LamiOmicsDB Lamiaceae Multi-Omics Database
v1 808 species · 3 phylogenies · 6,313 sequences

Pathway-family scientific record

C4H_CYP73A

Cinnamate 4-hydroxylase (CYP73A) family

This module includes PlantSME enzyme-family assignments and traceable candidate protein identifiers from genome-derived or transcriptome-derived protein sets.

Browse candidatesCompare speciesCSV
Stable locus plantsmePhenylpropanoid biosynthesis
Public candidate IDs
2,602
Species with candidates
80
Species with assignments
80
Source assignments
3,010
Gene-tree candidates
0
Motif candidates
0

Evidence profile

Available evidence layers

◆Candidate identifiers2,602 public species-linked identifiers can be inspected.
GTGene-tree workflow0 comparable source candidates; 0 high-confidence source calls.
MMotif-screen proxy0 motif-screen candidates; 0 with all required motif proxies.
100 kbLocal clustering proxy0 clusters across 0 species; maximum cluster size 0.

Comparative signature

Lamiaceae comparison fields

Rate delta
Not calculated
Prevalence delta
Not calculated
Comparable source
PlantSME family assignments
Comparable source count
3,010
Public candidate count
2,602
Evidence mode
plantsme

Species coverage

Assignment and locus coverage by species

Source family counts and public candidate identifiers are shown in separate columns.

