LamiOmicsDB Lamiaceae Multi-Omics Database
v1 808 species · 3 phylogenies · 6,313 sequences

Pathway-family scientific record

NMT

NMT enzyme-family module

This module includes PlantSME enzyme-family assignments and traceable candidate protein identifiers from genome-derived or transcriptome-derived protein sets.

Browse candidatesCompare speciesCSV
Stable locus plantsmeAlkaloid-related biosynthesis
Public candidate IDs
4,000
Species with candidates
80
Species with assignments
80
Source assignments
8,615
Gene-tree candidates
0
Motif candidates
0

Evidence profile

Available evidence layers

◆Candidate identifiers4,000 public species-linked identifiers can be inspected.
GTGene-tree workflow0 comparable source candidates; 0 high-confidence source calls.
MMotif-screen proxy0 motif-screen candidates; 0 with all required motif proxies.
100 kbLocal clustering proxy0 clusters across 0 species; maximum cluster size 0.

Comparative signature

Lamiaceae comparison fields

Rate delta
Not calculated
Prevalence delta
Not calculated
Comparable source
PlantSME family assignments
Comparable source count
8,615
Public candidate count
4,000
Evidence mode
plantsme

Species coverage

Assignment and locus coverage by species

Source family counts and public candidate identifiers are shown in separate columns.

SpeciesEvidence stateSource countCandidate IDsExpression
Pogostemon cablinLamioideae · Pogostemon Stable locus 46450 Available
Nepeta catariaNepetoideae · Nepeta Stable locus 33650 Available
Salvia splendensNepetoideae · Salvia Stable locus 30950 No matrix
Teucrium chamaedrysAjugoideae · Teucrium Stable locus 28850 No matrix
Teucrium marumAjugoideae · Teucrium Stable locus 24650 No matrix
Callicarpa americanaCallicarpoideae · Callicarpa Stable locus 23950 No matrix
Ocimum basilicumNepetoideae · Ocimum Stable locus 18350 Available
Hyssopus officinalisNepetoideae · Hyssopus Stable locus 17150 No matrix
Elsholtzia splendensNepetoideae · Elsholtzia Stable locus 16850 No matrix
Stenogyne calaminthoidesLamioideae · Stenogyne Stable locus 16550 No matrix
Phlomoides rotataLamioideae · Phlomoides Stable locus 15850 No matrix
Salvia rosmarinusNepetoideae · Salvia Stable locus 15850 Available
Nepeta mussiniiNepetoideae · Nepeta Stable locus 15650 Available
Salvia hispanicaNepetoideae · Salvia Stable locus 15150 No matrix
Rotheca myricoidesAjugoideae · Rotheca Stable locus 12050 No matrix
Salvia divinorumNepetoideae · Salvia Stable locus 11550 No matrix
Ocimum tenuiflorumNepetoideae · Ocimum Stable locus 11350 No matrix
Lavandula angustifoliaNepetoideae · Lavandula Stable locus 11050 No matrix
Clinopodium barosmumNepetoideae · Clinopodium Stable locus 10850 No matrix
Melissa officinalisNepetoideae · Melissa Stable locus 10850 No matrix
Dracocephalum rupestreNepetoideae · Dracocephalum Stable locus 10650 No matrix
Prunella vulgarisNepetoideae · Prunella Stable locus 10150 No matrix
Ballota pseudodictamnusLamioideae · Ballota Stable locus 10050 No matrix
Perilla frutescensNepetoideae · Perilla Stable locus 10050 No matrix
Hyptis suaveolensNepetoideae · Hyptis Stable locus 9950 No matrix
Cornutia pyramidataPremnoideae · Cornutia Stable locus 9850 No matrix
Ajuga decumbensAjugoideae · Ajuga Stable locus 9750 No matrix
Collinsonia canadensisNepetoideae · Collinsonia Stable locus 9450 No matrix
Prostanthera lasianthosProstantheroideae · Prostanthera Stable locus 9150 No matrix
Monarda didymaNepetoideae · Monarda Stable locus 9050 No matrix
