LamiOmicsDB Lamiaceae Multi-Omics Database
v1 808 species · 3 phylogenies · 6,313 sequences

Pathway-family scientific record

F3H

Flavanone 3-hydroxylase family

This module includes PlantSME enzyme-family assignments and traceable candidate protein identifiers from genome-derived or transcriptome-derived protein sets.

Browse candidatesCompare speciesCSV
Stable locus plantsmeFlavonoid biosynthesis
Public candidate IDs
3,407
Species with candidates
80
Species with assignments
80
Source assignments
4,272
Gene-tree candidates
0
Motif candidates
0

Evidence profile

Available evidence layers

◆Candidate identifiers3,407 public species-linked identifiers can be inspected.
GTGene-tree workflow0 comparable source candidates; 0 high-confidence source calls.
MMotif-screen proxy0 motif-screen candidates; 0 with all required motif proxies.
100 kbLocal clustering proxy0 clusters across 0 species; maximum cluster size 0.

Comparative signature

Lamiaceae comparison fields

Rate delta
Not calculated
Prevalence delta
Not calculated
Comparable source
PlantSME family assignments
Comparable source count
4,272
Public candidate count
3,407
Evidence mode
plantsme

Species coverage

Assignment and locus coverage by species

Source family counts and public candidate identifiers are shown in separate columns.

SpeciesEvidence stateSource countCandidate IDsExpression
Pogostemon cablinLamioideae · Pogostemon Stable locus 21950 Available
Salvia splendensNepetoideae · Salvia Stable locus 17250 No matrix
Teucrium chamaedrysAjugoideae · Teucrium Stable locus 15650 No matrix
Ocimum basilicumNepetoideae · Ocimum Stable locus 12450 Available
Elsholtzia splendensNepetoideae · Elsholtzia Stable locus 8950 No matrix
Salvia rosmarinusNepetoideae · Salvia Stable locus 8850 Available
Teucrium marumAjugoideae · Teucrium Stable locus 8750 No matrix
Nepeta catariaNepetoideae · Nepeta Stable locus 8550 Available
Callicarpa americanaCallicarpoideae · Callicarpa Stable locus 8350 No matrix
Clinopodium barosmumNepetoideae · Clinopodium Stable locus 8250 No matrix
Salvia hispanicaNepetoideae · Salvia Stable locus 8050 No matrix
Perilla frutescensNepetoideae · Perilla Stable locus 7950 No matrix
Phlomoides rotataLamioideae · Phlomoides Stable locus 7250 No matrix
Salvia divinorumNepetoideae · Salvia Stable locus 7050 No matrix
Prunella vulgarisNepetoideae · Prunella Stable locus 6550 No matrix
Hyssopus officinalisNepetoideae · Hyssopus Stable locus 6450 No matrix
Ocimum tenuiflorumNepetoideae · Ocimum Stable locus 6350 No matrix
Stenogyne calaminthoidesLamioideae · Stenogyne Stable locus 6250 No matrix
Dracocephalum rupestreNepetoideae · Dracocephalum Stable locus 5950 No matrix
Nepeta mussiniiNepetoideae · Nepeta Stable locus 5850 Available
Callicarpa nudifloraCallicarpoideae · Callicarpa Stable locus 5350 No matrix
Origanum vulgareNepetoideae · Origanum Stable locus 5350 No matrix
Tectona grandisTectonoideae · Tectona Stable locus 5250 Available
Mosla soochowensisNepetoideae · Mosla Stable locus 5050 No matrix
Ajuga decumbensAjugoideae · Ajuga Stable locus 4949 No matrix
Mosla chinensisNepetoideae · Mosla Stable locus 4848 No matrix
Ballota pseudodictamnusLamioideae · Ballota Stable locus 4747 No matrix
Marmoritis complanataNepetoideae · Marmoritis Stable locus 4747 No matrix
Perilla citriodoraNepetoideae · Perilla Stable locus 4646 No matrix
Perilla frutescens var. hirtellaNepetoideae · Perilla Stable locus 4646 No matrix