SpeciesEvidence stateSource countCandidate IDsExpression
Pogostemon cablinLamioideae · Pogostemon Stable locus 11550 Available
Elsholtzia splendensNepetoideae · Elsholtzia Stable locus 11250 No matrix
Teucrium chamaedrysAjugoideae · Teucrium Stable locus 9850 No matrix
Salvia splendensNepetoideae · Salvia Stable locus 9750 No matrix
Ocimum basilicumNepetoideae · Ocimum Stable locus 9150 Available
Nepeta catariaNepetoideae · Nepeta Stable locus 8550 Available
Salvia hispanicaNepetoideae · Salvia Stable locus 7050 No matrix
Teucrium marumAjugoideae · Teucrium Stable locus 7050 No matrix
Callicarpa americanaCallicarpoideae · Callicarpa Stable locus 6950 No matrix
Salvia rosmarinusNepetoideae · Salvia Stable locus 6650 Available
Stenogyne calaminthoidesLamioideae · Stenogyne Stable locus 6450 No matrix
Prunella vulgarisNepetoideae · Prunella Stable locus 5550 No matrix
Salvia divinorumNepetoideae · Salvia Stable locus 5550 No matrix
Tectona grandisTectonoideae · Tectona Stable locus 5550 Available
Clinopodium barosmumNepetoideae · Clinopodium Stable locus 5450 No matrix
Hyssopus officinalisNepetoideae · Hyssopus Stable locus 5150 No matrix
Nepeta mussiniiNepetoideae · Nepeta Stable locus 5150 Available
Perilla frutescensNepetoideae · Perilla Stable locus 5050 No matrix
Phlomoides rotataLamioideae · Phlomoides Stable locus 4949 No matrix
Salvia bowleyanaNepetoideae · Salvia Stable locus 4949 No matrix
Salvia miltiorrhizaNepetoideae · Salvia Stable locus 4646 Available
Ajuga decumbensAjugoideae · Ajuga Stable locus 4444 No matrix
Isodon lophanthoidesNepetoideae · Isodon Stable locus 4444 No matrix
Mosla soochowensisNepetoideae · Mosla Stable locus 4343 No matrix
Callicarpa nudifloraCallicarpoideae · Callicarpa Stable locus 4242 No matrix
Mosla chinensisNepetoideae · Mosla Stable locus 4242 No matrix
Clinopodium gracileNepetoideae · Clinopodium Stable locus 4141 No matrix
Origanum vulgareNepetoideae · Origanum Stable locus 4040 No matrix
Glechoma longitubaNepetoideae · Glechoma Stable locus 3939 No matrix
Drepanocaryum sewerzowiiNepetoideae · Drepanocaryum Stable locus 3838 No matrix
Marmoritis complanataNepetoideae · Marmoritis Stable locus 3838 No matrix
Scutellaria baicalensisScutellarioideae · Scutellaria Stable locus 3838 No matrix
Thymus quinquecostatusNepetoideae · Thymus Stable locus 3737 No matrix
Dracocephalum rupestreNepetoideae · Dracocephalum Stable locus 3636 No matrix
Isodon serraNepetoideae · Isodon Stable locus 3636 No matrix
Leonurus japonicusLamioideae · Leonurus Stable locus 3636 No matrix
Scutellaria barbataScutellarioideae · Scutellaria Stable locus 3636 No matrix
Ocimum tenuiflorumNepetoideae · Ocimum Stable locus 3535 No matrix
Agastache rugosaNepetoideae · Agastache Stable locus 3232 No matrix
Cornutia pyramidataPremnoideae · Cornutia Stable locus 3232 No matrix
