PMT Family · LamiOmicsDB

Evidence profile

Available evidence layers

◆Candidate identifiers943 public species-linked identifiers can be inspected.

GTGene-tree workflow0 comparable source candidates; 0 high-confidence source calls.

MMotif-screen proxy0 motif-screen candidates; 0 with all required motif proxies.

100 kbLocal clustering proxy0 clusters across 0 species; maximum cluster size 0.

Comparative signature

Lamiaceae comparison fields

Rate delta: Not calculated
Prevalence delta: Not calculated
Comparable source: PlantSME family assignments
Comparable source count: 951
Public candidate count: 943
Evidence mode: plantsme

Species coverage

Assignment and locus coverage by species

Source family counts and public candidate identifiers are shown in separate columns.

Species	Evidence state	Source count	Candidate IDs	Expression
Ocimum basilicumNepetoideae · Ocimum	Stable locus	55	50	Available
Teucrium chamaedrysAjugoideae · Teucrium	Stable locus	53	50	No matrix
Pogostemon cablinLamioideae · Pogostemon	Stable locus	27	27	Available
Mentha longifoliaNepetoideae · Mentha	Stable locus	24	24	Available
Nepeta catariaNepetoideae · Nepeta	Stable locus	24	24	Available
Elsholtzia splendensNepetoideae · Elsholtzia	Stable locus	20	20	No matrix
Stenogyne calaminthoidesLamioideae · Stenogyne	Stable locus	20	20	No matrix
Clinopodium gracileNepetoideae · Clinopodium	Stable locus	19	19	No matrix
Mosla chinensisNepetoideae · Mosla	Stable locus	19	19	No matrix
Origanum vulgareNepetoideae · Origanum	Stable locus	19	19	No matrix
Ocimum tenuiflorumNepetoideae · Ocimum	Stable locus	18	18	No matrix
Salvia hispanicaNepetoideae · Salvia	Stable locus	18	18	No matrix
Teucrium marumAjugoideae · Teucrium	Stable locus	17	17	No matrix
Agastache rugosaNepetoideae · Agastache	Stable locus	16	16	No matrix
Hyssopus officinalisNepetoideae · Hyssopus	Stable locus	16	16	No matrix
Salvia splendensNepetoideae · Salvia	Stable locus	16	16	No matrix
Thymus quinquecostatusNepetoideae · Thymus	Stable locus	16	16	No matrix
Salvia divinorumNepetoideae · Salvia	Stable locus	15	15	No matrix
Clinopodium barosmumNepetoideae · Clinopodium	Stable locus	14	14	No matrix
Glechoma longitubaNepetoideae · Glechoma	Stable locus	14	14	No matrix
Melissa officinalisNepetoideae · Melissa	Stable locus	14	14	No matrix
Mosla soochowensisNepetoideae · Mosla	Stable locus	14	14	No matrix
Perilla frutescensNepetoideae · Perilla	Stable locus	14	14	No matrix
Salvia bowleyanaNepetoideae · Salvia	Stable locus	14	14	No matrix
Scutellaria baicalensisScutellarioideae · Scutellaria	Stable locus	14	14	No matrix
Lavandula angustifoliaNepetoideae · Lavandula	Stable locus	13	13	No matrix
Marmoritis complanataNepetoideae · Marmoritis	Stable locus	13	13	No matrix
Mentha spicataNepetoideae · Mentha	Stable locus	13	13	No matrix
Nepeta mussiniiNepetoideae · Nepeta	Stable locus	13	13	Available
Perilla citriodoraNepetoideae · Perilla	Stable locus	13	13	No matrix
Perilla frutescens var. hirtellaNepetoideae · Perilla	Stable locus	13	13	No matrix
Plectranthus barbatusNepetoideae · Plectranthus	Stable locus	13	13	No matrix
Rotheca myricoidesAjugoideae · Rotheca	Stable locus	13	13	No matrix
Salvia rosmarinusNepetoideae · Salvia	Stable locus	13	13	Available
