C4H Family · LamiOmicsDB

Evidence profile

Available evidence layers

◆Candidate identifiers3,123 public species-linked identifiers can be inspected.

GTGene-tree workflow0 comparable source candidates; 0 high-confidence source calls.

MMotif-screen proxy0 motif-screen candidates; 0 with all required motif proxies.

100 kbLocal clustering proxy0 clusters across 0 species; maximum cluster size 0.

Comparative signature

Lamiaceae comparison fields

Rate delta: -0.012 · lower in Lamiaceae
Prevalence delta: 0
Comparable source: PlantSME family assignments
Comparable source count: 3,978
Public candidate count: 3,123
Evidence mode: plantsme

Species coverage

Assignment and locus coverage by species

Source family counts and public candidate identifiers are shown in separate columns.

Species	Evidence state	Source count	Candidate IDs	Expression
Pogostemon cablinLamioideae · Pogostemon	Stable locus	173	50	Available
Elsholtzia splendensNepetoideae · Elsholtzia	Stable locus	138	50	No matrix
Ocimum basilicumNepetoideae · Ocimum	Stable locus	125	50	Available
Salvia splendensNepetoideae · Salvia	Stable locus	124	50	No matrix
Teucrium chamaedrysAjugoideae · Teucrium	Stable locus	123	50	No matrix
Nepeta catariaNepetoideae · Nepeta	Stable locus	106	50	Available
Stenogyne calaminthoidesLamioideae · Stenogyne	Stable locus	84	50	No matrix
Teucrium marumAjugoideae · Teucrium	Stable locus	84	50	No matrix
Callicarpa americanaCallicarpoideae · Callicarpa	Stable locus	81	50	No matrix
Salvia rosmarinusNepetoideae · Salvia	Stable locus	81	50	Available
Salvia hispanicaNepetoideae · Salvia	Stable locus	80	50	No matrix
Hyssopus officinalisNepetoideae · Hyssopus	Stable locus	72	50	No matrix
Phlomoides rotataLamioideae · Phlomoides	Stable locus	72	50	No matrix
Perilla frutescensNepetoideae · Perilla	Stable locus	71	50	No matrix
Clinopodium barosmumNepetoideae · Clinopodium	Stable locus	70	50	No matrix
Tectona grandisTectonoideae · Tectona	Stable locus	70	50	Available
Nepeta mussiniiNepetoideae · Nepeta	Stable locus	68	50	Available
Salvia divinorumNepetoideae · Salvia	Stable locus	68	50	No matrix
Prunella vulgarisNepetoideae · Prunella	Stable locus	63	50	No matrix
Mosla soochowensisNepetoideae · Mosla	Stable locus	60	50	No matrix
Scutellaria baicalensisScutellarioideae · Scutellaria	Stable locus	57	50	No matrix
Ajuga decumbensAjugoideae · Ajuga	Stable locus	56	50	No matrix
Mosla chinensisNepetoideae · Mosla	Stable locus	56	50	No matrix
Origanum vulgareNepetoideae · Origanum	Stable locus	54	50	No matrix
Salvia bowleyanaNepetoideae · Salvia	Stable locus	54	50	No matrix
Salvia miltiorrhizaNepetoideae · Salvia	Stable locus	54	50	Available
Drepanocaryum sewerzowiiNepetoideae · Drepanocaryum	Stable locus	53	50	No matrix
Glechoma longitubaNepetoideae · Glechoma	Stable locus	53	50	No matrix
Clinopodium gracileNepetoideae · Clinopodium	Stable locus	52	50	No matrix
Cornutia pyramidataPremnoideae · Cornutia	Stable locus	52	50	No matrix
Callicarpa nudifloraCallicarpoideae · Callicarpa	Stable locus	51	50	No matrix
Isodon lophanthoidesNepetoideae · Isodon	Stable locus	50	50	No matrix
Thymus quinquecostatusNepetoideae · Thymus	Stable locus	50	50	No matrix
Ocimum tenuiflorumNepetoideae · Ocimum	Stable locus	49	49	No matrix
