LamiOmicsDB Lamiaceae Multi-Omics Database
v1 808 species · 3 phylogenies · 6,313 sequences

Pathway-family scientific record

LAC

LAC enzyme-family module

This module includes PlantSME enzyme-family assignments and traceable candidate protein identifiers from genome-derived or transcriptome-derived protein sets.

Browse candidatesCompare speciesCSV
Stable locus plantsmePhenylpropanoid biosynthesis
Public candidate IDs
4,000
Species with candidates
80
Species with assignments
80
Source assignments
10,870
Gene-tree candidates
0
Motif candidates
0

Evidence profile

Available evidence layers

◆Candidate identifiers4,000 public species-linked identifiers can be inspected.
GTGene-tree workflow0 comparable source candidates; 0 high-confidence source calls.
MMotif-screen proxy0 motif-screen candidates; 0 with all required motif proxies.
100 kbLocal clustering proxy0 clusters across 0 species; maximum cluster size 0.

Comparative signature

Lamiaceae comparison fields

Rate delta
Not calculated
Prevalence delta
Not calculated
Comparable source
PlantSME family assignments
Comparable source count
10,870
Public candidate count
4,000
Evidence mode
plantsme

Species coverage

Assignment and locus coverage by species

Source family counts and public candidate identifiers are shown in separate columns.

SpeciesEvidence stateSource countCandidate IDsExpression
Ocimum basilicumNepetoideae · Ocimum Stable locus 43050 Available
Pogostemon cablinLamioideae · Pogostemon Stable locus 42750 Available
Teucrium chamaedrysAjugoideae · Teucrium Stable locus 41150 No matrix
Nepeta catariaNepetoideae · Nepeta Stable locus 31550 Available
Salvia splendensNepetoideae · Salvia Stable locus 25750 No matrix
Elsholtzia splendensNepetoideae · Elsholtzia Stable locus 24950 No matrix
Callicarpa americanaCallicarpoideae · Callicarpa Stable locus 23950 No matrix
Teucrium marumAjugoideae · Teucrium Stable locus 22550 No matrix
Hyssopus officinalisNepetoideae · Hyssopus Stable locus 21150 No matrix
Clinopodium barosmumNepetoideae · Clinopodium Stable locus 19750 No matrix
Salvia rosmarinusNepetoideae · Salvia Stable locus 19250 Available
Stenogyne calaminthoidesLamioideae · Stenogyne Stable locus 18950 No matrix
Nepeta mussiniiNepetoideae · Nepeta Stable locus 17050 Available
Origanum vulgareNepetoideae · Origanum Stable locus 17050 No matrix
Perilla frutescensNepetoideae · Perilla Stable locus 16350 No matrix
Phlomoides rotataLamioideae · Phlomoides Stable locus 16350 No matrix
Salvia divinorumNepetoideae · Salvia Stable locus 16050 No matrix
Ocimum tenuiflorumNepetoideae · Ocimum Stable locus 15150 No matrix
Glechoma longitubaNepetoideae · Glechoma Stable locus 15050 No matrix
Prunella vulgarisNepetoideae · Prunella Stable locus 14950 No matrix
Salvia bowleyanaNepetoideae · Salvia Stable locus 14850 No matrix
Thymus quinquecostatusNepetoideae · Thymus Stable locus 14550 No matrix
Dracocephalum rupestreNepetoideae · Dracocephalum Stable locus 14350 No matrix
Tectona grandisTectonoideae · Tectona Stable locus 14350 Available
Cornutia pyramidataPremnoideae · Cornutia Stable locus 14250 No matrix
Clinopodium gracileNepetoideae · Clinopodium Stable locus 13950 No matrix
Salvia hispanicaNepetoideae · Salvia Stable locus 13950 No matrix
Ajuga decumbensAjugoideae · Ajuga Stable locus 13450 No matrix
Isodon lophanthoidesNepetoideae · Isodon Stable locus 13450 No matrix
Schizonepeta tenuifoliaNepetoideae · Schizonepeta Stable locus 13350 No matrix
Isodon serraNepetoideae · Isodon Stable locus 13150 No matrix
