LamiOmicsDB Lamiaceae Multi-Omics Database
v1 808 species · 3 phylogenies · 6,313 sequences

Pathway-family scientific record

LAC

LAC enzyme-family module

This module includes PlantSME enzyme-family assignments and traceable candidate protein identifiers from genome-derived or transcriptome-derived protein sets.

Browse candidatesCompare speciesCSV
Stable locus plantsmePhenylpropanoid biosynthesis
Public candidate IDs
4,000
Species with candidates
80
Species with assignments
80
Source assignments
10,870
Gene-tree candidates
0
Motif candidates
0

Evidence profile

Available evidence layers

◆Candidate identifiers4,000 public species-linked identifiers can be inspected.
GTGene-tree workflow0 comparable source candidates; 0 high-confidence source calls.
MMotif-screen proxy0 motif-screen candidates; 0 with all required motif proxies.
100 kbLocal clustering proxy0 clusters across 0 species; maximum cluster size 0.

Comparative signature

Lamiaceae comparison fields

Rate delta
Not calculated
Prevalence delta
Not calculated
Comparable source
PlantSME family assignments
Comparable source count
10,870
Public candidate count
4,000
Evidence mode
plantsme

Species coverage

Assignment and locus coverage by species

Source family counts and public candidate identifiers are shown in separate columns.

SpeciesEvidence stateSource countCandidate IDsExpression
Ocimum basilicumNepetoideae · Ocimum Stable locus 43050 Available
Pogostemon cablinLamioideae · Pogostemon Stable locus 42750 Available
Teucrium chamaedrysAjugoideae · Teucrium Stable locus 41150 No matrix
Nepeta catariaNepetoideae · Nepeta Stable locus 31550 Available
Salvia splendensNepetoideae · Salvia Stable locus 25750 No matrix
Elsholtzia splendensNepetoideae · Elsholtzia Stable locus 24950 No matrix
Callicarpa americanaCallicarpoideae · Callicarpa Stable locus 23950 No matrix
Teucrium marumAjugoideae · Teucrium Stable locus 22550 No matrix
Hyssopus officinalisNepetoideae · Hyssopus Stable locus 21150 No matrix
Clinopodium barosmumNepetoideae · Clinopodium Stable locus 19750 No matrix
Salvia rosmarinusNepetoideae · Salvia Stable locus 19250 Available
Stenogyne calaminthoidesLamioideae · Stenogyne Stable locus 18950 No matrix
Nepeta mussiniiNepetoideae · Nepeta Stable locus 17050 Available
Origanum vulgareNepetoideae · Origanum Stable locus 17050 No matrix
Perilla frutescensNepetoideae · Perilla Stable locus 16350 No matrix
Phlomoides rotataLamioideae · Phlomoides Stable locus 16350 No matrix
Salvia divinorumNepetoideae · Salvia Stable locus 16050 No matrix
Ocimum tenuiflorumNepetoideae · Ocimum Stable locus 15150 No matrix
Glechoma longitubaNepetoideae · Glechoma Stable locus 15050 No matrix
Prunella vulgarisNepetoideae · Prunella Stable locus 14950 No matrix
Salvia bowleyanaNepetoideae · Salvia Stable locus 14850 No matrix
Thymus quinquecostatusNepetoideae · Thymus Stable locus 14550 No matrix
Dracocephalum rupestreNepetoideae · Dracocephalum Stable locus 14350 No matrix
Tectona grandisTectonoideae · Tectona Stable locus 14350 Available
Cornutia pyramidataPremnoideae · Cornutia Stable locus 14250 No matrix
Clinopodium gracileNepetoideae · Clinopodium Stable locus 13950 No matrix
Salvia hispanicaNepetoideae · Salvia Stable locus 13950 No matrix
Ajuga decumbensAjugoideae · Ajuga Stable locus 13450 No matrix
Isodon lophanthoidesNepetoideae · Isodon Stable locus 13450 No matrix
Schizonepeta tenuifoliaNepetoideae · Schizonepeta Stable locus 13350 No matrix
Isodon serraNepetoideae · Isodon Stable locus 13150 No matrix