Agastache rugosaNepetoideae · Agastache	Stable locus	48	48	No matrix
Dracocephalum rupestreNepetoideae · Dracocephalum	Stable locus	46	46	No matrix
Marmoritis complanataNepetoideae · Marmoritis	Stable locus	45	45	No matrix
Perilla citriodoraNepetoideae · Perilla	Stable locus	43	43	No matrix
Perilla frutescens var. hirtellaNepetoideae · Perilla	Stable locus	43	43	No matrix
Isodon serraNepetoideae · Isodon	Stable locus	42	42	No matrix
Hyptis suaveolensNepetoideae · Hyptis	Stable locus	41	41	No matrix
Scutellaria barbataScutellarioideae · Scutellaria	Stable locus	41	41	No matrix
Rotheca myricoidesAjugoideae · Rotheca	Stable locus	40	40	No matrix
Leonurus japonicusLamioideae · Leonurus	Stable locus	39	39	No matrix
Leonurus sibiricusLamioideae · Leonurus	Stable locus	37	37	No matrix
Salvia sclareaNepetoideae · Salvia	Stable locus	37	37	No matrix
Plectranthus barbatusNepetoideae · Plectranthus	Stable locus	35	35	No matrix
Glechoma hederaceaNepetoideae · Glechoma	Stable locus	34	34	No matrix
Perovskia atriplicifoliaNepetoideae · Perovskia	Stable locus	34	34	No matrix
Schizonepeta tenuifoliaNepetoideae · Schizonepeta	Stable locus	34	34	No matrix
Clerodendrum bungeiAjugoideae · Clerodendrum	Stable locus	33	33	No matrix
Lavandula angustifoliaNepetoideae · Lavandula	Stable locus	33	33	No matrix
Lycopus americanusNepetoideae · Lycopus	Stable locus	33	33	No matrix
Salvia officinalisNepetoideae · Salvia	Stable locus	32	32	No matrix
Holmskioldia sanguineaScutellarioideae · Holmskioldia	Stable locus	31	31	No matrix
Origanum majoranaNepetoideae · Origanum	Stable locus	31	31	No matrix
Prostanthera lasianthosProstantheroideae · Prostanthera	Stable locus	30	30	No matrix
Agastache foeniculumNepetoideae · Agastache	Stable locus	29	29	No matrix
Stachys officinalisLamioideae · Stachys	Stable locus	29	29	No matrix
Thymus vulgarisNepetoideae · Thymus	Stable locus	29	29	No matrix
Mentha x piperitaNepetoideae · Mentha	Stable locus	28	28	No matrix
Premna microphyllaPremnoideae · Premna	Stable locus	27	27	No matrix
Westringia fruticosaProstantheroideae · Westringia	Stable locus	27	27	No matrix
Ajuga reptansAjugoideae · Ajuga	Stable locus	26	26	No matrix
Collinsonia canadensisNepetoideae · Collinsonia	Stable locus	26	26	No matrix
Petraeovitex bambusetoriumPeronematoideae · Petraeovitex	Stable locus	26	26	No matrix
Phlomis fruticosaLamioideae · Phlomis	Stable locus	26	26	No matrix
Ballota pseudodictamnusLamioideae · Ballota	Stable locus	25	25	No matrix
Congea tomentosaSymphorematoideae · Congea	Stable locus	25	25	No matrix
Monarda didymaNepetoideae · Monarda	Stable locus	25	25	No matrix
Lamium albumLamioideae · Lamium	Stable locus	24	24	No matrix
Marrubium vulgareLamioideae · Marrubium	Stable locus	23	23	No matrix
Mentha spicataNepetoideae · Mentha	Stable locus	23	23	No matrix
Gmelina philippensisPremnoideae · Gmelina	Stable locus	22	22	No matrix
Teucrium canadenseAjugoideae · Teucrium	Stable locus	22	22	No matrix
Vitex agnus-castusViticoideae · Vitex	Stable locus	22	22	No matrix
Melissa officinalisNepetoideae · Melissa	Stable locus	21	21	No matrix
Mentha longifoliaNepetoideae · Mentha	Stable locus	21	21	Available
Leonotis leonurusLamioideae · Leonotis	Stable locus	18	18	No matrix
Leonurus cardiacaLamioideae · Leonurus	Stable locus	18	18	No matrix

