LamiOmicsDB Lamiaceae Multi-Omics Database
v1 808 species · 3 phylogenies · 6,313 sequences

Pathway-family scientific record

SMO1_SMO2

SMO1 / SMO2 enzyme-family module

This module includes PlantSME enzyme-family assignments and traceable candidate protein identifiers from genome-derived or transcriptome-derived protein sets.

Browse candidatesCompare speciesCSV
Stable locus plantsmeSteroid and sterol biosynthesis
Public candidate IDs
1,949
Species with candidates
80
Species with assignments
80
Source assignments
2,076
Gene-tree candidates
0
Motif candidates
0

Evidence profile

Available evidence layers

◆Candidate identifiers1,949 public species-linked identifiers can be inspected.
GTGene-tree workflow0 comparable source candidates; 0 high-confidence source calls.
MMotif-screen proxy0 motif-screen candidates; 0 with all required motif proxies.
100 kbLocal clustering proxy0 clusters across 0 species; maximum cluster size 0.

Comparative signature

Lamiaceae comparison fields

Rate delta
Not calculated
Prevalence delta
Not calculated
Comparable source
PlantSME family assignments
Comparable source count
2,076
Public candidate count
1,949
Evidence mode
plantsme

Species coverage

Assignment and locus coverage by species

Source family counts and public candidate identifiers are shown in separate columns.