Salvia miltiorrhizaNepetoideae · Salvia Stable locus 12950 Available
Marmoritis complanataNepetoideae · Marmoritis Stable locus 12650 No matrix
Mosla soochowensisNepetoideae · Mosla Stable locus 12350 No matrix
Hyptis suaveolensNepetoideae · Hyptis Stable locus 12050 No matrix
Callicarpa nudifloraCallicarpoideae · Callicarpa Stable locus 11750 No matrix
Mosla chinensisNepetoideae · Mosla Stable locus 11650 No matrix
Drepanocaryum sewerzowiiNepetoideae · Drepanocaryum Stable locus 11350 No matrix
Thymus vulgarisNepetoideae · Thymus Stable locus 11250 No matrix
Mentha longifoliaNepetoideae · Mentha Stable locus 11150 Available
Lavandula angustifoliaNepetoideae · Lavandula Stable locus 11050 No matrix
Plectranthus barbatusNepetoideae · Plectranthus Stable locus 10950 No matrix
Rotheca myricoidesAjugoideae · Rotheca Stable locus 10650 No matrix
Phlomis fruticosaLamioideae · Phlomis Stable locus 10450 No matrix
Vitex agnus-castusViticoideae · Vitex Stable locus 10350 No matrix
Premna microphyllaPremnoideae · Premna Stable locus 10250 No matrix
Mentha x piperitaNepetoideae · Mentha Stable locus 10150 No matrix
Scutellaria baicalensisScutellarioideae · Scutellaria Stable locus 10150 No matrix
Holmskioldia sanguineaScutellarioideae · Holmskioldia Stable locus 9950 No matrix
Leonurus sibiricusLamioideae · Leonurus Stable locus 9850 No matrix
Scutellaria barbataScutellarioideae · Scutellaria Stable locus 9850 No matrix
Clerodendrum bungeiAjugoideae · Clerodendrum Stable locus 9650 No matrix
Perovskia atriplicifoliaNepetoideae · Perovskia Stable locus 9650 No matrix
Glechoma hederaceaNepetoideae · Glechoma Stable locus 9550 No matrix
Salvia officinalisNepetoideae · Salvia Stable locus 9550 No matrix
Leonurus japonicusLamioideae · Leonurus Stable locus 9450 No matrix
Origanum majoranaNepetoideae · Origanum Stable locus 9450 No matrix
Mentha spicataNepetoideae · Mentha Stable locus 9350 No matrix
Perilla citriodoraNepetoideae · Perilla Stable locus 9350 No matrix
Perilla frutescens var. hirtellaNepetoideae · Perilla Stable locus 9350 No matrix
Melissa officinalisNepetoideae · Melissa Stable locus 9150 No matrix
Teucrium canadenseAjugoideae · Teucrium Stable locus 9150 No matrix
Congea tomentosaSymphorematoideae · Congea Stable locus 8950 No matrix
Agastache foeniculumNepetoideae · Agastache Stable locus 8850 No matrix
Prostanthera lasianthosProstantheroideae · Prostanthera Stable locus 8850 No matrix
Monarda didymaNepetoideae · Monarda Stable locus 8750 No matrix
Petraeovitex bambusetoriumPeronematoideae · Petraeovitex Stable locus 8750 No matrix
Leonurus cardiacaLamioideae · Leonurus Stable locus 8650 No matrix
Gmelina philippensisPremnoideae · Gmelina Stable locus 8550 No matrix
Lamium albumLamioideae · Lamium Stable locus 8550 No matrix
Agastache rugosaNepetoideae · Agastache Stable locus 8450 No matrix
Ajuga reptansAjugoideae · Ajuga Stable locus 8450 No matrix
Collinsonia canadensisNepetoideae · Collinsonia Stable locus 8450 No matrix
Leonotis leonurusLamioideae · Leonotis Stable locus 8450 No matrix
Ballota pseudodictamnusLamioideae · Ballota Stable locus 8350 No matrix
Lycopus americanusNepetoideae · Lycopus Stable locus 8250 No matrix
Marrubium vulgareLamioideae · Marrubium Stable locus 8250 No matrix
Stachys officinalisLamioideae · Stachys Stable locus 7950 No matrix
Westringia fruticosaProstantheroideae · Westringia Stable locus 7850 No matrix
Salvia sclareaNepetoideae · Salvia Stable locus 5750 No matrix