Perilla citriodoraNepetoideae · Perilla Stable locus 3131 No matrix
Perilla frutescens var. hirtellaNepetoideae · Perilla Stable locus 3131 No matrix
Leonurus sibiricusLamioideae · Leonurus Stable locus 2929 No matrix
Plectranthus barbatusNepetoideae · Plectranthus Stable locus 2929 No matrix
Perovskia atriplicifoliaNepetoideae · Perovskia Stable locus 2727 No matrix
Rotheca myricoidesAjugoideae · Rotheca Stable locus 2727 No matrix
Lycopus americanusNepetoideae · Lycopus Stable locus 2626 No matrix
Salvia sclareaNepetoideae · Salvia Stable locus 2626 No matrix
Schizonepeta tenuifoliaNepetoideae · Schizonepeta Stable locus 2626 No matrix
Origanum majoranaNepetoideae · Origanum Stable locus 2525 No matrix
Hyptis suaveolensNepetoideae · Hyptis Stable locus 2424 No matrix
Holmskioldia sanguineaScutellarioideae · Holmskioldia Stable locus 2323 No matrix
Petraeovitex bambusetoriumPeronematoideae · Petraeovitex Stable locus 2323 No matrix
Collinsonia canadensisNepetoideae · Collinsonia Stable locus 2222 No matrix
Glechoma hederaceaNepetoideae · Glechoma Stable locus 2222 No matrix
Lavandula angustifoliaNepetoideae · Lavandula Stable locus 2222 No matrix
Salvia officinalisNepetoideae · Salvia Stable locus 2222 No matrix
Thymus vulgarisNepetoideae · Thymus Stable locus 2222 No matrix
Mentha x piperitaNepetoideae · Mentha Stable locus 2121 No matrix
Premna microphyllaPremnoideae · Premna Stable locus 2121 No matrix
Prostanthera lasianthosProstantheroideae · Prostanthera Stable locus 2020 No matrix
Vitex agnus-castusViticoideae · Vitex Stable locus 2020 No matrix
Agastache foeniculumNepetoideae · Agastache Stable locus 1919 No matrix
Clerodendrum bungeiAjugoideae · Clerodendrum Stable locus 1919 No matrix
Monarda didymaNepetoideae · Monarda Stable locus 1919 No matrix
Westringia fruticosaProstantheroideae · Westringia Stable locus 1919 No matrix
Ajuga reptansAjugoideae · Ajuga Stable locus 1818 No matrix
Congea tomentosaSymphorematoideae · Congea Stable locus 1717 No matrix
Melissa officinalisNepetoideae · Melissa Stable locus 1717 No matrix
Phlomis fruticosaLamioideae · Phlomis Stable locus 1717 No matrix
Ballota pseudodictamnusLamioideae · Ballota Stable locus 1616 No matrix
Mentha longifoliaNepetoideae · Mentha Stable locus 1616 Available
Mentha spicataNepetoideae · Mentha Stable locus 1616 No matrix
Stachys officinalisLamioideae · Stachys Stable locus 1616 No matrix
Leonurus cardiacaLamioideae · Leonurus Stable locus 1515 No matrix
Marrubium vulgareLamioideae · Marrubium Stable locus 1515 No matrix
Teucrium canadenseAjugoideae · Teucrium Stable locus 1515 No matrix
Gmelina philippensisPremnoideae · Gmelina Stable locus 1414 No matrix
Lamium albumLamioideae · Lamium Stable locus 1313 No matrix
Leonotis leonurusLamioideae · Leonotis Stable locus 99 No matrix