SpeciesEvidence stateSource countCandidate IDsExpression
Pogostemon cablinLamioideae · Pogostemon Stable locus 10950 Available
Nepeta catariaNepetoideae · Nepeta Stable locus 9650 Available
Ocimum basilicumNepetoideae · Ocimum Stable locus 5950 Available
Salvia splendensNepetoideae · Salvia Stable locus 5550 No matrix
Callicarpa americanaCallicarpoideae · Callicarpa Stable locus 5450 No matrix
Teucrium chamaedrysAjugoideae · Teucrium Stable locus 5450 No matrix
Elsholtzia splendensNepetoideae · Elsholtzia Stable locus 4848 No matrix
Nepeta mussiniiNepetoideae · Nepeta Stable locus 4545 Available
Salvia rosmarinusNepetoideae · Salvia Stable locus 4040 Available
Teucrium marumAjugoideae · Teucrium Stable locus 3838 No matrix
Salvia hispanicaNepetoideae · Salvia Stable locus 3434 No matrix
Perilla frutescensNepetoideae · Perilla Stable locus 3333 No matrix
Stenogyne calaminthoidesLamioideae · Stenogyne Stable locus 3333 No matrix
Cornutia pyramidataPremnoideae · Cornutia Stable locus 3030 No matrix
Dracocephalum rupestreNepetoideae · Dracocephalum Stable locus 3030 No matrix
Ocimum tenuiflorumNepetoideae · Ocimum Stable locus 2929 No matrix
Hyssopus officinalisNepetoideae · Hyssopus Stable locus 2828 No matrix
Prunella vulgarisNepetoideae · Prunella Stable locus 2828 No matrix
Clinopodium barosmumNepetoideae · Clinopodium Stable locus 2727 No matrix
Salvia divinorumNepetoideae · Salvia Stable locus 2727 No matrix
Hyptis suaveolensNepetoideae · Hyptis Stable locus 2626 No matrix
Plectranthus barbatusNepetoideae · Plectranthus Stable locus 2626 No matrix
Ajuga decumbensAjugoideae · Ajuga Stable locus 2525 No matrix
Petraeovitex bambusetoriumPeronematoideae · Petraeovitex Stable locus 2525 No matrix
Premna microphyllaPremnoideae · Premna Stable locus 2525 No matrix
Tectona grandisTectonoideae · Tectona Stable locus 2525 Available
Ballota pseudodictamnusLamioideae · Ballota Stable locus 2424 No matrix
Mosla chinensisNepetoideae · Mosla Stable locus 2424 No matrix
Westringia fruticosaProstantheroideae · Westringia Stable locus 2424 No matrix
Agastache rugosaNepetoideae · Agastache Stable locus 2323 No matrix
Glechoma hederaceaNepetoideae · Glechoma Stable locus 2323 No matrix
Phlomoides rotataLamioideae · Phlomoides Stable locus 2323 No matrix
Prostanthera lasianthosProstantheroideae · Prostanthera Stable locus 2323 No matrix
Rotheca myricoidesAjugoideae · Rotheca Stable locus 2323 No matrix
Marmoritis complanataNepetoideae · Marmoritis Stable locus 2222 No matrix
Thymus vulgarisNepetoideae · Thymus Stable locus 2222 No matrix
Vitex agnus-castusViticoideae · Vitex Stable locus 2222 No matrix
Callicarpa nudifloraCallicarpoideae · Callicarpa Stable locus 2121 No matrix
Drepanocaryum sewerzowiiNepetoideae · Drepanocaryum Stable locus 2121 No matrix
Isodon lophanthoidesNepetoideae · Isodon Stable locus 2121 No matrix
Melissa officinalisNepetoideae · Melissa Stable locus 2121 No matrix
Phlomis fruticosaLamioideae · Phlomis Stable locus 2121 No matrix
Clerodendrum bungeiAjugoideae · Clerodendrum Stable locus 2020 No matrix
Collinsonia canadensisNepetoideae · Collinsonia Stable locus 2020 No matrix
Congea tomentosaSymphorematoideae · Congea Stable locus 2020 No matrix
Isodon serraNepetoideae · Isodon Stable locus 2020 No matrix
Lavandula angustifoliaNepetoideae · Lavandula Stable locus 2020 No matrix
Marrubium vulgareLamioideae · Marrubium Stable locus 2020 No matrix
Monarda didymaNepetoideae · Monarda Stable locus 2020 No matrix
Mosla soochowensisNepetoideae · Mosla Stable locus 2020 No matrix
Salvia officinalisNepetoideae · Salvia Stable locus 2020 No matrix
Teucrium canadenseAjugoideae · Teucrium Stable locus 2020 No matrix
Holmskioldia sanguineaScutellarioideae · Holmskioldia Stable locus 1919 No matrix
Leonotis leonurusLamioideae · Leonotis Stable locus 1919 No matrix
Leonurus japonicusLamioideae · Leonurus Stable locus 1919 No matrix
Origanum majoranaNepetoideae · Origanum Stable locus 1919 No matrix
Scutellaria barbataScutellarioideae · Scutellaria Stable locus 1919 No matrix
Agastache foeniculumNepetoideae · Agastache Stable locus 1818 No matrix
Gmelina philippensisPremnoideae · Gmelina Stable locus 1818 No matrix
Leonurus sibiricusLamioideae · Leonurus Stable locus 1818 No matrix
Lycopus americanusNepetoideae · Lycopus Stable locus 1818 No matrix
Mentha x piperitaNepetoideae · Mentha Stable locus 1818 No matrix
Origanum vulgareNepetoideae · Origanum Stable locus 1818 No matrix
Salvia bowleyanaNepetoideae · Salvia Stable locus 1818 No matrix
Schizonepeta tenuifoliaNepetoideae · Schizonepeta Stable locus 1818 No matrix
Scutellaria baicalensisScutellarioideae · Scutellaria Stable locus 1818 No matrix
Ajuga reptansAjugoideae · Ajuga Stable locus 1717 No matrix
Glechoma longitubaNepetoideae · Glechoma Stable locus 1717 No matrix
Lamium albumLamioideae · Lamium Stable locus 1717 No matrix
Perovskia atriplicifoliaNepetoideae · Perovskia Stable locus 1717 No matrix
Salvia miltiorrhizaNepetoideae · Salvia Stable locus 1717 Available
Thymus quinquecostatusNepetoideae · Thymus Stable locus 1717 No matrix
Stachys officinalisLamioideae · Stachys Stable locus 1616 No matrix
Clinopodium gracileNepetoideae · Clinopodium Stable locus 1515 No matrix
Mentha spicataNepetoideae · Mentha Stable locus 1414 No matrix
Perilla citriodoraNepetoideae · Perilla Stable locus 1414 No matrix
Perilla frutescens var. hirtellaNepetoideae · Perilla Stable locus 1414 No matrix
Leonurus cardiacaLamioideae · Leonurus Stable locus 1313 No matrix
Salvia sclareaNepetoideae · Salvia Stable locus 1313 No matrix
Mentha longifoliaNepetoideae · Mentha Stable locus 1111 Available

Candidate records

Traceable candidate identifiers

Filter and inspect candidate identifiers for this family.

