LamiOmicsDB Lamiaceae Multi-Omics Database
v1 808 species · 3 phylogenies · 6,313 sequences

Pathway-family scientific record

SLS

SLS enzyme-family module

This module includes PlantSME enzyme-family assignments and traceable candidate protein identifiers from genome-derived or transcriptome-derived protein sets.

Browse candidatesCompare speciesCSV
Stable locus plantsmeAlkaloid-related biosynthesis
Public candidate IDs
566
Species with candidates
80
Species with assignments
80
Source assignments
566
Gene-tree candidates
0
Motif candidates
0

Evidence profile

Available evidence layers

◆Candidate identifiers566 public species-linked identifiers can be inspected.
GTGene-tree workflow0 comparable source candidates; 0 high-confidence source calls.
MMotif-screen proxy0 motif-screen candidates; 0 with all required motif proxies.
100 kbLocal clustering proxy0 clusters across 0 species; maximum cluster size 0.

Comparative signature

Lamiaceae comparison fields

Rate delta
Not calculated
Prevalence delta
Not calculated
Comparable source
PlantSME family assignments
Comparable source count
566
Public candidate count
566
Evidence mode
plantsme

Species coverage

Assignment and locus coverage by species

Source family counts and public candidate identifiers are shown in separate columns.

SpeciesEvidence stateSource countCandidate IDsExpression
Callicarpa americanaCallicarpoideae · Callicarpa Stable locus 2828 No matrix
Pogostemon cablinLamioideae · Pogostemon Stable locus 1818 Available
Teucrium chamaedrysAjugoideae · Teucrium Stable locus 1818 No matrix
Nepeta catariaNepetoideae · Nepeta Stable locus 1717 Available
Phlomoides rotataLamioideae · Phlomoides Stable locus 1717 No matrix
Cornutia pyramidataPremnoideae · Cornutia Stable locus 1616 No matrix
Hyssopus officinalisNepetoideae · Hyssopus Stable locus 1313 No matrix
Ocimum basilicumNepetoideae · Ocimum Stable locus 1313 Available
Origanum majoranaNepetoideae · Origanum Stable locus 1313 No matrix
Nepeta mussiniiNepetoideae · Nepeta Stable locus 1212 Available
Thymus vulgarisNepetoideae · Thymus Stable locus 1212 No matrix
Mentha x piperitaNepetoideae · Mentha Stable locus 1111 No matrix
Glechoma hederaceaNepetoideae · Glechoma Stable locus 1010 No matrix
Marrubium vulgareLamioideae · Marrubium Stable locus 1010 No matrix
Stenogyne calaminthoidesLamioideae · Stenogyne Stable locus 1010 No matrix
Clinopodium barosmumNepetoideae · Clinopodium Stable locus 99 No matrix
Gmelina philippensisPremnoideae · Gmelina Stable locus 99 No matrix
Salvia hispanicaNepetoideae · Salvia Stable locus 99 No matrix
Stachys officinalisLamioideae · Stachys Stable locus 99 No matrix
Teucrium canadenseAjugoideae · Teucrium Stable locus 99 No matrix
Ajuga decumbensAjugoideae · Ajuga Stable locus 88 No matrix
Clerodendrum bungeiAjugoideae · Clerodendrum Stable locus 88 No matrix
Hyptis suaveolensNepetoideae · Hyptis Stable locus 88 No matrix
Lavandula angustifoliaNepetoideae · Lavandula Stable locus 88 No matrix
Petraeovitex bambusetoriumPeronematoideae · Petraeovitex Stable locus 88 No matrix
Prostanthera lasianthosProstantheroideae · Prostanthera Stable locus 88 No matrix
Prunella vulgarisNepetoideae · Prunella Stable locus 88 No matrix
Salvia officinalisNepetoideae · Salvia Stable locus 88 No matrix
Salvia splendensNepetoideae · Salvia Stable locus 88 No matrix
Scutellaria barbataScutellarioideae · Scutellaria Stable locus 88 No matrix
