LamiOmicsDB Lamiaceae Multi-Omics Database
v1 808 species · 3 phylogenies · 6,313 sequences

Pathway-family scientific record

C3H_CYP98A

p-coumaroyl-shikimate/quinate 3-hydroxylase (CYP98A) family

This module includes PlantSME enzyme-family assignments and traceable candidate protein identifiers from genome-derived or transcriptome-derived protein sets.

Browse candidatesCompare speciesCSV
Stable locus plantsmePhenylpropanoid biosynthesis
Public candidate IDs
3,953
Species with candidates
80
Species with assignments
80
Source assignments
6,818
Gene-tree candidates
0
Motif candidates
0

Evidence profile

Available evidence layers

◆Candidate identifiers3,953 public species-linked identifiers can be inspected.
GTGene-tree workflow0 comparable source candidates; 0 high-confidence source calls.
MMotif-screen proxy0 motif-screen candidates; 0 with all required motif proxies.
100 kbLocal clustering proxy0 clusters across 0 species; maximum cluster size 0.

Comparative signature

Lamiaceae comparison fields

Rate delta
Not calculated
Prevalence delta
Not calculated
Comparable source
PlantSME family assignments
Comparable source count
6,818
Public candidate count
3,953
Evidence mode
plantsme

Species coverage

Assignment and locus coverage by species

Source family counts and public candidate identifiers are shown in separate columns.

