LamiOmicsDB Lamiaceae Multi-Omics Database
v1 808 species · 3 phylogenies · 6,313 sequences

Pathway-family scientific record

CAD

Cinnamyl-alcohol dehydrogenase family

This module includes PlantSME enzyme-family assignments and traceable candidate protein identifiers from genome-derived or transcriptome-derived protein sets.

Browse candidatesCompare speciesCSV
Stable locus plantsmePhenylpropanoid biosynthesis
Public candidate IDs
3,987
Species with candidates
80
Species with assignments
80
Source assignments
9,684
Gene-tree candidates
0
Motif candidates
0

Evidence profile

Available evidence layers

◆Candidate identifiers3,987 public species-linked identifiers can be inspected.
GTGene-tree workflow0 comparable source candidates; 0 high-confidence source calls.
MMotif-screen proxy0 motif-screen candidates; 0 with all required motif proxies.
100 kbLocal clustering proxy0 clusters across 0 species; maximum cluster size 0.

Comparative signature

Lamiaceae comparison fields

Rate delta
Not calculated
Prevalence delta
Not calculated
Comparable source
PlantSME family assignments
Comparable source count
9,684
Public candidate count
3,987
Evidence mode
plantsme

Species coverage

Assignment and locus coverage by species

Source family counts and public candidate identifiers are shown in separate columns.

SpeciesEvidence stateSource countCandidate IDsExpression
Teucrium chamaedrysAjugoideae · Teucrium Stable locus 46950 No matrix
Pogostemon cablinLamioideae · Pogostemon Stable locus 46150 Available
Ocimum basilicumNepetoideae · Ocimum Stable locus 42050 Available
Teucrium marumAjugoideae · Teucrium Stable locus 26650 No matrix
Salvia splendensNepetoideae · Salvia Stable locus 24550 No matrix
Nepeta catariaNepetoideae · Nepeta Stable locus 24450 Available
Hyssopus officinalisNepetoideae · Hyssopus Stable locus 21350 No matrix
Callicarpa americanaCallicarpoideae · Callicarpa Stable locus 21050 No matrix
Salvia hispanicaNepetoideae · Salvia Stable locus 20150 No matrix
Glechoma longitubaNepetoideae · Glechoma Stable locus 18150 No matrix
Perilla frutescensNepetoideae · Perilla Stable locus 17850 No matrix
Elsholtzia splendensNepetoideae · Elsholtzia Stable locus 17550 No matrix
Salvia divinorumNepetoideae · Salvia Stable locus 16850 No matrix
Isodon lophanthoidesNepetoideae · Isodon Stable locus 16550 No matrix
Nepeta mussiniiNepetoideae · Nepeta Stable locus 16450 Available
Tectona grandisTectonoideae · Tectona Stable locus 14650 Available
Isodon serraNepetoideae · Isodon Stable locus 14450 No matrix
Stenogyne calaminthoidesLamioideae · Stenogyne Stable locus 14150 No matrix
Phlomoides rotataLamioideae · Phlomoides Stable locus 13950 No matrix
Callicarpa nudifloraCallicarpoideae · Callicarpa Stable locus 13550 No matrix
Ocimum tenuiflorumNepetoideae · Ocimum Stable locus 13450 No matrix
Dracocephalum rupestreNepetoideae · Dracocephalum Stable locus 13050 No matrix
Salvia rosmarinusNepetoideae · Salvia Stable locus 12050 Available
Origanum vulgareNepetoideae · Origanum Stable locus 11750 No matrix
Salvia bowleyanaNepetoideae · Salvia Stable locus 11150 No matrix
Cornutia pyramidataPremnoideae · Cornutia Stable locus 11050 No matrix
Mosla chinensisNepetoideae · Mosla Stable locus 11050 No matrix
Schizonepeta tenuifoliaNepetoideae · Schizonepeta Stable locus 11050 No matrix
Prunella vulgarisNepetoideae · Prunella Stable locus 10950 No matrix
Mosla soochowensisNepetoideae · Mosla Stable locus 10850 No matrix
Perilla citriodoraNepetoideae · Perilla Stable locus 10850 No matrix