Premna microphyllaPremnoideae · Premna Stable locus 4646 No matrix
Cornutia pyramidataPremnoideae · Cornutia Stable locus 4545 No matrix
Thymus quinquecostatusNepetoideae · Thymus Stable locus 4545 No matrix
Clinopodium gracileNepetoideae · Clinopodium Stable locus 4343 No matrix
Drepanocaryum sewerzowiiNepetoideae · Drepanocaryum Stable locus 4343 No matrix
Mentha longifoliaNepetoideae · Mentha Stable locus 4343 Available
Salvia miltiorrhizaNepetoideae · Salvia Stable locus 4343 Available
Agastache rugosaNepetoideae · Agastache Stable locus 4242 No matrix
Glechoma longitubaNepetoideae · Glechoma Stable locus 4242 No matrix
Origanum majoranaNepetoideae · Origanum Stable locus 4242 No matrix
Collinsonia canadensisNepetoideae · Collinsonia Stable locus 4141 No matrix
Leonotis leonurusLamioideae · Leonotis Stable locus 4141 No matrix
Plectranthus barbatusNepetoideae · Plectranthus Stable locus 4141 No matrix
Rotheca myricoidesAjugoideae · Rotheca Stable locus 4141 No matrix
Hyptis suaveolensNepetoideae · Hyptis Stable locus 4040 No matrix
Lycopus americanusNepetoideae · Lycopus Stable locus 4040 No matrix
Petraeovitex bambusetoriumPeronematoideae · Petraeovitex Stable locus 4040 No matrix
Agastache foeniculumNepetoideae · Agastache Stable locus 3939 No matrix
Glechoma hederaceaNepetoideae · Glechoma Stable locus 3939 No matrix
Leonurus sibiricusLamioideae · Leonurus Stable locus 3939 No matrix
Melissa officinalisNepetoideae · Melissa Stable locus 3939 No matrix
Mentha spicataNepetoideae · Mentha Stable locus 3939 No matrix
Salvia sclareaNepetoideae · Salvia Stable locus 3939 No matrix
Scutellaria barbataScutellarioideae · Scutellaria Stable locus 3939 No matrix
Marrubium vulgareLamioideae · Marrubium Stable locus 3838 No matrix
Phlomis fruticosaLamioideae · Phlomis Stable locus 3838 No matrix
Salvia officinalisNepetoideae · Salvia Stable locus 3838 No matrix
Schizonepeta tenuifoliaNepetoideae · Schizonepeta Stable locus 3838 No matrix
Gmelina philippensisPremnoideae · Gmelina Stable locus 3737 No matrix
Lamium albumLamioideae · Lamium Stable locus 3737 No matrix
Leonurus cardiacaLamioideae · Leonurus Stable locus 3737 No matrix
Leonurus japonicusLamioideae · Leonurus Stable locus 3737 No matrix
Stachys officinalisLamioideae · Stachys Stable locus 3737 No matrix
Thymus vulgarisNepetoideae · Thymus Stable locus 3737 No matrix
Ajuga reptansAjugoideae · Ajuga Stable locus 3636 No matrix
Clerodendrum bungeiAjugoideae · Clerodendrum Stable locus 3636 No matrix
Isodon serraNepetoideae · Isodon Stable locus 3636 No matrix
Mentha x piperitaNepetoideae · Mentha Stable locus 3636 No matrix
Monarda didymaNepetoideae · Monarda Stable locus 3636 No matrix
Perovskia atriplicifoliaNepetoideae · Perovskia Stable locus 3636 No matrix
Teucrium canadenseAjugoideae · Teucrium Stable locus 3636 No matrix
Westringia fruticosaProstantheroideae · Westringia Stable locus 3636 No matrix
Congea tomentosaSymphorematoideae · Congea Stable locus 3535 No matrix
Isodon lophanthoidesNepetoideae · Isodon Stable locus 3535 No matrix
Salvia bowleyanaNepetoideae · Salvia Stable locus 3535 No matrix
Scutellaria baicalensisScutellarioideae · Scutellaria Stable locus 3535 No matrix
Lavandula angustifoliaNepetoideae · Lavandula Stable locus 3434 No matrix
Vitex agnus-castusViticoideae · Vitex Stable locus 3434 No matrix
Holmskioldia sanguineaScutellarioideae · Holmskioldia Stable locus 3333 No matrix
Prostanthera lasianthosProstantheroideae · Prostanthera Stable locus 3030 No matrix