SpeciesEvidence stateSource countCandidate IDsExpression
Teucrium chamaedrysAjugoideae · Teucrium Stable locus 37350 No matrix
Pogostemon cablinLamioideae · Pogostemon Stable locus 26450 Available
Stenogyne calaminthoidesLamioideae · Stenogyne Stable locus 18050 No matrix
Teucrium marumAjugoideae · Teucrium Stable locus 17650 No matrix
Nepeta catariaNepetoideae · Nepeta Stable locus 16650 Available
Ocimum basilicumNepetoideae · Ocimum Stable locus 14850 Available
Elsholtzia splendensNepetoideae · Elsholtzia Stable locus 14250 No matrix
Callicarpa americanaCallicarpoideae · Callicarpa Stable locus 12450 No matrix
Cornutia pyramidataPremnoideae · Cornutia Stable locus 11350 No matrix
Salvia rosmarinusNepetoideae · Salvia Stable locus 11250 Available
Salvia splendensNepetoideae · Salvia Stable locus 10650 No matrix
Perilla frutescensNepetoideae · Perilla Stable locus 10250 No matrix
Nepeta mussiniiNepetoideae · Nepeta Stable locus 9850 Available
Phlomis fruticosaLamioideae · Phlomis Stable locus 9650 No matrix
Thymus vulgarisNepetoideae · Thymus Stable locus 9650 No matrix
Clinopodium gracileNepetoideae · Clinopodium Stable locus 9350 No matrix
Glechoma longitubaNepetoideae · Glechoma Stable locus 9250 No matrix
Ballota pseudodictamnusLamioideae · Ballota Stable locus 9050 No matrix
Clinopodium barosmumNepetoideae · Clinopodium Stable locus 8850 No matrix
Hyssopus officinalisNepetoideae · Hyssopus Stable locus 8750 No matrix
Phlomoides rotataLamioideae · Phlomoides Stable locus 8750 No matrix
Glechoma hederaceaNepetoideae · Glechoma Stable locus 8650 No matrix
Origanum majoranaNepetoideae · Origanum Stable locus 8650 No matrix
Plectranthus barbatusNepetoideae · Plectranthus Stable locus 8550 No matrix
Ajuga decumbensAjugoideae · Ajuga Stable locus 8450 No matrix
Mentha x piperitaNepetoideae · Mentha Stable locus 8450 No matrix
Stachys officinalisLamioideae · Stachys Stable locus 8250 No matrix
Prunella vulgarisNepetoideae · Prunella Stable locus 8150 No matrix
Scutellaria baicalensisScutellarioideae · Scutellaria Stable locus 8050 No matrix
Tectona grandisTectonoideae · Tectona Stable locus 8050 Available
Lavandula angustifoliaNepetoideae · Lavandula Stable locus 7950 No matrix
Mosla chinensisNepetoideae · Mosla Stable locus 7850 No matrix
Petraeovitex bambusetoriumPeronematoideae · Petraeovitex Stable locus 7850 No matrix
Teucrium canadenseAjugoideae · Teucrium Stable locus 7850 No matrix
Westringia fruticosaProstantheroideae · Westringia Stable locus 7850 No matrix
Collinsonia canadensisNepetoideae · Collinsonia Stable locus 7750 No matrix
Salvia divinorumNepetoideae · Salvia Stable locus 7750 No matrix
Salvia hispanicaNepetoideae · Salvia Stable locus 7750 No matrix
Vitex agnus-castusViticoideae · Vitex Stable locus 7750 No matrix
Perovskia atriplicifoliaNepetoideae · Perovskia Stable locus 7650 No matrix
Salvia bowleyanaNepetoideae · Salvia Stable locus 7650 No matrix
Rotheca myricoidesAjugoideae · Rotheca Stable locus 7550 No matrix
Isodon lophanthoidesNepetoideae · Isodon Stable locus 7450 No matrix
Ocimum tenuiflorumNepetoideae · Ocimum Stable locus 7450 No matrix
Ajuga reptansAjugoideae · Ajuga Stable locus 7350 No matrix
Clerodendrum bungeiAjugoideae · Clerodendrum Stable locus 7350 No matrix
Isodon serraNepetoideae · Isodon Stable locus 7350 No matrix
Lamium albumLamioideae · Lamium Stable locus 7250 No matrix
Marrubium vulgareLamioideae · Marrubium Stable locus 7250 No matrix
Melissa officinalisNepetoideae · Melissa Stable locus 7250 No matrix
Mosla soochowensisNepetoideae · Mosla Stable locus 6950 No matrix
Prostanthera lasianthosProstantheroideae · Prostanthera Stable locus 6950 No matrix
Origanum vulgareNepetoideae · Origanum Stable locus 6850 No matrix
Callicarpa nudifloraCallicarpoideae · Callicarpa Stable locus 6750 No matrix
Holmskioldia sanguineaScutellarioideae · Holmskioldia Stable locus 6650 No matrix
Premna microphyllaPremnoideae · Premna Stable locus 6650 No matrix
Scutellaria barbataScutellarioideae · Scutellaria Stable locus 6650 No matrix
Gmelina philippensisPremnoideae · Gmelina Stable locus 6550 No matrix
Lycopus americanusNepetoideae · Lycopus Stable locus 6450 No matrix
Salvia miltiorrhizaNepetoideae · Salvia Stable locus 6450 Available
Mentha spicataNepetoideae · Mentha Stable locus 6250 No matrix
Marmoritis complanataNepetoideae · Marmoritis Stable locus 6050 No matrix
Salvia officinalisNepetoideae · Salvia Stable locus 6050 No matrix
Agastache foeniculumNepetoideae · Agastache Stable locus 5950 No matrix
Dracocephalum rupestreNepetoideae · Dracocephalum Stable locus 5950 No matrix
Leonurus cardiacaLamioideae · Leonurus Stable locus 5950 No matrix
Congea tomentosaSymphorematoideae · Congea Stable locus 5850 No matrix
Hyptis suaveolensNepetoideae · Hyptis Stable locus 5850 No matrix
Perilla citriodoraNepetoideae · Perilla Stable locus 5750 No matrix
Perilla frutescens var. hirtellaNepetoideae · Perilla Stable locus 5750 No matrix
Thymus quinquecostatusNepetoideae · Thymus Stable locus 5650 No matrix
Leonurus japonicusLamioideae · Leonurus Stable locus 5550 No matrix
Leonotis leonurusLamioideae · Leonotis Stable locus 5450 No matrix
Agastache rugosaNepetoideae · Agastache Stable locus 5350 No matrix
Leonurus sibiricusLamioideae · Leonurus Stable locus 5250 No matrix
Schizonepeta tenuifoliaNepetoideae · Schizonepeta Stable locus 5250 No matrix
Monarda didymaNepetoideae · Monarda Stable locus 4545 No matrix
Mentha longifoliaNepetoideae · Mentha Stable locus 4242 Available
Drepanocaryum sewerzowiiNepetoideae · Drepanocaryum Stable locus 3737 No matrix
Salvia sclareaNepetoideae · Salvia Stable locus 2929 No matrix

Candidate records

Traceable candidate identifiers

Filter and inspect candidate identifiers for this family.