Salvia miltiorrhizaNepetoideae · Salvia Stable locus 12950 Available
Marmoritis complanataNepetoideae · Marmoritis Stable locus 12650 No matrix
Mosla soochowensisNepetoideae · Mosla Stable locus 12350 No matrix
Hyptis suaveolensNepetoideae · Hyptis Stable locus 12050 No matrix
Callicarpa nudifloraCallicarpoideae · Callicarpa Stable locus 11750 No matrix
Mosla chinensisNepetoideae · Mosla Stable locus 11650 No matrix
Drepanocaryum sewerzowiiNepetoideae · Drepanocaryum Stable locus 11350 No matrix
Thymus vulgarisNepetoideae · Thymus Stable locus 11250 No matrix
Mentha longifoliaNepetoideae · Mentha Stable locus 11150 Available
Lavandula angustifoliaNepetoideae · Lavandula Stable locus 11050 No matrix
Plectranthus barbatusNepetoideae · Plectranthus Stable locus 10950 No matrix
Rotheca myricoidesAjugoideae · Rotheca Stable locus 10650 No matrix
Phlomis fruticosaLamioideae · Phlomis Stable locus 10450 No matrix
Vitex agnus-castusViticoideae · Vitex Stable locus 10350 No matrix
Premna microphyllaPremnoideae · Premna Stable locus 10250 No matrix
Mentha x piperitaNepetoideae · Mentha Stable locus 10150 No matrix
Scutellaria baicalensisScutellarioideae · Scutellaria Stable locus 10150 No matrix
Holmskioldia sanguineaScutellarioideae · Holmskioldia Stable locus 9950 No matrix
Leonurus sibiricusLamioideae · Leonurus Stable locus 9850 No matrix
Scutellaria barbataScutellarioideae · Scutellaria Stable locus 9850 No matrix
Clerodendrum bungeiAjugoideae · Clerodendrum Stable locus 9650 No matrix
Perovskia atriplicifoliaNepetoideae · Perovskia Stable locus 9650 No matrix
Glechoma hederaceaNepetoideae · Glechoma Stable locus 9550 No matrix
Salvia officinalisNepetoideae · Salvia Stable locus 9550 No matrix
Leonurus japonicusLamioideae · Leonurus Stable locus 9450 No matrix
Origanum majoranaNepetoideae · Origanum Stable locus 9450 No matrix
Mentha spicataNepetoideae · Mentha Stable locus 9350 No matrix
Perilla citriodoraNepetoideae · Perilla Stable locus 9350 No matrix
Perilla frutescens var. hirtellaNepetoideae · Perilla Stable locus 9350 No matrix
Melissa officinalisNepetoideae · Melissa Stable locus 9150 No matrix
Teucrium canadenseAjugoideae · Teucrium Stable locus 9150 No matrix
Congea tomentosaSymphorematoideae · Congea Stable locus 8950 No matrix
Agastache foeniculumNepetoideae · Agastache Stable locus 8850 No matrix
Prostanthera lasianthosProstantheroideae · Prostanthera Stable locus 8850 No matrix
Monarda didymaNepetoideae · Monarda Stable locus 8750 No matrix
Petraeovitex bambusetoriumPeronematoideae · Petraeovitex Stable locus 8750 No matrix
Leonurus cardiacaLamioideae · Leonurus Stable locus 8650 No matrix
Gmelina philippensisPremnoideae · Gmelina Stable locus 8550 No matrix
Lamium albumLamioideae · Lamium Stable locus 8550 No matrix
Agastache rugosaNepetoideae · Agastache Stable locus 8450 No matrix
Ajuga reptansAjugoideae · Ajuga Stable locus 8450 No matrix
Collinsonia canadensisNepetoideae · Collinsonia Stable locus 8450 No matrix
Leonotis leonurusLamioideae · Leonotis Stable locus 8450 No matrix
Ballota pseudodictamnusLamioideae · Ballota Stable locus 8350 No matrix
Lycopus americanusNepetoideae · Lycopus Stable locus 8250 No matrix
Marrubium vulgareLamioideae · Marrubium Stable locus 8250 No matrix
Stachys officinalisLamioideae · Stachys Stable locus 7950 No matrix
Westringia fruticosaProstantheroideae · Westringia Stable locus 7850 No matrix
Salvia sclareaNepetoideae · Salvia Stable locus 5750 No matrix