Candidate records

Traceable candidate identifiers

Filter and inspect candidate identifiers for this family.

Clear
Candidate IDSpeciesPathway / familyEvidenceConfidenceIdentityHMM score
Clgra_028548-T1
Clinopodium gracileFlavonoid · F3Hblast Medium 57.2%—
Clgra_029153-T1
Clinopodium gracileFlavonoid · F3Hblast Medium 50.6%—
Clgra_029264-T1
Clinopodium gracileFlavonoid · F3Hblast Medium 37.1%—
Clgra_030403-T1
Clinopodium gracileFlavonoid · F3Hblast Medium 58.3%—
Clgra_030561-T1
Clinopodium gracileFlavonoid · F3Hblast Medium 52.9%—
Clgra_032313-T1
Clinopodium gracileFlavonoid · F3Hblast Medium 50.9%—
Clgra_032377-T1
Clinopodium gracileFlavonoid · F3Hblast Medium 51.8%—
Clgra_032676-T1
Clinopodium gracileFlavonoid · F3Hblast Medium 46.1%—
Clgra_032792-T1
Clinopodium gracileFlavonoid · F3Hblast Medium 52.1%—
Clgra_034917-T1
Clinopodium gracileFlavonoid · F3Hblast Medium 47.6%—
Clgra_035707-T1
Clinopodium gracileFlavonoid · F3Hblast Medium 51.3%—
Clgra_036378-T1
Clinopodium gracileFlavonoid · F3Hblast Medium 39.0%—
Clgra_039444-T1
Clinopodium gracileFlavonoid · F3Hblast Medium 82.8%—
DRSE_g10287.t1
Drepanocaryum sewerzowiiFlavonoid · F3Hblast Medium 46.2%—
DRSE_g10288.t1
Drepanocaryum sewerzowiiFlavonoid · F3Hblast Medium 75.0%—
DRSE_g1044.t1
Drepanocaryum sewerzowiiFlavonoid · F3Hblast Medium 47.7%—
DRSE_g10690.t1
Drepanocaryum sewerzowiiFlavonoid · F3Hblast Medium 53.6%—
DRSE_g10750.t1
Drepanocaryum sewerzowiiFlavonoid · F3Hblast Medium 51.0%—
DRSE_g10852.t1
Drepanocaryum sewerzowiiFlavonoid · F3Hblast Medium 58.5%—
DRSE_g11182.t1
Drepanocaryum sewerzowiiFlavonoid · F3Hblast Medium 57.8%—
DRSE_g11367.t1
Drepanocaryum sewerzowiiFlavonoid · F3Hblast Medium 49.1%—
DRSE_g11664.t1
Drepanocaryum sewerzowiiFlavonoid · F3Hblast Medium 45.4%—
DRSE_g11847.t1
Drepanocaryum sewerzowiiFlavonoid · F3Hblast Medium 57.8%—
DRSE_g14014.t1
Drepanocaryum sewerzowiiFlavonoid · F3Hblast Medium 48.8%—
DRSE_g14419.t1
Drepanocaryum sewerzowiiFlavonoid · F3Hblast Medium 44.2%—
DRSE_g15243.t1
Drepanocaryum sewerzowiiFlavonoid · F3Hblast Medium 45.3%—
DRSE_g15357.t1
Drepanocaryum sewerzowiiFlavonoid · F3Hblast Medium 46.5%—
DRSE_g15430.t1
Drepanocaryum sewerzowiiFlavonoid · F3Hblast Medium 38.8%—
DRSE_g15602.t1
Drepanocaryum sewerzowiiFlavonoid · F3Hblast Medium 45.0%—
DRSE_g15679.t1
Drepanocaryum sewerzowiiFlavonoid · F3Hblast Medium 51.8%—
DRSE_g15990.t1
Drepanocaryum sewerzowiiFlavonoid · F3Hblast Medium 52.1%—
DRSE_g16081.t1
Drepanocaryum sewerzowiiFlavonoid · F3Hblast Medium 47.5%—
DRSE_g17765.t1
Drepanocaryum sewerzowiiFlavonoid · F3Hblast Medium 46.1%—
DRSE_g17812.t1
Drepanocaryum sewerzowiiFlavonoid · F3Hblast Medium 43.2%—
DRSE_g1960.t1
Drepanocaryum sewerzowiiFlavonoid · F3Hblast Medium 36.0%—
DRSE_g21176.t1
Drepanocaryum sewerzowiiFlavonoid · F3Hblast Medium 46.6%—
DRSE_g21635.t1
Drepanocaryum sewerzowiiFlavonoid · F3Hblast Medium 47.6%—
DRSE_g23010.t1
Drepanocaryum sewerzowiiFlavonoid · F3Hblast Medium 50.6%—
DRSE_g23414.t1
Drepanocaryum sewerzowiiFlavonoid · F3Hblast Medium 56.9%—
DRSE_g23638.t1
Drepanocaryum sewerzowiiFlavonoid · F3Hblast Medium 52.4%—
DRSE_g2438.t1
Drepanocaryum sewerzowiiFlavonoid · F3Hblast Medium 42.1%—
DRSE_g2589.t1
Drepanocaryum sewerzowiiFlavonoid · F3Hblast Medium 45.9%—
DRSE_g2755.t1
Drepanocaryum sewerzowiiFlavonoid · F3Hblast Medium 46.2%—
DRSE_g3508.t1
Drepanocaryum sewerzowiiFlavonoid · F3Hblast Medium 37.1%—
DRSE_g3554.t1
Drepanocaryum sewerzowiiFlavonoid · F3Hblast Medium 50.6%—
DRSE_g3982.t1
Drepanocaryum sewerzowiiFlavonoid · F3Hblast Medium 36.5%—
DRSE_g6452.t1
Drepanocaryum sewerzowiiFlavonoid · F3Hblast Medium 50.0%—
DRSE_g7207.t1
Drepanocaryum sewerzowiiFlavonoid · F3Hblast Medium 45.7%—
DRSE_g7470.t1
Drepanocaryum sewerzowiiFlavonoid · F3Hblast Medium 42.1%—
DRSE_g7712.t1
Drepanocaryum sewerzowiiFlavonoid · F3Hblast Medium 46.6%—