Vitex agnus-castusViticoideae · Vitex Stable locus 88 No matrix
Ballota pseudodictamnusLamioideae · Ballota Stable locus 77 No matrix
Congea tomentosaSymphorematoideae · Congea Stable locus 77 No matrix
Elsholtzia splendensNepetoideae · Elsholtzia Stable locus 77 No matrix
Holmskioldia sanguineaScutellarioideae · Holmskioldia Stable locus 77 No matrix
Lamium albumLamioideae · Lamium Stable locus 77 No matrix
Leonurus cardiacaLamioideae · Leonurus Stable locus 77 No matrix
Premna microphyllaPremnoideae · Premna Stable locus 77 No matrix
Agastache foeniculumNepetoideae · Agastache Stable locus 66 No matrix
Callicarpa nudifloraCallicarpoideae · Callicarpa Stable locus 66 No matrix
Lycopus americanusNepetoideae · Lycopus Stable locus 66 No matrix
Mentha spicataNepetoideae · Mentha Stable locus 66 No matrix
Phlomis fruticosaLamioideae · Phlomis Stable locus 66 No matrix
Teucrium marumAjugoideae · Teucrium Stable locus 66 No matrix
Agastache rugosaNepetoideae · Agastache Stable locus 55 No matrix
Drepanocaryum sewerzowiiNepetoideae · Drepanocaryum Stable locus 55 No matrix
Leonurus sibiricusLamioideae · Leonurus Stable locus 55 No matrix
Melissa officinalisNepetoideae · Melissa Stable locus 55 No matrix
Monarda didymaNepetoideae · Monarda Stable locus 55 No matrix
Perilla frutescensNepetoideae · Perilla Stable locus 55 No matrix
Perovskia atriplicifoliaNepetoideae · Perovskia Stable locus 55 No matrix
Plectranthus barbatusNepetoideae · Plectranthus Stable locus 55 No matrix
Salvia rosmarinusNepetoideae · Salvia Stable locus 55 Available
Westringia fruticosaProstantheroideae · Westringia Stable locus 55 No matrix
Clinopodium gracileNepetoideae · Clinopodium Stable locus 44 No matrix
Collinsonia canadensisNepetoideae · Collinsonia Stable locus 44 No matrix
Dracocephalum rupestreNepetoideae · Dracocephalum Stable locus 44 No matrix
Leonurus japonicusLamioideae · Leonurus Stable locus 44 No matrix
Mosla chinensisNepetoideae · Mosla Stable locus 44 No matrix
Ocimum tenuiflorumNepetoideae · Ocimum Stable locus 44 No matrix
Origanum vulgareNepetoideae · Origanum Stable locus 44 No matrix
Rotheca myricoidesAjugoideae · Rotheca Stable locus 44 No matrix
Salvia bowleyanaNepetoideae · Salvia Stable locus 44 No matrix
Scutellaria baicalensisScutellarioideae · Scutellaria Stable locus 44 No matrix
Tectona grandisTectonoideae · Tectona Stable locus 44 Available
Ajuga reptansAjugoideae · Ajuga Stable locus 33 No matrix
Glechoma longitubaNepetoideae · Glechoma Stable locus 33 No matrix
Leonotis leonurusLamioideae · Leonotis Stable locus 33 No matrix
Marmoritis complanataNepetoideae · Marmoritis Stable locus 33 No matrix
Mosla soochowensisNepetoideae · Mosla Stable locus 33 No matrix
Salvia divinorumNepetoideae · Salvia Stable locus 33 No matrix
Salvia miltiorrhizaNepetoideae · Salvia Stable locus 33 Available
Isodon lophanthoidesNepetoideae · Isodon Stable locus 22 No matrix
Isodon serraNepetoideae · Isodon Stable locus 22 No matrix
Perilla citriodoraNepetoideae · Perilla Stable locus 22 No matrix
Perilla frutescens var. hirtellaNepetoideae · Perilla Stable locus 22 No matrix
Salvia sclareaNepetoideae · Salvia Stable locus 22 No matrix
Schizonepeta tenuifoliaNepetoideae · Schizonepeta Stable locus 22 No matrix
Thymus quinquecostatusNepetoideae · Thymus Stable locus 22 No matrix
Mentha longifoliaNepetoideae · Mentha Stable locus 11 Available