Origanum vulgareNepetoideae · Origanum Stable locus 9050 No matrix
Plectranthus barbatusNepetoideae · Plectranthus Stable locus 9050 No matrix
Thymus vulgarisNepetoideae · Thymus Stable locus 9050 No matrix
Clerodendrum bungeiAjugoideae · Clerodendrum Stable locus 8950 No matrix
Phlomis fruticosaLamioideae · Phlomis Stable locus 8950 No matrix
Gmelina philippensisPremnoideae · Gmelina Stable locus 8850 No matrix
Leonurus cardiacaLamioideae · Leonurus Stable locus 8850 No matrix
Premna microphyllaPremnoideae · Premna Stable locus 8850 No matrix
Lamium albumLamioideae · Lamium Stable locus 8750 No matrix
Congea tomentosaSymphorematoideae · Congea Stable locus 8650 No matrix
Stachys officinalisLamioideae · Stachys Stable locus 8550 No matrix
Glechoma longitubaNepetoideae · Glechoma Stable locus 8450 No matrix
Teucrium canadenseAjugoideae · Teucrium Stable locus 8450 No matrix
Ajuga reptansAjugoideae · Ajuga Stable locus 8350 No matrix
Mentha x piperitaNepetoideae · Mentha Stable locus 8350 No matrix
Origanum majoranaNepetoideae · Origanum Stable locus 8350 No matrix
Westringia fruticosaProstantheroideae · Westringia Stable locus 8350 No matrix
Marmoritis complanataNepetoideae · Marmoritis Stable locus 8250 No matrix
Holmskioldia sanguineaScutellarioideae · Holmskioldia Stable locus 7950 No matrix
Lycopus americanusNepetoideae · Lycopus Stable locus 7850 No matrix
Petraeovitex bambusetoriumPeronematoideae · Petraeovitex Stable locus 7850 No matrix
Glechoma hederaceaNepetoideae · Glechoma Stable locus 7750 No matrix
Vitex agnus-castusViticoideae · Vitex Stable locus 7750 No matrix
Leonurus japonicusLamioideae · Leonurus Stable locus 7650 No matrix
Scutellaria baicalensisScutellarioideae · Scutellaria Stable locus 7650 No matrix
Salvia miltiorrhizaNepetoideae · Salvia Stable locus 7450 Available
Tectona grandisTectonoideae · Tectona Stable locus 7450 Available
Isodon lophanthoidesNepetoideae · Isodon Stable locus 7350 No matrix
Leonotis leonurusLamioideae · Leonotis Stable locus 7350 No matrix
Marrubium vulgareLamioideae · Marrubium Stable locus 7350 No matrix
Leonurus sibiricusLamioideae · Leonurus Stable locus 7250 No matrix
Mentha spicataNepetoideae · Mentha Stable locus 7250 No matrix
Mosla soochowensisNepetoideae · Mosla Stable locus 7250 No matrix
Agastache foeniculumNepetoideae · Agastache Stable locus 7150 No matrix
Callicarpa nudifloraCallicarpoideae · Callicarpa Stable locus 7150 No matrix
Drepanocaryum sewerzowiiNepetoideae · Drepanocaryum Stable locus 7150 No matrix
Thymus quinquecostatusNepetoideae · Thymus Stable locus 7150 No matrix
Scutellaria barbataScutellarioideae · Scutellaria Stable locus 6950 No matrix
Clinopodium gracileNepetoideae · Clinopodium Stable locus 6850 No matrix
Agastache rugosaNepetoideae · Agastache Stable locus 6750 No matrix
Schizonepeta tenuifoliaNepetoideae · Schizonepeta Stable locus 6750 No matrix
Isodon serraNepetoideae · Isodon Stable locus 6650 No matrix
Mentha longifoliaNepetoideae · Mentha Stable locus 6650 Available
Mosla chinensisNepetoideae · Mosla Stable locus 6650 No matrix
Salvia officinalisNepetoideae · Salvia Stable locus 6550 No matrix
Perovskia atriplicifoliaNepetoideae · Perovskia Stable locus 6350 No matrix
Perilla citriodoraNepetoideae · Perilla Stable locus 5650 No matrix
Perilla frutescens var. hirtellaNepetoideae · Perilla Stable locus 5650 No matrix
Salvia sclareaNepetoideae · Salvia Stable locus 5350 No matrix
Salvia bowleyanaNepetoideae · Salvia Stable locus 5150 No matrix