Perilla frutescens var. hirtellaNepetoideae · Perilla Stable locus 10850 No matrix
Salvia miltiorrhizaNepetoideae · Salvia Stable locus 10850 Available
Clinopodium barosmumNepetoideae · Clinopodium Stable locus 10650 No matrix
Premna microphyllaPremnoideae · Premna Stable locus 10550 No matrix
Plectranthus barbatusNepetoideae · Plectranthus Stable locus 10450 No matrix
Phlomis fruticosaLamioideae · Phlomis Stable locus 10250 No matrix
Glechoma hederaceaNepetoideae · Glechoma Stable locus 10150 No matrix
Marmoritis complanataNepetoideae · Marmoritis Stable locus 10150 No matrix
Thymus quinquecostatusNepetoideae · Thymus Stable locus 10150 No matrix
Thymus vulgarisNepetoideae · Thymus Stable locus 10050 No matrix
Hyptis suaveolensNepetoideae · Hyptis Stable locus 9950 No matrix
Vitex agnus-castusViticoideae · Vitex Stable locus 9750 No matrix
Agastache rugosaNepetoideae · Agastache Stable locus 9150 No matrix
Clinopodium gracileNepetoideae · Clinopodium Stable locus 9150 No matrix
Mentha longifoliaNepetoideae · Mentha Stable locus 9050 Available
Lamium albumLamioideae · Lamium Stable locus 8750 No matrix
Leonurus japonicusLamioideae · Leonurus Stable locus 8650 No matrix
Origanum majoranaNepetoideae · Origanum Stable locus 8550 No matrix
Stachys officinalisLamioideae · Stachys Stable locus 8550 No matrix
Ajuga decumbensAjugoideae · Ajuga Stable locus 8350 No matrix
Scutellaria baicalensisScutellarioideae · Scutellaria Stable locus 8150 No matrix
Drepanocaryum sewerzowiiNepetoideae · Drepanocaryum Stable locus 8050 No matrix
Lavandula angustifoliaNepetoideae · Lavandula Stable locus 7950 No matrix
Salvia officinalisNepetoideae · Salvia Stable locus 7950 No matrix
Mentha x piperitaNepetoideae · Mentha Stable locus 7850 No matrix
Leonotis leonurusLamioideae · Leonotis Stable locus 7650 No matrix
Teucrium canadenseAjugoideae · Teucrium Stable locus 7650 No matrix
Gmelina philippensisPremnoideae · Gmelina Stable locus 7550 No matrix
Westringia fruticosaProstantheroideae · Westringia Stable locus 7550 No matrix
Leonurus cardiacaLamioideae · Leonurus Stable locus 7450 No matrix
Mentha spicataNepetoideae · Mentha Stable locus 7450 No matrix
Petraeovitex bambusetoriumPeronematoideae · Petraeovitex Stable locus 7450 No matrix
Ballota pseudodictamnusLamioideae · Ballota Stable locus 7250 No matrix
Leonurus sibiricusLamioideae · Leonurus Stable locus 7250 No matrix
Perovskia atriplicifoliaNepetoideae · Perovskia Stable locus 7150 No matrix
Rotheca myricoidesAjugoideae · Rotheca Stable locus 7150 No matrix
Collinsonia canadensisNepetoideae · Collinsonia Stable locus 7050 No matrix
Ajuga reptansAjugoideae · Ajuga Stable locus 6950 No matrix
Scutellaria barbataScutellarioideae · Scutellaria Stable locus 6950 No matrix
Monarda didymaNepetoideae · Monarda Stable locus 6850 No matrix
Prostanthera lasianthosProstantheroideae · Prostanthera Stable locus 6750 No matrix
Lycopus americanusNepetoideae · Lycopus Stable locus 6650 No matrix
Melissa officinalisNepetoideae · Melissa Stable locus 6650 No matrix
Holmskioldia sanguineaScutellarioideae · Holmskioldia Stable locus 6450 No matrix
Agastache foeniculumNepetoideae · Agastache Stable locus 6150 No matrix
Congea tomentosaSymphorematoideae · Congea Stable locus 6050 No matrix
Clerodendrum bungeiAjugoideae · Clerodendrum Stable locus 5950 No matrix
Marrubium vulgareLamioideae · Marrubium Stable locus 5950 No matrix
Salvia sclareaNepetoideae · Salvia Stable locus 3737 No matrix