Clear
Candidate IDSpeciesPathway / familyEvidenceConfidenceIdentityHMM score
Ls5g15910.1
Leonurus sibiricusSteroid / sterol · SMO1_SMO2blast+hmm High 80.4%490.7
LECA_c35462_g1_i1_len_1322
Leonurus cardiacaSteroid / sterol · SMO1_SMO2blast+hmm High 80.1%487.1
Lj5g10630.1
Leonurus japonicusSteroid / sterol · SMO1_SMO2blast+hmm High 92.2%486.9
WEFR_c43276_g2_i1_len_1295
Westringia fruticosaSteroid / sterol · SMO1_SMO2blast+hmm High 91.0%486.8
CAame06G0022940.v1.94
Callicarpa americanaSteroid / sterol · SMO1_SMO2blast+hmm High 91.4%486.6
origanum_vulgare_948.g11.t1
Origanum vulgareSteroid / sterol · SMO1_SMO2blast+hmm High 90.7%486.6
evm.model.LG15.611
Clinopodium barosmumSteroid / sterol · SMO1_SMO2blast+hmm High 90.3%486.5
LAAL_c23330_g1_i1_len_1406
Lamium albumSteroid / sterol · SMO1_SMO2blast+hmm High 78.0%486.2
GMPH_c25299_g1_i1_len_1253
Gmelina philippensisSteroid / sterol · SMO1_SMO2blast+hmm High 91.8%486.1
TECA_c11903_g1_i1_len_1381
Teucrium canadenseSteroid / sterol · SMO1_SMO2blast+hmm High 78.9%486.1
tectona_grandis_Tg14g07710.t1
Tectona grandisSteroid / sterol · SMO1_SMO2blast+hmm High 91.8%486.1
evm.model.LG02.2631
Clinopodium barosmumSteroid / sterol · SMO1_SMO2blast+hmm High 91.0%485.7
Stenogyne_calaminthoides__EVM_prediction_HiC_scaffold_15.1043.mRNA1
Stenogyne calaminthoidesSteroid / sterol · SMO1_SMO2blast+hmm High 91.4%485.6
Clgra_016521-T1
Clinopodium gracileSteroid / sterol · SMO1_SMO2blast+hmm High 91.4%485.5
ROMY_c77181_g3_i2_len_1228
Rotheca myricoidesSteroid / sterol · SMO1_SMO2blast+hmm High 93.0%485.5
BAPS_c41662_g2_i2_len_1468
Ballota pseudodictamnusSteroid / sterol · SMO1_SMO2blast+hmm High 92.2%485.4
g1494.t1
Salvia sclareaSteroid / sterol · SMO1_SMO2blast+hmm High 90.6%485.3
LYAM_c25059_g1_i1_len_1500
Lycopus americanusSteroid / sterol · SMO1_SMO2blast+hmm High 81.6%485.1
Stenogyne_calaminthoides__EVM_prediction_HiC_scaffold_39.1400.mRNA1
Stenogyne calaminthoidesSteroid / sterol · SMO1_SMO2blast+hmm High 91.4%485.1
evm.model.Chr02.1196
Callicarpa nudifloraSteroid / sterol · SMO1_SMO2blast+hmm High 91.0%485.0
Es3B.G344700.t1
Elsholtzia splendensSteroid / sterol · SMO1_SMO2blast+hmm High 83.3%484.6
THVU_c72140_g1_i3_len_1248
Thymus vulgarisSteroid / sterol · SMO1_SMO2blast+hmm High 90.3%484.5
XP_041991023.1
Salvia splendensSteroid / sterol · SMO1_SMO2blast+hmm High 89.9%484.5
XP_047971490.1
Salvia hispanicaSteroid / sterol · SMO1_SMO2blast+hmm High 89.9%484.5
g7372.t1