Candidate records

Traceable candidate identifiers

Filter and inspect candidate identifiers for this family.

Clear
Candidate IDSpeciesPathway / familyEvidenceConfidenceIdentityHMM score
Mc9g17340.1
Mosla chinensisPhenylpropanoid · LACblast+hmm High 77.7%834.8
g27904.t1
Nepeta catariaPhenylpropanoid · LACblast+hmm High 77.3%834.5
Ms_c003g01699.1
Mosla soochowensisPhenylpropanoid · LACblast+hmm High 77.3%834.4
PEAT_c35974_g1_i2_len_1885
Perovskia atriplicifoliaPhenylpropanoid · LACblast+hmm High 76.8%834.3
PEBA_c44044_g1_i1_len_1865
Petraeovitex bambusetoriumPhenylpropanoid · LACblast+hmm High 78.9%833.7
tectona_grandis_Tg12g17030.t1
Tectona grandisPhenylpropanoid · LACblast+hmm High 78.4%833.5
Smil07G0016810.1.v1.484
Salvia miltiorrhizaPhenylpropanoid · LACblast+hmm High 76.5%833.4
Sch000025299
Schizonepeta tenuifoliaPhenylpropanoid · LACblast+hmm High 78.3%833.0
Roff21140272600
Salvia rosmarinusPhenylpropanoid · LACblast+hmm High 77.4%832.0
CAame04G0000970.v1.94
Callicarpa americanaPhenylpropanoid · LACblast+hmm High 79.2%829.7
g255.t1
Hyssopus officinalisPhenylpropanoid · LACblast+hmm High 77.9%829.3
WEFR_c41395_g1_i2_len_1954
Westringia fruticosaPhenylpropanoid · LACblast+hmm High 77.7%829.2
DRSE_g6226.t1
Drepanocaryum sewerzowiiPhenylpropanoid · LACblast+hmm High 75.8%828.7
GMPH_c34298_g1_i1_len_1971
Gmelina philippensisPhenylpropanoid · LACblast+hmm High 78.8%828.7
383786.g9.t1
Ocimum basilicumPhenylpropanoid · LACblast+hmm High 77.5%828.5
PRLA_c65257_g1_i3_len_1846
Prostanthera lasianthosPhenylpropanoid · LACblast+hmm High 76.8%828.3
Dru_5G0035170.1
Dracocephalum rupestrePhenylpropanoid · LACblast+hmm High 77.9%828.0
748.g62.t1
Ocimum basilicumPhenylpropanoid · LACblast+hmm High 77.1%827.9
Es3B.G141400.t1
Elsholtzia splendensPhenylpropanoid · LACblast+hmm High 76.8%827.8
evm.model.chr2.308
Prunella vulgarisPhenylpropanoid · LACblast+hmm High 78.3%827.5
Es3A.G142100.t1
Elsholtzia splendensPhenylpropanoid · LACblast+hmm High 76.8%827.1
31:ILLG4G312.36m1
Isodon lophanthoidesPhenylpropanoid · LACblast+hmm High 76.6%826.9
evm.model.Chr10.618
Callicarpa nudifloraPhenylpropanoid · LACblast+hmm High 78.7%826.3
AG34_scaffold8_13890T
Agastache rugosaPhenylpropanoid · LACblast+hmm High 77.0%826.0
Ls5g20680.1
Leonurus sibiricusPhenylpropanoid · LACblast+hmm High 75.3%825.9
rna-gnl|WGS:QFCC|chr04_07311619_07315392.mrna1
Perilla frutescensPhenylpropanoid · LACblast+hmm High 77.7%825.8
rna-gnl|WGS:QIYW|chr03_61146695_61150463.mrna1
Perilla citriodoraPhenylpropanoid · LACblast+hmm High 77.7%825.8
rna-gnl|WGS:QIYW|chr03_61146695_61150463.mrna1
Perilla frutescens var. hirtellaPhenylpropanoid · LACblast+hmm High 77.7%825.8
evm.model.Chr06.42
Callicarpa nudifloraPhenylpropanoid · LACblast+hmm High 78.8%825.7
CAame11G0012610.v1.94
Callicarpa americanaPhenylpropanoid · LACblast+hmm High 78.3%824.9
Teucrium_chamaedrys__Tcha137334
Teucrium chamaedrysPhenylpropanoid · LACblast+hmm High 75.3%824.9
scutellaria_barbata_GWHPAOTP022988
Scutellaria barbataPhenylpropanoid · LACblast+hmm High 77.1%824.3
COPY_c78939_g2_i1_len_2098
Cornutia pyramidataPhenylpropanoid · LACblast+hmm High 78.1%823.5
PLBA_c1842_g1_i1_len_1676
Plectranthus barbatusPhenylpropanoid · LACblast+hmm High 74.7%823.2
evm.model.ptg000001l.1027
Isodon serraPhenylpropanoid · LACblast+hmm High 76.6%822.9
g21364.t1
Nepeta catariaPhenylpropanoid · LACblast+hmm High 77.0%822.8
MACO_g2012.t1
Marmoritis complanataPhenylpropanoid · LACblast+hmm High 77.2%822.7
ocimum_sanctum_Ote100277100031
Ocimum tenuiflorumPhenylpropanoid · LACblast+hmm High 73.0%822.3
XP_047939951.1
Salvia hispanicaPhenylpropanoid · LACblast+hmm High 76.4%822.2
Lj7g15450.1
Leonurus japonicusPhenylpropanoid · LACblast+hmm High 74.6%821.7
evm.model.Chr01.290
Callicarpa nudifloraPhenylpropanoid · LACblast+hmm High 81.1%821.6
GMPH_c29505_g1_i2_len_2219
Gmelina philippensisPhenylpropanoid · LACblast+hmm High 78.6%821.3
XP_042003964.1
Salvia splendensPhenylpropanoid · LACblast+hmm High 75.6%821.2
PRLA_c69465_g1_i1_len_1974
Prostanthera lasianthosPhenylpropanoid · LACblast+hmm High 79.0%820.7
1445.g18.t1
Ocimum basilicumPhenylpropanoid · LACblast+hmm High 78.6%820.6
KAL8556551.1
Phlomoides rotataPhenylpropanoid · LACblast+hmm High 76.9%820.6
XP_042035876.1
Salvia splendensPhenylpropanoid · LACblast+hmm High 75.7%819.7
g17719.t1
Ajuga decumbensPhenylpropanoid · LACblast+hmm High 78.6%819.7
PEBA_c71312_g1_i1_len_2132
Petraeovitex bambusetoriumPhenylpropanoid · LACblast+hmm High 78.1%819.6
tectona_grandis_Tg18g02950.t1
Tectona grandisPhenylpropanoid · LACblast+hmm High 80.7%818.9