Candidate records

Traceable candidate identifiers

Filter and inspect candidate identifiers for this family.

Clear
Candidate IDSpeciesPathway / familyEvidenceConfidenceIdentityHMM score
DRSE_g9392.t1
Drepanocaryum sewerzowiiPhenylpropanoid · C4H_CYP73Ahmm Medium —203.4
DRSE_g9392.t2
Drepanocaryum sewerzowiiPhenylpropanoid · C4H_CYP73Ahmm Medium —203.4
AG34_scaffold9_10490T
Agastache rugosaPhenylpropanoid · C4H_CYP73Ahmm Medium —203.0
GWHPBJVA028259
Thymus quinquecostatusPhenylpropanoid · C4H_CYP73Ahmm Medium —202.9
XP_042013112.1
Salvia splendensPhenylpropanoid · C4H_CYP73Ahmm Medium —202.8
XP_047952664.1
Salvia hispanicaPhenylpropanoid · C4H_CYP73Ahmm Medium —202.8
Pat_B24G117900.m1
Pogostemon cablinPhenylpropanoid · C4H_CYP73Ahmm Medium —202.2
evm.model.LG01.705
Clinopodium barosmumPhenylpropanoid · C4H_CYP73Ahmm Medium —202.1
Smil01G0016480.1.v1.484
Salvia miltiorrhizaPhenylpropanoid · C4H_CYP73Ahmm Medium —201.5
XP_042017047.1
Salvia splendensPhenylpropanoid · C4H_CYP73Ahmm Medium —201.5
GlLon_028972-T1
Glechoma longitubaPhenylpropanoid · C4H_CYP73Ahmm Medium —201.4
g34334.t1
Nepeta catariaPhenylpropanoid · C4H_CYP73Ahmm Medium —201.4
g31862.t1
Nepeta catariaPhenylpropanoid · C4H_CYP73Ahmm Medium —200.9
g14282.t1
Hyssopus officinalisPhenylpropanoid · C4H_CYP73Ahmm Medium —200.6
Dru_1G0013850.1
Dracocephalum rupestrePhenylpropanoid · C4H_CYP73Ahmm Medium —199.8
Sbow08G0022340.1
Salvia bowleyanaPhenylpropanoid · C4H_CYP73Ahmm Medium —198.7
evm.model.ptg000008l.1222
Isodon serraPhenylpropanoid · C4H_CYP73Ahmm Medium —193.7
Es6B.G248300.t1
Elsholtzia splendensPhenylpropanoid · C4H_CYP73Ahmm Medium —192.9
ORMA_c51866_g1_i1_len_1914
Origanum majoranaPhenylpropanoid · C4H_CYP73Ahmm Medium —178.3
evm.model.Chr16.531
Callicarpa nudifloraPhenylpropanoid · C4H_CYP73Ahmm Medium —178.2
evm.model.chr12.1129
Prunella vulgarisPhenylpropanoid · C4H_CYP73Ahmm Medium —175.5
COPY_c69863_g1_i1_len_1840
Cornutia pyramidataPhenylpropanoid · C4H_CYP73Ahmm Medium —174.5
rna-gnl|WGS:QFCC|chr07_27102968_27104508.mrna1
Perilla frutescensPhenylpropanoid · C4H_CYP73Ahmm Medium —174.2
rna-gnl|WGS:QIYW|chr06_27993481_27995021.mrna1
Perilla citriodoraPhenylpropanoid · C4H_CYP73Ahmm Medium —174.2
rna-gnl|WGS:QIYW|chr06_27993481_27995021.mrna1
Perilla frutescens var. hirtellaPhenylpropanoid · C4H_CYP73Ahmm Medium —174.2
THVU_c69913_g1_i2_len_1736
Thymus vulgarisPhenylpropanoid · C4H_CYP73Ahmm Medium —173.8
CAame13G0001120.v1.94
Callicarpa americanaPhenylpropanoid · C4H_CYP73Ahmm Medium —172.2
Smil03G0005380.1.v1.484
Salvia miltiorrhizaPhenylpropanoid · C4H_CYP73Ahmm Medium —171.9
tectona_grandis_Tg17g05550.t1
Tectona grandisPhenylpropanoid · C4H_CYP73Ahmm Medium —171.1
evm.model.LG07.1748
Clinopodium barosmumPhenylpropanoid · C4H_CYP73Ahmm Medium —168.5
g11893.t1
Ajuga decumbensPhenylpropanoid · C4H_CYP73Ahmm Medium —168.4
GWHPBJVA005847
Thymus quinquecostatusPhenylpropanoid · C4H_CYP73Ahmm Medium —167.7
rna-gnl|WGS:QFCC|chr19_13831005_13833160.mrna1
Perilla frutescensPhenylpropanoid · C4H_CYP73Ahmm Medium —167.3
Ms_c005g00951.1
Mosla soochowensisPhenylpropanoid · C4H_CYP73Ahmm Medium —165.6
PLBA_c47270_g2_i2_len_2141
Plectranthus barbatusPhenylpropanoid · C4H_CYP73Ahmm Medium —165.3
Roff17220221940
Salvia rosmarinusPhenylpropanoid · C4H_CYP73Ahmm Medium —165.0
1896.g11.t1
Ocimum basilicumPhenylpropanoid · C4H_CYP73Ahmm Medium —164.7
ROMY_c73001_g2_i1_len_1040
Rotheca myricoidesPhenylpropanoid · C4H_CYP73Ahmm Medium —164.6
THVU_c77063_g1_i3_len_2020
Thymus vulgarisPhenylpropanoid · C4H_CYP73Ahmm Medium —164.4
MAVU_c30470_g1_i1_len_1424
Marrubium vulgarePhenylpropanoid · C4H_CYP73Ahmm Medium —164.1
Mc2g24290.1
Mosla chinensisPhenylpropanoid · C4H_CYP73Ahmm Medium —163.8
Lj4g05840.1
Leonurus japonicusPhenylpropanoid · C4H_CYP73Ahmm Medium —163.5
origanum_vulgare_266.g68.t1
Origanum vulgarePhenylpropanoid · C4H_CYP73Ahmm Medium —163.0
Clgra_015824-T1
Clinopodium gracilePhenylpropanoid · C4H_CYP73Ahmm Medium —162.7
Mc3g30690.1
Mosla chinensisPhenylpropanoid · C4H_CYP73Ahmm Medium —162.7
Ms_c004g00336.1
Mosla soochowensisPhenylpropanoid · C4H_CYP73Ahmm Medium —162.7
Sbow07G0019230.1
Salvia bowleyanaPhenylpropanoid · C4H_CYP73Ahmm Medium —162.2
Sbow07G0020210.1
Salvia bowleyanaPhenylpropanoid · C4H_CYP73Ahmm Medium —162.2
evm.model.Chr15.485
Callicarpa nudifloraPhenylpropanoid · C4H_CYP73Ahmm Medium —162.1
evm.model.ptg000012l.474
Isodon serraPhenylpropanoid · C4H_CYP73Ahmm Medium —162.1