Candidate records

Traceable candidate identifiers

Filter and inspect candidate identifiers for this family.

Clear
Candidate IDSpeciesPathway / familyEvidenceConfidenceIdentityHMM score
LECA_c37358_g1_i1_len_253
Leonurus cardiacaAlkaloid · SLSblast Medium 52.5%—
LECA_c46283_g1_i1_len_310
Leonurus cardiacaAlkaloid · SLSblast Medium 50.7%—
LELE_c28011_g1_i1_len_406
Leonotis leonurusAlkaloid · SLSblast Medium 44.9%—
LELE_c30261_g1_i6_len_1283
Leonotis leonurusAlkaloid · SLSblast Medium 35.5%—
LELE_c74526_g1_i1_len_748
Leonotis leonurusAlkaloid · SLSblast Medium 34.8%—
LYAM_c20199_g1_i1_len_315
Lycopus americanusAlkaloid · SLSblast Medium 45.8%—
LYAM_c26389_g1_i1_len_957
Lycopus americanusAlkaloid · SLSblast Medium 40.5%—
LYAM_c29822_g1_i1_len_482
Lycopus americanusAlkaloid · SLSblast Medium 51.6%—
LYAM_c33157_g2_i3_len_2236
Lycopus americanusAlkaloid · SLSblast Medium 60.6%—
LYAM_c41813_g1_i1_len_453
Lycopus americanusAlkaloid · SLSblast Medium 37.5%—
LYAM_c4680_g1_i2_len_877
Lycopus americanusAlkaloid · SLSblast Medium 64.8%—
Lj2g15510.1
Leonurus japonicusAlkaloid · SLSblast Medium 30.6%—
Lj7g01300.1
Leonurus japonicusAlkaloid · SLSblast Medium 56.1%—
Lj7g13150.1
Leonurus japonicusAlkaloid · SLSblast Medium 48.9%—
Lj7g17230.1
Leonurus japonicusAlkaloid · SLSblast Medium 38.9%—
Ls2g14180.1
Leonurus sibiricusAlkaloid · SLSblast Medium 30.4%—
Ls5g04210.1
Leonurus sibiricusAlkaloid · SLSblast Medium 39.3%—
Ls5g23360.1
Leonurus sibiricusAlkaloid · SLSblast Medium 48.4%—
Ls5g29990.1
Leonurus sibiricusAlkaloid · SLSblast Medium 51.4%—
Ls5g34760.1
Leonurus sibiricusAlkaloid · SLSblast Medium 56.7%—
MACO_g1777.t1
Marmoritis complanataAlkaloid · SLSblast Medium 48.2%—
MACO_g18077.t1
Marmoritis complanataAlkaloid · SLSblast Medium 30.3%—
MACO_g4187.t1
Marmoritis complanataAlkaloid · SLSblast Medium 65.3%—
MAVU_c13046_g1_i1_len_1825
Marrubium vulgareAlkaloid · SLSblast Medium 46.5%—
MAVU_c20417_g1_i1_len_369
Marrubium vulgareAlkaloid · SLSblast Medium 35.8%—
MAVU_c22481_g1_i1_len_375
Marrubium vulgareAlkaloid · SLSblast Medium 43.9%—
MAVU_c26740_g1_i1_len_1354
Marrubium vulgareAlkaloid · SLSblast Medium 58.1%—
MAVU_c27711_g1_i1_len_2013
Marrubium vulgareAlkaloid · SLSblast Medium 34.4%—
MAVU_c30416_g1_i2_len_2457
Marrubium vulgareAlkaloid · SLSblast Medium 59.7%—
MAVU_c31422_g1_i1_len_1898
Marrubium vulgareAlkaloid · SLSblast Medium 30.8%—
MAVU_c31756_g4_i3_len_1612
Marrubium vulgareAlkaloid · SLSblast Medium 43.3%—
MAVU_c36302_g1_i1_len_535
Marrubium vulgareAlkaloid · SLSblast Medium 37.7%—
MAVU_c9345_g1_i1_len_997
Marrubium vulgareAlkaloid · SLSblast Medium 31.3%—
MEOF_c11423_g1_i2_len_591
Melissa officinalisAlkaloid · SLSblast Medium 34.5%—
MEOF_c18929_g1_i1_len_2041
Melissa officinalisAlkaloid · SLSblast Medium 30.4%—
MEOF_c50052_g1_i1_len_306
Melissa officinalisAlkaloid · SLSblast Medium 39.2%—
MEOF_c5301_g1_i1_len_261
Melissa officinalisAlkaloid · SLSblast Medium 46.7%—
MEOF_c58619_g1_i1_len_336
Melissa officinalisAlkaloid · SLSblast Medium 54.2%—
MEPI_c18833_g1_i1_len_281
Mentha x piperitaAlkaloid · SLSblast Medium 41.2%—
MEPI_c20477_g1_i1_len_372
Mentha x piperitaAlkaloid · SLSblast Medium 66.3%—
MEPI_c38855_g1_i1_len_443
Mentha x piperitaAlkaloid · SLSblast Medium 40.9%—
MEPI_c42204_g1_i1_len_967
Mentha x piperitaAlkaloid · SLSblast Medium 64.8%—
MEPI_c45082_g1_i1_len_405
Mentha x piperitaAlkaloid · SLSblast Medium 41.7%—
MEPI_c50156_g4_i1_len_521
Mentha x piperitaAlkaloid · SLSblast Medium 51.8%—
MEPI_c50219_g1_i1_len_557
Mentha x piperitaAlkaloid · SLSblast Medium 33.2%—
MEPI_c54895_g1_i3_len_1825
Mentha x piperitaAlkaloid · SLSblast Medium 30.9%—
MEPI_c59103_g1_i2_len_1806
Mentha x piperitaAlkaloid · SLSblast Medium 32.1%—
MEPI_c66320_g1_i1_len_264
Mentha x piperitaAlkaloid · SLSblast Medium 43.8%—
MEPI_c75203_g1_i1_len_374
Mentha x piperitaAlkaloid · SLSblast Medium 67.8%—
MESP_c23498_g1_i1_len_488
Mentha spicataAlkaloid · SLSblast Medium 57.9%—