Hyssopus officinalisSteroid / sterol · SMO1_SMO2blast+hmm High 89.9%484.5
GLHE_c56760_g1_i1_len_1309
Glechoma hederaceaSteroid / sterol · SMO1_SMO2blast+hmm High 90.3%484.4
KAL1558044.1
Salvia divinorumSteroid / sterol · SMO1_SMO2blast+hmm High 90.3%484.4
Mlonscaffold_3_length_454607550093650.1.v1.326
Mentha longifoliaSteroid / sterol · SMO1_SMO2blast+hmm High 89.9%484.4
STOF_c22436_g1_i1_len_1255
Stachys officinalisSteroid / sterol · SMO1_SMO2blast+hmm High 91.8%484.4
MEPI_c56799_g1_i2_len_1225
Mentha x piperitaSteroid / sterol · SMO1_SMO2blast+hmm High 89.9%484.3
evm.model.Chr11.1132
Callicarpa nudifloraSteroid / sterol · SMO1_SMO2blast+hmm High 92.9%484.3
g6111.t1
Nepeta mussiniiSteroid / sterol · SMO1_SMO2blast+hmm High 91.6%484.3
g925.t1.1.5b2d4a2b
Nepeta catariaSteroid / sterol · SMO1_SMO2blast+hmm High 91.6%484.3
Ms_c009g00542.1
Mosla soochowensisSteroid / sterol · SMO1_SMO2blast+hmm High 90.3%484.2
VIAG_c35854_g1_i1_len_1249
Vitex agnus-castusSteroid / sterol · SMO1_SMO2blast+hmm High 91.4%484.2
MAVU_c20239_g1_i1_len_1417
Marrubium vulgareSteroid / sterol · SMO1_SMO2blast+hmm High 92.2%484.0
Mc4g05860.1
Mosla chinensisSteroid / sterol · SMO1_SMO2blast+hmm High 90.6%484.0
Smil04G0024720.1.v1.484
Salvia miltiorrhizaSteroid / sterol · SMO1_SMO2blast+hmm High 89.9%484.0
GWHPBJVA008900
Thymus quinquecostatusSteroid / sterol · SMO1_SMO2blast+hmm High 91.0%483.9
Stenogyne_calaminthoides__EVM_prediction_HiC_scaffold_25.710.mRNA1
Stenogyne calaminthoidesSteroid / sterol · SMO1_SMO2blast+hmm High 80.8%483.9
tectona_grandis_Tg18g06270.t1
Tectona grandisSteroid / sterol · SMO1_SMO2blast+hmm High 92.2%483.9
tectona_grandis_TgUn259g00050.t1
Tectona grandisSteroid / sterol · SMO1_SMO2blast+hmm High 92.2%483.9
AG34_scaffold2_32850T
Agastache rugosaSteroid / sterol · SMO1_SMO2blast+hmm High 90.3%483.8
AGFO_c10632_g1_i1_len_1324
Agastache foeniculumSteroid / sterol · SMO1_SMO2blast+hmm High 90.3%483.8
PHFR_c64814_g1_i1_len_1299
Phlomis fruticosaSteroid / sterol · SMO1_SMO2blast+hmm High 92.2%483.8
GWHPBJVA005469
Thymus quinquecostatusSteroid / sterol · SMO1_SMO2blast+hmm High 90.3%483.7
Es2A.G137600.t1
Elsholtzia splendensSteroid / sterol · SMO1_SMO2blast+hmm High 89.9%483.3
Es2B.G138600.t1
Elsholtzia splendensSteroid / sterol · SMO1_SMO2blast+hmm High 89.9%483.3
Teum.10G010670.3
Teucrium marumSteroid / sterol · SMO1_SMO2blast+hmm High 78.6%483.1
VIAG_c37497_g1_i1_len_1335
Vitex agnus-castusSteroid / sterol · SMO1_SMO2blast+hmm High 80.9%483.1