Candidate records

Traceable candidate identifiers

Filter and inspect candidate identifiers for this family.

Candidate ID	Species	Pathway / family	Evidence	Confidence	Identity	HMM score
Roff10240023240	Salvia rosmarinus	Flavonoid · `C4H`	hmm	Medium	—	224.2
380.g78.t1	Ocimum basilicum	Flavonoid · `C4H`	hmm	Medium	—	224.1
HOSA_c49923_g2_i2_len_2662	Holmskioldia sanguinea	Flavonoid · `C4H`	hmm	Medium	—	224.1
MODI_c34143_g1_i1_len_1511	Monarda didyma	Flavonoid · `C4H`	hmm	Medium	—	224.1
g4190.t1	Ajuga decumbens	Flavonoid · `C4H`	hmm	Medium	—	224.1
scutellaria_barbata_GWHPAOTP008339	Scutellaria barbata	Flavonoid · `C4H`	hmm	Medium	—	224.1
MESP_c45347_g2_i1_len_2046	Mentha spicata	Flavonoid · `C4H`	hmm	Medium	—	224.0
PRLA_c70522_g1_i2_len_2139	Prostanthera lasianthos	Flavonoid · `C4H`	hmm	Medium	—	223.9
g26009.t1	Hyssopus officinalis	Flavonoid · `C4H`	hmm	Medium	—	223.8
PEBA_c33334_g1_i1_len_2288	Petraeovitex bambusetorium	Flavonoid · `C4H`	hmm	Medium	—	223.7
Mlonscaffold_6_length_375374740138460.1.v1.326	Mentha longifolia	Flavonoid · `C4H`	hmm	Medium	—	223.5
ORMA_c51509_g1_i1_len_4053	Origanum majorana	Flavonoid · `C4H`	hmm	Medium	—	223.5
evm.model.chr3.1108	Prunella vulgaris	Flavonoid · `C4H`	hmm	Medium	—	223.4
Dru_1G0035310.1	Dracocephalum rupestre	Flavonoid · `C4H`	hmm	Medium	—	223.3
CLBU_c50582_g1_i1_len_2617	Clerodendrum bungei	Flavonoid · `C4H`	hmm	Medium	—	223.2
PHFR_c72916_g2_i1_len_2452	Phlomis fruticosa	Flavonoid · `C4H`	hmm	Medium	—	223.0
scutellaria_barbata_GWHPAOTP002939	Scutellaria barbata	Flavonoid · `C4H`	hmm	Medium	—	223.0
Dru_5G0024380.1	Dracocephalum rupestre	Flavonoid · `C4H`	hmm	Medium	—	222.9
PEAT_c25052_g1_i2_len_1589	Perovskia atriplicifolia	Flavonoid · `C4H`	hmm	Medium	—	222.9
evm.model.LG01.2564	Clinopodium barosmum	Flavonoid · `C4H`	hmm	Medium	—	222.9
KAL8526381.1	Phlomoides rotata	Flavonoid · `C4H`	hmm	Medium	—	222.8
DRSE_g22625.t1	Drepanocaryum sewerzowii	Flavonoid · `C4H`	hmm	Medium	—	222.7
evm.model.chr5.1887	Prunella vulgaris	Flavonoid · `C4H`	hmm	Medium	—	222.7
Lj5g00940.1	Leonurus japonicus	Flavonoid · `C4H`	hmm	Medium	—	222.6
HYSU_c28798_g1_i2_len_2113	Hyptis suaveolens	Flavonoid · `C4H`	hmm	Medium	—	222.5
Sch000016681	Schizonepeta tenuifolia	Flavonoid · `C4H`	hmm	Medium	—	222.4
MACO_g11107.t1	Marmoritis complanata	Flavonoid · `C4H`	hmm	Medium	—	222.3
origanum_vulgare_296.g4.t1	Origanum vulgare	Flavonoid · `C4H`	hmm	Medium	—	222.3
SAOF_c26605_g1_i1_len_1362	Salvia officinalis	Flavonoid · `C4H`	hmm	Medium	—	222.2
GMPH_c22548_g1_i1_len_2404	Gmelina philippensis	Flavonoid · `C4H`	hmm	Medium	—	222.1
Es4B.G221700.t1	Elsholtzia splendens	Flavonoid · `C4H`	hmm	Medium	—	222.0
PEAT_c30000_g1_i2_len_1579	Perovskia atriplicifolia	Flavonoid · `C4H`	hmm	Medium	—	222.0
Stenogyne_calaminthoides__EVM_prediction_HiC_scaffold_10.1621.mRNA1	Stenogyne calaminthoides	Flavonoid · `C4H`	hmm	Medium	—	222.0
COTO_c39076_g4_i1_len_1482	Congea tomentosa	Flavonoid · `C4H`	hmm	Medium	—	221.9
Stenogyne_calaminthoides__EVM_prediction_HiC_scaffold_39.17.mRNA1	Stenogyne calaminthoides	Flavonoid · `C4H`	hmm	Medium	—	221.9
scutellaria_barbata_GWHPAOTP005708	Scutellaria barbata	Flavonoid · `C4H`	hmm	Medium	—	221.9
KAL1552985.1	Salvia divinorum	Flavonoid · `C4H`	hmm	Medium	—	221.8
MEOF_c10999_g1_i1_len_1858	Melissa officinalis	Flavonoid · `C4H`	hmm	Medium	—	221.8
XP_042055078.1	Salvia splendens	Flavonoid · `C4H`	hmm	Medium	—	221.8
COPY_c76877_g1_i3_len_2968	Cornutia pyramidata	Flavonoid · `C4H`	hmm	Medium	—	221.7
PLBA_c40463_g4_i2_len_1759	Plectranthus barbatus	Flavonoid · `C4H`	hmm	Medium	—	221.7
Sbai3P152T46.1	Scutellaria baicalensis	Flavonoid · `C4H`	hmm	Medium	—	221.7
g9601.t1	Nepeta mussinii	Flavonoid · `C4H`	hmm	Medium	—	221.7
g9601.t1.1.5b2c7c7d	Nepeta mussinii	Flavonoid · `C4H`	hmm	Medium	—	221.7
g9601.t1.2.5b2c7c7d	Nepeta mussinii	Flavonoid · `C4H`	hmm	Medium	—	221.7
MEOF_c10743_g1_i1_len_2292	Melissa officinalis	Flavonoid · `C4H`	hmm	Medium	—	221.4
g5.t1	Nepeta cataria	Flavonoid · `C4H`	hmm	Medium	—	221.4
g5.t1.1.5b2d4a22	Nepeta cataria	Flavonoid · `C4H`	hmm	Medium	—	221.4
MACO_g15478.t1	Marmoritis complanata	Flavonoid · `C4H`	hmm	Medium	—	221.3
899.g82.t1	Ocimum basilicum	Flavonoid · `C4H`	hmm	Medium	—	221.2