Candidate records

Traceable candidate identifiers

Filter and inspect candidate identifiers for this family.

Clear
Candidate IDSpeciesPathway / familyEvidenceConfidenceIdentityHMM score
evm.model.Chr02.769
Callicarpa nudifloraPhenylpropanoid · CADblast+hmm High 31.1%317.5
tectona_grandis_Tg18g09330.t1
Tectona grandisPhenylpropanoid · CADblast+hmm High 30.2%316.9
PEBA_c26680_g1_i1_len_1810
Petraeovitex bambusetoriumPhenylpropanoid · CADblast+hmm High 31.6%312.9
evm.model.Chr06.687
Callicarpa nudifloraPhenylpropanoid · CADblast+hmm High 31.1%312.2
evm.model.ptg000005l.863
Isodon serraPhenylpropanoid · CADblast+hmm High 30.7%308.0
CAame04G0013680.v1.94
Callicarpa americanaPhenylpropanoid · CADblast+hmm High 31.5%304.1
XP_047978988.1
Salvia hispanicaPhenylpropanoid · CADblast+hmm High 30.0%304.1
XP_047978995.1
Salvia hispanicaPhenylpropanoid · CADblast+hmm High 30.0%304.1
CAame04G0011800.v1.94
Callicarpa americanaPhenylpropanoid · CADblast+hmm High 30.6%303.8
evm.model.Chr06.681
Callicarpa nudifloraPhenylpropanoid · CADblast+hmm High 30.5%303.6
VIAG_c45901_g1_i3_len_2129
Vitex agnus-castusPhenylpropanoid · CADblast+hmm High 30.3%300.9
evm.model.ptg000003l.915
Isodon serraPhenylpropanoid · CADblast+hmm High 30.8%300.7
KAL8537687.1
Phlomoides rotataPhenylpropanoid · CADblast+hmm High 30.3%297.4
XP_042063156.1
Salvia splendensPhenylpropanoid · CADblast+hmm High 30.4%289.6
XP_042063131.1
Salvia splendensPhenylpropanoid · CADblast+hmm High 30.1%288.0
Mc1g32350.1
Mosla chinensisPhenylpropanoid · CADblast+hmm High 30.7%287.5
Es1A.G177900.t1
Elsholtzia splendensPhenylpropanoid · CADblast+hmm High 30.8%285.7
CAame04G0013670.v1.94
Callicarpa americanaPhenylpropanoid · CADblast+hmm High 31.4%282.6
LYAM_c32299_g1_i2_len_2085
Lycopus americanusPhenylpropanoid · CADblast+hmm High 30.4%282.4
CLBU_c45372_g1_i2_len_2006
Clerodendrum bungeiPhenylpropanoid · CADblast+hmm High 30.2%282.2
evm.model.ptg000008l.112
Isodon serraPhenylpropanoid · CADblast+hmm High 30.8%281.8
520.g188.t1
Ocimum basilicumPhenylpropanoid · CADblast+hmm High 30.8%280.5
382380.g38.t1
Ocimum basilicumPhenylpropanoid · CADblast+hmm High 30.0%280.0
g26898.t1.1.5b2d4a2a
Nepeta catariaPhenylpropanoid · CADblast+hmm High 30.7%273.3
PEAT_c43641_g1_i1_len_2161
Perovskia atriplicifoliaPhenylpropanoid · CADblast+hmm High 30.1%270.9
Ms_c006g01678.1
Mosla soochowensisPhenylpropanoid · CADblast+hmm High 30.7%270.2
WEFR_c47627_g2_i3_len_2085
Westringia fruticosaPhenylpropanoid · CADblast+hmm High 33.3%270.1
rna-gnl|WGS:QIYW|chr01_07359832_07369537.mrna1
Perilla citriodoraPhenylpropanoid · CADblast+hmm High 30.9%269.5
rna-gnl|WGS:QIYW|chr01_07359832_07369537.mrna1
Perilla frutescens var. hirtellaPhenylpropanoid · CADblast+hmm High 30.9%269.5
385316.g6.t1.1.5db153ce
Ocimum basilicumPhenylpropanoid · CADblast+hmm High 30.0%269.1
23:ILLG1G155.41m1
Isodon lophanthoidesPhenylpropanoid · CADblast+hmm High 30.1%268.5
Pat_A02G143500.m1
Pogostemon cablinPhenylpropanoid · CADblast+hmm High 30.1%268.3
Mc5g19980.1
Mosla chinensisPhenylpropanoid · CADblast+hmm High 30.2%266.9
Dru_6G0009640.1
Dracocephalum rupestrePhenylpropanoid · CADblast+hmm High 30.8%265.9
MEPI_c60018_g1_i2_len_1509
Mentha x piperitaPhenylpropanoid · CADblast+hmm High 30.2%265.8
LAAL_c36213_g6_i3_len_2045
Lamium albumPhenylpropanoid · CADblast+hmm High 32.5%265.3
GlLon_004817-T1
Glechoma longitubaPhenylpropanoid · CADblast+hmm High 30.5%264.6
Teum.06G023130.1
Teucrium marumPhenylpropanoid · CADblast+hmm High 30.3%264.3
evm.model.ptg000009l.729
Isodon serraPhenylpropanoid · CADblast+hmm High 30.2%264.3
MEPI_c56238_g1_i2_len_1931
Mentha x piperitaPhenylpropanoid · CADblast+hmm High 30.7%264.2
MEOF_c16232_g1_i1_len_1216
Melissa officinalisPhenylpropanoid · CADblast+hmm High 30.5%263.7
GMPH_c21047_g1_i1_len_2018
Gmelina philippensisPhenylpropanoid · CADblast+hmm High 32.7%263.2
DRSE_g11739.t1
Drepanocaryum sewerzowiiPhenylpropanoid · CADblast+hmm High 30.2%263.1
COCA_c59126_g1_i1_len_2152
Collinsonia canadensisPhenylpropanoid · CADblast+hmm High 30.1%262.9
ocimum_sanctum_Ote100072560021
Ocimum tenuiflorumPhenylpropanoid · CADblast+hmm High 30.5%262.9
MESP_c39819_g1_i6_len_1957
Mentha spicataPhenylpropanoid · CADblast+hmm High 30.9%262.5
PRLA_c70786_g1_i1_len_2067
Prostanthera lasianthosPhenylpropanoid · CADblast+hmm High 33.0%262.3
383539.g35.t1
Ocimum basilicumPhenylpropanoid · CADblast+hmm High 30.3%261.9
XP_042033249.1
Salvia splendensPhenylpropanoid · CADblast+hmm High 30.0%261.7
XP_042033315.1
Salvia splendensPhenylpropanoid · CADblast+hmm High 30.0%261.7