Callicarpa nudifloraCallicarpoideae · Callicarpa	Stable locus	11	11	No matrix
Collinsonia canadensisNepetoideae · Collinsonia	Stable locus	11	11	No matrix
Dracocephalum rupestreNepetoideae · Dracocephalum	Stable locus	11	11	No matrix
Isodon serraNepetoideae · Isodon	Stable locus	11	11	No matrix
Prunella vulgarisNepetoideae · Prunella	Stable locus	11	11	No matrix
Ajuga reptansAjugoideae · Ajuga	Stable locus	10	10	No matrix
Glechoma hederaceaNepetoideae · Glechoma	Stable locus	10	10	No matrix
Isodon lophanthoidesNepetoideae · Isodon	Stable locus	10	10	No matrix
Monarda didymaNepetoideae · Monarda	Stable locus	10	10	No matrix
Petraeovitex bambusetoriumPeronematoideae · Petraeovitex	Stable locus	10	10	No matrix
Salvia miltiorrhizaNepetoideae · Salvia	Stable locus	10	10	Available
Schizonepeta tenuifoliaNepetoideae · Schizonepeta	Stable locus	10	10	No matrix
Callicarpa americanaCallicarpoideae · Callicarpa	Stable locus	9	9	No matrix
Holmskioldia sanguineaScutellarioideae · Holmskioldia	Stable locus	9	9	No matrix
Mentha x piperitaNepetoideae · Mentha	Stable locus	9	9	No matrix
Origanum majoranaNepetoideae · Origanum	Stable locus	9	9	No matrix
Salvia officinalisNepetoideae · Salvia	Stable locus	9	9	No matrix
Stachys officinalisLamioideae · Stachys	Stable locus	9	9	No matrix
Hyptis suaveolensNepetoideae · Hyptis	Stable locus	8	8	No matrix
Lamium albumLamioideae · Lamium	Stable locus	8	8	No matrix
Vitex agnus-castusViticoideae · Vitex	Stable locus	8	8	No matrix
Agastache foeniculumNepetoideae · Agastache	Stable locus	7	7	No matrix
Clerodendrum bungeiAjugoideae · Clerodendrum	Stable locus	7	7	No matrix
Cornutia pyramidataPremnoideae · Cornutia	Stable locus	7	7	No matrix
Marrubium vulgareLamioideae · Marrubium	Stable locus	7	7	No matrix
Phlomis fruticosaLamioideae · Phlomis	Stable locus	7	7	No matrix
Scutellaria barbataScutellarioideae · Scutellaria	Stable locus	7	7	No matrix
Congea tomentosaSymphorematoideae · Congea	Stable locus	6	6	No matrix
Drepanocaryum sewerzowiiNepetoideae · Drepanocaryum	Stable locus	6	6	No matrix
Perovskia atriplicifoliaNepetoideae · Perovskia	Stable locus	6	6	No matrix
Tectona grandisTectonoideae · Tectona	Stable locus	6	6	Available
Leonotis leonurusLamioideae · Leonotis	Stable locus	5	5	No matrix
Leonurus sibiricusLamioideae · Leonurus	Stable locus	5	5	No matrix
Ajuga decumbensAjugoideae · Ajuga	Stable locus	4	4	No matrix
Gmelina philippensisPremnoideae · Gmelina	Stable locus	4	4	No matrix
Leonurus japonicusLamioideae · Leonurus	Stable locus	4	4	No matrix
Lycopus americanusNepetoideae · Lycopus	Stable locus	4	4	No matrix
Prostanthera lasianthosProstantheroideae · Prostanthera	Stable locus	4	4	No matrix
Salvia sclareaNepetoideae · Salvia	Stable locus	4	4	No matrix
Thymus vulgarisNepetoideae · Thymus	Stable locus	4	4	No matrix
Ballota pseudodictamnusLamioideae · Ballota	Stable locus	3	3	No matrix
Phlomoides rotataLamioideae · Phlomoides	Stable locus	3	3	No matrix
Premna microphyllaPremnoideae · Premna	Stable locus	3	3	No matrix
Teucrium canadenseAjugoideae · Teucrium	Stable locus	3	3	No matrix
Westringia fruticosaProstantheroideae · Westringia	Stable locus	3	3	No matrix
Leonurus cardiacaLamioideae · Leonurus	Stable locus	2	2	No matrix

