alkaloid · `NCS`	hmm	Medium	—	98.8
COTO_c47338_g1_i1_len_753	Congea tomentosa	Alkaloid · `NCS`	hmm	Medium	—	98.7
Pat_A15G195100.m1	Pogostemon cablin	Alkaloid · `NCS`	hmm	Medium	—	98.7
origanum_vulgare_117988.g2.t1	Origanum vulgare	Alkaloid · `NCS`	hmm	Medium	—	98.5
Clgra_038580-T1	Clinopodium gracile	Alkaloid · `NCS`	hmm	Medium	—	98.4
evm.model.chr11.2167	Prunella vulgaris	Alkaloid · `NCS`	hmm	Medium	—	98.4