Candidate records

Traceable candidate identifiers

Filter and inspect candidate identifiers for this family.

Clear
Candidate IDSpeciesPathway / familyEvidenceConfidenceIdentityHMM score
PLBA_c41364_g1_i2_len_1191
Plectranthus barbatusAlkaloid · NMTblast+hmm High 63.7%123.3
STOF_c146264_g1_i1_len_1200
Stachys officinalisAlkaloid · NMTblast+hmm High 51.3%123.3
Sch000020875
Schizonepeta tenuifoliaAlkaloid · NMTblast+hmm High 65.0%123.3
KAL1535660.1
Salvia divinorumAlkaloid · NMTblast+hmm High 65.9%123.2
Pat_B23G009800.m1
Pogostemon cablinAlkaloid · NMTblast+hmm High 67.9%123.2
Sbow01G0050440.1
Salvia bowleyanaAlkaloid · NMTblast+hmm High 65.1%123.2
Teucrium_chamaedrys__Tcha72111
Teucrium chamaedrysAlkaloid · NMTblast+hmm High 45.4%123.2
VIAG_c36110_g1_i2_len_2764
Vitex agnus-castusAlkaloid · NMTblast+hmm High 59.4%123.2
GLHE_c65330_g1_i2_len_2111
Glechoma hederaceaAlkaloid · NMTblast+hmm High 59.9%123.1
Ms_c001g00426.1
Mosla soochowensisAlkaloid · NMTblast+hmm High 56.6%123.1
Ms_c004g01469.1
Mosla soochowensisAlkaloid · NMTblast+hmm High 56.6%123.1
TECA_c16005_g1_i1_len_1948
Teucrium canadenseAlkaloid · NMTblast+hmm High 48.0%123.1
COTO_c41882_g1_i4_len_3903
Congea tomentosaAlkaloid · NMTblast+hmm High 54.5%123.0
HYSU_c25972_g1_i4_len_2481
Hyptis suaveolensAlkaloid · NMTblast+hmm High 73.6%123.0
ROMY_c83305_g1_i1_len_2522
Rotheca myricoidesAlkaloid · NMTblast+hmm High 59.7%123.0
THVU_c77138_g1_i4_len_1981
Thymus vulgarisAlkaloid · NMTblast+hmm High 55.8%123.0
evm.model.Chr17.712
Callicarpa nudifloraAlkaloid · NMTblast+hmm High 49.5%123.0
COCA_c74063_g1_i1_len_2761
Collinsonia canadensisAlkaloid · NMTblast+hmm High 56.1%122.9
MODI_c32699_g1_i3_len_2836
Monarda didymaAlkaloid · NMTblast+hmm High 53.4%122.9
Pat_A24G010000.m1
Pogostemon cablinAlkaloid · NMTblast+hmm High 67.8%122.9
Smil03G0031040.1.v1.484
Salvia miltiorrhizaAlkaloid · NMTblast+hmm High 59.7%122.9
Teucrium_chamaedrys__Tcha103104
Teucrium chamaedrysAlkaloid · NMTblast+hmm High 65.3%122.9
Teucrium_chamaedrys__Tcha143260
Teucrium chamaedrysAlkaloid · NMTblast+hmm High 65.3%122.9
Teucrium_chamaedrys__Tcha45837
Teucrium chamaedrysAlkaloid · NMTblast+hmm High 52.0%122.9
Teum.09G012920.1
Teucrium marumAlkaloid · NMTblast+hmm High 45.2%122.9
Mc8g10420.1
Mosla chinensisAlkaloid · NMTblast+hmm High 65.2%122.8
XP_042063293.1
Salvia splendensAlkaloid · NMTblast+hmm High 57.2%122.8
evm.model.Chr07.1107
Callicarpa nudifloraAlkaloid · NMTblast+hmm High 59.7%122.8
CAame01G0016080.v1.94
Callicarpa americanaAlkaloid · NMTblast+hmm High 55.1%122.7
CAame17G0016270.v1.94
Callicarpa americanaAlkaloid · NMTblast+hmm High 49.3%122.7
CAame17G0016280.v1.94
Callicarpa americanaAlkaloid · NMTblast+hmm High 49.3%122.7
Ms_c006g02388.1
Mosla soochowensisAlkaloid · NMTblast+hmm High 60.3%122.7
PEAT_c37808_g1_i2_len_2901
Perovskia atriplicifoliaAlkaloid · NMTblast+hmm High 58.0%122.7
AG34_scaffold1_09770T
Agastache rugosaAlkaloid · NMTblast+hmm High 59.6%122.6
AGFO_c26457_g1_i1_len_2413
Agastache foeniculumAlkaloid · NMTblast+hmm High 59.6%122.6
MEOF_c12681_g1_i1_len_1424
Melissa officinalisAlkaloid · NMTblast+hmm High 57.1%122.6
PLBA_c26971_g1_i1_len_1013
Plectranthus barbatusAlkaloid · NMTblast+hmm High 59.6%122.6
SAOF_c32092_g1_i2_len_3933
Salvia officinalisAlkaloid · NMTblast+hmm High 62.8%122.6
WEFR_c40856_g1_i1_len_2031
Westringia fruticosaAlkaloid · NMTblast+hmm High 56.7%122.6
g38710.t1
Hyssopus officinalisAlkaloid · NMTblast+hmm High 65.4%122.6
origanum_vulgare_927.g32.t1
Origanum vulgareAlkaloid · NMTblast+hmm High 55.2%122.5
origanum_vulgare_927.g32.t1.1.5db0b56a
Origanum vulgareAlkaloid · NMTblast+hmm High 55.2%122.5
Ms_c008g01851.1
Mosla soochowensisAlkaloid · NMTblast+hmm High 65.2%122.4
LECA_c31781_g1_i1_len_2518
Leonurus cardiacaAlkaloid · NMTblast+hmm High 58.6%122.3
LYAM_c37402_g1_i1_len_3299
Lycopus americanusAlkaloid · NMTblast+hmm High 74.0%122.3
Sbai7P124T35.1
Scutellaria baicalensisAlkaloid · NMTblast+hmm High 64.9%122.3
g16059.t1
Hyssopus officinalisAlkaloid · NMTblast+hmm High 52.7%122.3
g27328.t1
Nepeta catariaAlkaloid · NMTblast+hmm High 39.0%122.3
COCA_c67472_g1_i1_len_1439
Collinsonia canadensisAlkaloid · NMTblast+hmm High 65.3%122.2
COCA_c72011_g1_i5_len_2513
Collinsonia canadensisAlkaloid · NMTblast+hmm High 60.5%122.2