Clear
Candidate IDSpeciesPathway / familyEvidenceConfidenceIdentityHMM score
PHFR_c61768_g1_i1_len_935
Phlomis fruticosaPhenylpropanoid · C3H_CYP98Ablast+hmm High 30.9%255.6
Teucrium_chamaedrys__Tcha113658
Teucrium chamaedrysPhenylpropanoid · C3H_CYP98Ablast+hmm High 31.0%253.8
PEAT_c38412_g1_i1_len_805
Perovskia atriplicifoliaPhenylpropanoid · C3H_CYP98Ablast+hmm High 30.6%253.1
COPY_c121745_g1_i1_len_816
Cornutia pyramidataPhenylpropanoid · C3H_CYP98Ablast+hmm High 32.2%252.8
evm.model.LG03.963
Clinopodium barosmumPhenylpropanoid · C3H_CYP98Ablast+hmm High 32.1%251.4
PEAT_c28806_g1_i1_len_1412
Perovskia atriplicifoliaPhenylpropanoid · C3H_CYP98Ablast+hmm High 33.9%251.3
Sch000018990
Schizonepeta tenuifoliaPhenylpropanoid · C3H_CYP98Ablast+hmm High 38.7%251.2
374603.g1.t1
Ocimum basilicumPhenylpropanoid · C3H_CYP98Ablast+hmm High 30.1%250.2
g16280.t1.2.5b43bdbb
Hyssopus officinalisPhenylpropanoid · C3H_CYP98Ablast+hmm High 46.3%248.9
ORMA_c6726_g1_i1_len_740
Origanum majoranaPhenylpropanoid · C3H_CYP98Ablast+hmm High 31.4%248.8
Smil03G0017840.1.v1.484
Salvia miltiorrhizaPhenylpropanoid · C3H_CYP98Ablast+hmm High 30.3%248.7
g7922.t1
Ajuga decumbensPhenylpropanoid · C3H_CYP98Ablast+hmm High 30.4%246.6
LAAN_c57853_g2_i1_len_1680
Lavandula angustifoliaPhenylpropanoid · C3H_CYP98Ablast+hmm High 34.2%246.5
VIAG_c51086_g1_i1_len_1065
Vitex agnus-castusPhenylpropanoid · C3H_CYP98Ablast+hmm High 31.5%245.9
KAL1543453.1
Salvia divinorumPhenylpropanoid · C3H_CYP98Ablast+hmm High 31.5%244.1
g7922.t2
Ajuga decumbensPhenylpropanoid · C3H_CYP98Ablast+hmm High 30.4%243.7
THVU_c75445_g2_i1_len_955
Thymus vulgarisPhenylpropanoid · C3H_CYP98Ablast+hmm High 32.6%243.2
Pat_B04G135300.m1
Pogostemon cablinPhenylpropanoid · C3H_CYP98Ablast+hmm High 30.5%237.2
Dru_5G0023660.3
Dracocephalum rupestrePhenylpropanoid · C3H_CYP98Ablast+hmm High 34.0%234.7
THVU_c69361_g1_i1_len_2010
Thymus vulgarisPhenylpropanoid · C3H_CYP98Ablast+hmm High 31.0%232.0
ORMA_c38697_g1_i1_len_1252
Origanum majoranaPhenylpropanoid · C3H_CYP98Ablast+hmm High 31.4%230.8
CLBU_c40687_g1_i3_len_2703
Clerodendrum bungeiPhenylpropanoid · C3H_CYP98Ablast+hmm High 45.2%229.2
WEFR_c18462_g1_i1_len_910
Westringia fruticosaPhenylpropanoid · C3H_CYP98Ablast+hmm High 31.5%228.0
origanum_vulgare_125992.g1.t1
Origanum vulgarePhenylpropanoid · C3H_CYP98Ablast+hmm High 44.1%228.0
Teucrium_chamaedrys__Tcha195216
Teucrium chamaedrysPhenylpropanoid · C3H_CYP98Ablast+hmm High 34.8%227.6