Candidate records

Traceable candidate identifiers

Filter and inspect candidate identifiers for this family.

Clear
Candidate IDSpeciesPathway / familyEvidenceConfidenceIdentityHMM score
HYSU_c75413_g1_i1_len_1981
Hyptis suaveolensPhenylpropanoid · LACblast+hmm High 72.3%545.2
LELE_c28476_g4_i2_len_1996
Leonotis leonurusPhenylpropanoid · LACblast+hmm High 71.5%545.0
evm.model.Chr11.1058
Callicarpa nudifloraPhenylpropanoid · LACblast+hmm High 71.7%545.0
CAame08G0022800.v1.94
Callicarpa americanaPhenylpropanoid · LACblast+hmm High 71.9%544.5
Roff10590073760
Salvia rosmarinusPhenylpropanoid · LACblast+hmm High 71.7%544.4
THVU_c75481_g1_i1_len_1931
Thymus vulgarisPhenylpropanoid · LACblast+hmm High 70.7%544.2
rna-gnl|WGS:QIYW|chr08_07302371_07308355.mrna1
Perilla citriodoraPhenylpropanoid · LACblast+hmm High 70.4%544.2
rna-gnl|WGS:QIYW|chr08_07302371_07308355.mrna1
Perilla frutescens var. hirtellaPhenylpropanoid · LACblast+hmm High 70.4%544.2
MEOF_c22565_g1_i1_len_1987
Melissa officinalisPhenylpropanoid · LACblast+hmm High 70.6%544.0
ORMA_c39602_g1_i2_len_2098
Origanum majoranaPhenylpropanoid · LACblast+hmm High 71.7%543.9
TECA_c17767_g1_i1_len_1905
Teucrium canadensePhenylpropanoid · LACblast+hmm High 78.2%543.7
CAame08G0040520.v1.94
Callicarpa americanaPhenylpropanoid · LACblast+hmm High 71.6%543.5
381167.g16.t1
Ocimum basilicumPhenylpropanoid · LACblast+hmm High 59.6%543.3
MAVU_c27274_g1_i1_len_1949
Marrubium vulgarePhenylpropanoid · LACblast+hmm High 70.0%543.3
rna-gnl|WGS:QFCC|chr11_50976831_50982986.mrna1
Perilla frutescensPhenylpropanoid · LACblast+hmm High 69.3%543.2
XP_047938395.1
Salvia hispanicaPhenylpropanoid · LACblast+hmm High 69.2%542.9
origanum_vulgare_120579.g1.t1
Origanum vulgarePhenylpropanoid · LACblast+hmm High 71.9%542.9
Es2A.G170700.t1
Elsholtzia splendensPhenylpropanoid · LACblast+hmm High 69.2%541.8
Mc4g09810.1
Mosla chinensisPhenylpropanoid · LACblast+hmm High 69.9%541.8
rna-gnl|WGS:QFCC|chr12_07910197_07916182.mrna1
Perilla frutescensPhenylpropanoid · LACblast+hmm High 70.4%541.5
WEFR_c38009_g1_i1_len_1980
Westringia fruticosaPhenylpropanoid · LACblast+hmm High 69.6%541.4
g34294.t1
Nepeta catariaPhenylpropanoid · LACblast+hmm High 72.5%541.3
Es2B.G171500.t1
Elsholtzia splendensPhenylpropanoid · LACblast+hmm High 69.0%541.1
383808.g7.t1
Ocimum basilicumPhenylpropanoid · LACblast+hmm High 51.7%540.9
ROMY_c78646_g2_i2_len_1204
Rotheca myricoidesPhenylpropanoid · LACblast+hmm High 74.9%540.8
DRSE_g11602.t1
Drepanocaryum sewerzowiiPhenylpropanoid · LACblast+hmm High 72.5%540.7
LYAM_c16862_g1_i1_len_1877
Lycopus americanusPhenylpropanoid · LACblast+hmm High 72.0%540.6
724.g31.t1
Ocimum basilicumPhenylpropanoid · LACblast+hmm High 74.6%540.3
AG34_scaffold2_26450T
Agastache rugosaPhenylpropanoid · LACblast+hmm High 70.9%540.2
GWHPBJVA008994
Thymus quinquecostatusPhenylpropanoid · LACblast+hmm High 70.5%540.2
AJRE_c27111_g1_i1_len_2053
Ajuga reptansPhenylpropanoid · LACblast+hmm High 72.6%539.5
AGFO_c46157_g1_i1_len_1912
Agastache foeniculumPhenylpropanoid · LACblast+hmm High 70.7%539.4
THVU_c75481_g2_i1_len_2079
Thymus vulgarisPhenylpropanoid · LACblast+hmm High 76.7%539.4
KAL8475062.1
Phlomoides rotataPhenylpropanoid · LACblast+hmm High 77.5%539.0
MACO_g15938.t1
Marmoritis complanataPhenylpropanoid · LACblast+hmm High 64.6%538.9
Mlonscaffold_6_length_375374740137980.1.v1.326
Mentha longifoliaPhenylpropanoid · LACblast+hmm High 67.2%538.8
Sbow02G0055610.1
Salvia bowleyanaPhenylpropanoid · LACblast+hmm High 69.9%538.8
MESP_c45112_g2_i4_len_2015
Mentha spicataPhenylpropanoid · LACblast+hmm High 70.3%538.4
XP_042043854.1
Salvia splendensPhenylpropanoid · LACblast+hmm High 69.9%538.2
LECA_c32425_g1_i2_len_1713
Leonurus cardiacaPhenylpropanoid · LACblast+hmm High 70.0%538.1
MACO_g6804.t1
Marmoritis complanataPhenylpropanoid · LACblast+hmm High 72.5%538.1
Sch000012509
Schizonepeta tenuifoliaPhenylpropanoid · LACblast+hmm High 70.2%538.0
Ls2g08180.1
Leonurus sibiricusPhenylpropanoid · LACblast+hmm High 71.1%537.5
COCA_c75237_g1_i1_len_2085
Collinsonia canadensisPhenylpropanoid · LACblast+hmm High 70.0%537.4
Smil00G0007010.1.v1.484
Salvia miltiorrhizaPhenylpropanoid · LACblast+hmm High 70.0%537.3
evm.model.LG07.2159
Clinopodium barosmumPhenylpropanoid · LACblast+hmm High 69.8%537.3
PRLA_c70482_g1_i1_len_2013
Prostanthera lasianthosPhenylpropanoid · LACblast+hmm High 71.6%537.2
Lj4g10180.1
Leonurus japonicusPhenylpropanoid · LACblast+hmm High 76.8%536.9
Dru_2G0024910.1
Dracocephalum rupestrePhenylpropanoid · LACblast+hmm High 70.3%536.8
Ms_c009g00909.1
Mosla soochowensisPhenylpropanoid · LACblast+hmm High 71.1%536.8