Candidate records

Traceable candidate identifiers

Filter and inspect candidate identifiers for this family.

Candidate ID	Species	Pathway / family	Evidence	Confidence	Identity	HMM score
HOSA_c17878_g1_i1_len_1191	Holmskioldia sanguinea	Alkaloid · `PMT`	blast	Medium	43.4%	—
HOSA_c38208_g2_i1_len_1749	Holmskioldia sanguinea	Alkaloid · `PMT`	blast	Medium	30.3%	—
HOSA_c42288_g2_i1_len_295	Holmskioldia sanguinea	Alkaloid · `PMT`	blast	Medium	37.9%	—
HOSA_c43455_g1_i1_len_463	Holmskioldia sanguinea	Alkaloid · `PMT`	blast	Medium	79.4%	—
HOSA_c45512_g1_i1_len_1720	Holmskioldia sanguinea	Alkaloid · `PMT`	blast	Medium	32.0%	—
HOSA_c58030_g1_i1_len_251	Holmskioldia sanguinea	Alkaloid · `PMT`	blast	Medium	41.0%	—
HOSA_c67244_g1_i1_len_298	Holmskioldia sanguinea	Alkaloid · `PMT`	blast	Medium	35.9%	—
HYSU_c18796_g2_i1_len_868	Hyptis suaveolens	Alkaloid · `PMT`	blast	Medium	31.0%	—
HYSU_c18981_g1_i2_len_1440	Hyptis suaveolens	Alkaloid · `PMT`	blast	Medium	42.3%	—
HYSU_c28776_g1_i1_len_1447	Hyptis suaveolens	Alkaloid · `PMT`	blast	Medium	30.3%	—
HYSU_c35981_g1_i1_len_485	Hyptis suaveolens	Alkaloid · `PMT`	blast	Medium	35.2%	—
HYSU_c41905_g1_i1_len_304	Hyptis suaveolens	Alkaloid · `PMT`	blast	Medium	35.8%	—
HYSU_c75351_g1_i1_len_1706	Hyptis suaveolens	Alkaloid · `PMT`	blast	Medium	30.6%	—
HYSU_c78194_g1_i1_len_485	Hyptis suaveolens	Alkaloid · `PMT`	blast	Medium	43.0%	—
HYSU_c9421_g1_i1_len_1450	Hyptis suaveolens	Alkaloid · `PMT`	blast	Medium	30.5%	—
KAL1533750.1	Salvia divinorum	Alkaloid · `PMT`	blast	Medium	30.0%	—
KAL1533755.1	Salvia divinorum	Alkaloid · `PMT`	blast	Medium	32.3%	—
KAL1533756.1	Salvia divinorum	Alkaloid · `PMT`	blast	Medium	32.3%	—
KAL1540714.1	Salvia divinorum	Alkaloid · `PMT`	blast	Medium	31.8%	—
KAL1552951.1	Salvia divinorum	Alkaloid · `PMT`	blast	Medium	30.1%	—
KAL1553055.1	Salvia divinorum	Alkaloid · `PMT`	blast	Medium	43.9%	—
KAL1554100.1	Salvia divinorum	Alkaloid · `PMT`	blast	Medium	30.7%	—
KAL1555793.1	Salvia divinorum	Alkaloid · `PMT`	blast	Medium	44.0%	—
KAL1566505.1	Salvia divinorum	Alkaloid · `PMT`	blast	Medium	30.9%	—
KAL1566539.1	Salvia divinorum	Alkaloid · `PMT`	blast	Medium	32.0%	—
KAL1566540.1	Salvia divinorum	Alkaloid · `PMT`	blast	Medium	35.2%	—
KAL1566541.1	Salvia divinorum	Alkaloid · `PMT`	blast	Medium	31.5%	—
KAL1566741.1	Salvia divinorum	Alkaloid · `PMT`	blast	Medium	30.5%	—
KAL1566742.1	Salvia divinorum	Alkaloid · `PMT`	blast	Medium	32.4%	—
KAL1567028.1	Salvia divinorum	Alkaloid · `PMT`	blast	Medium	56.9%	—
KAL8456736.1	Phlomoides rotata	Alkaloid · `PMT`	blast	Medium	30.4%	—
KAL8550097.1	Phlomoides rotata	Alkaloid · `PMT`	blast	Medium	30.3%	—
KAL8550098.1	Phlomoides rotata	Alkaloid · `PMT`	blast	Medium	32.0%	—
LAAL_c18711_g1_i1_len_764	Lamium album	Alkaloid · `PMT`	blast	Medium	34.8%	—
LAAL_c23569_g1_i1_len_934	Lamium album	Alkaloid · `PMT`	blast	Medium	34.3%	—
LAAL_c27489_g1_i1_len_1743	Lamium album	Alkaloid · `PMT`	blast	Medium	31.8%	—
LAAL_c33294_g1_i1_len_1096	Lamium album	Alkaloid · `PMT`	blast	Medium	42.3%	—
LAAL_c34272_g1_i1_len_1518	Lamium album	Alkaloid · `PMT`	blast	Medium	30.7%	—
LAAL_c40191_g1_i1_len_490	Lamium album	Alkaloid · `PMT`	blast	Medium	34.6%	—
LAAL_c51263_g1_i1_len_313	Lamium album	Alkaloid · `PMT`	blast	Medium	59.3%	—
LAAL_c56394_g1_i1_len_344	Lamium album	Alkaloid · `PMT`	blast	Medium	34.7%	—
LAAN_c1058_g1_i1_len_524	Lavandula angustifolia	Alkaloid · `PMT`	blast	Medium	38.6%	—
LAAN_c121766_g1_i1_len_374	Lavandula angustifolia	Alkaloid · `PMT`	blast	Medium	50.0%	—
LAAN_c34437_g1_i1_len_1742	Lavandula angustifolia	Alkaloid · `PMT`	blast	Medium	32.5%	—
LAAN_c39958_g1_i1_len_2867	Lavandula angustifolia	Alkaloid · `PMT`	blast	Medium	32.4%	—
LAAN_c45536_g1_i1_len_1555	Lavandula angustifolia	Alkaloid · `PMT`	blast	Medium	30.2%	—
LAAN_c48846_g1_i2_len_835	Lavandula angustifolia	Alkaloid · `PMT`	blast	Medium	33.1%	—
LAAN_c50226_g2_i1_len_2106	Lavandula angustifolia	Alkaloid · `PMT`	blast	Medium	30.5%	—
LAAN_c51056_g1_i1_len_909	Lavandula angustifolia	Alkaloid · `PMT`	blast	Medium	43.0%	—
LAAN_c52494_g1_i1_len_1769	Lavandula angustifolia	Alkaloid · `PMT`	blast	Medium	31.0%	—