MESP_c47249_g1_i1_len_628
Mentha spicataPhenylpropanoid · C3H_CYP98Ablast+hmm High 30.8%225.7
PLBA_c22755_g1_i1_len_807
Plectranthus barbatusPhenylpropanoid · C3H_CYP98Ablast+hmm High 32.7%223.9
GMPH_c14005_g1_i1_len_898
Gmelina philippensisPhenylpropanoid · C3H_CYP98Ablast+hmm High 31.7%222.9
PHFR_c43302_g1_i1_len_681
Phlomis fruticosaPhenylpropanoid · C3H_CYP98Ablast+hmm High 31.1%222.1
Teum.02G016620.2
Teucrium marumPhenylpropanoid · C3H_CYP98Ablast+hmm High 30.2%221.9
483490.g2.t1
Ocimum basilicumPhenylpropanoid · C3H_CYP98Ablast+hmm High 35.8%220.4
g50207.t1
Nepeta catariaPhenylpropanoid · C3H_CYP98Ablast+hmm High 34.2%219.7
ROMY_c46218_g1_i1_len_1193
Rotheca myricoidesPhenylpropanoid · C3H_CYP98Ablast+hmm High 30.2%218.5
evm.model.LG16.1346
Clinopodium barosmumPhenylpropanoid · C3H_CYP98Ablast+hmm High 30.6%217.4
GLHE_c63127_g1_i3_len_2096
Glechoma hederaceaPhenylpropanoid · C3H_CYP98Ablast+hmm High 30.7%215.9
Stenogyne_calaminthoides__EVM_prediction_HiC_scaffold_41.2303.mRNA1
Stenogyne calaminthoidesPhenylpropanoid · C3H_CYP98Ablast+hmm High 30.3%211.0
Teum.03G020130.1
Teucrium marumPhenylpropanoid · C3H_CYP98Ablast+hmm High 31.3%209.8
Teum.06G012500.1
Teucrium marumPhenylpropanoid · C3H_CYP98Ablast+hmm High 32.8%209.4
COCA_c59633_g1_i1_len_695
Collinsonia canadensisPhenylpropanoid · C3H_CYP98Ablast+hmm High 33.3%209.2
PLBA_c88590_g1_i1_len_469
Plectranthus barbatusPhenylpropanoid · C3H_CYP98Ablast+hmm High 36.1%208.8
Es4A.G080100.t1
Elsholtzia splendensPhenylpropanoid · C3H_CYP98Ablast+hmm High 30.5%208.5
Teucrium_chamaedrys__Tcha161867
Teucrium chamaedrysPhenylpropanoid · C3H_CYP98Ablast+hmm High 31.0%208.2
LAAL_c33561_g1_i2_len_554
Lamium albumPhenylpropanoid · C3H_CYP98Ablast+hmm High 35.2%202.7
CAame05G0032290.v1.94
Callicarpa americanaPhenylpropanoid · C3H_CYP98Ablast+hmm High 64.6%201.8
AJRE_c41799_g1_i1_len_784
Ajuga reptansPhenylpropanoid · C3H_CYP98Ablast+hmm High 32.1%201.0
Teum.06G008520.1
Teucrium marumPhenylpropanoid · C3H_CYP98Ablast+hmm High 31.0%197.1
LAAL_c33121_g2_i2_len_1018
Lamium albumPhenylpropanoid · C3H_CYP98Ablast+hmm High 31.6%196.5
WEFR_c35991_g1_i2_len_1998
Westringia fruticosaPhenylpropanoid · C3H_CYP98Ablast+hmm High 41.8%195.7
Teucrium_chamaedrys__Tcha5177
Teucrium chamaedrysPhenylpropanoid · C3H_CYP98Ablast+hmm High 30.1%194.7
ROMY_c407_g1_i1_len_652
Rotheca myricoidesPhenylpropanoid · C3H_CYP98Ablast+hmm High 34.0%193.4