LamiOmicsDB Lamiaceae Multi-Omics Database
v1 808 species · 3 phylogenies · 6,313 sequences

Pathway-family scientific record

SMO1_SMO2

SMO1 / SMO2 enzyme-family module

This module includes PlantSME enzyme-family assignments and traceable candidate protein identifiers from genome-derived or transcriptome-derived protein sets.

Browse candidatesCompare speciesCSV
Stable locus plantsmeSteroid and sterol biosynthesis
Public candidate IDs
1,949
Species with candidates
80
Species with assignments
80
Source assignments
2,076
Gene-tree candidates
0
Motif candidates
0

Evidence profile

Available evidence layers

◆Candidate identifiers1,949 public species-linked identifiers can be inspected.
GTGene-tree workflow0 comparable source candidates; 0 high-confidence source calls.
MMotif-screen proxy0 motif-screen candidates; 0 with all required motif proxies.
100 kbLocal clustering proxy0 clusters across 0 species; maximum cluster size 0.

Comparative signature

Lamiaceae comparison fields

Rate delta
Not calculated
Prevalence delta
Not calculated
Comparable source
PlantSME family assignments
Comparable source count
2,076
Public candidate count
1,949
Evidence mode
plantsme

Species coverage

Assignment and locus coverage by species

Source family counts and public candidate identifiers are shown in separate columns.

SpeciesEvidence stateSource countCandidate IDsExpression
Pogostemon cablinLamioideae · Pogostemon Stable locus 10950 Available
Nepeta catariaNepetoideae · Nepeta Stable locus 9650 Available
Ocimum basilicumNepetoideae · Ocimum Stable locus 5950 Available
Salvia splendensNepetoideae · Salvia Stable locus 5550 No matrix
Callicarpa americanaCallicarpoideae · Callicarpa Stable locus 5450 No matrix
Teucrium chamaedrysAjugoideae · Teucrium Stable locus 5450 No matrix
Elsholtzia splendensNepetoideae · Elsholtzia Stable locus 4848 No matrix
Nepeta mussiniiNepetoideae · Nepeta Stable locus 4545 Available
Salvia rosmarinusNepetoideae · Salvia Stable locus 4040 Available
Teucrium marumAjugoideae · Teucrium Stable locus 3838 No matrix
Salvia hispanicaNepetoideae · Salvia Stable locus 3434 No matrix
Perilla frutescensNepetoideae · Perilla Stable locus 3333 No matrix
Stenogyne calaminthoidesLamioideae · Stenogyne Stable locus 3333 No matrix
Cornutia pyramidataPremnoideae · Cornutia Stable locus 3030 No matrix
Dracocephalum rupestreNepetoideae · Dracocephalum Stable locus 3030 No matrix
Ocimum tenuiflorumNepetoideae · Ocimum Stable locus 2929 No matrix
Hyssopus officinalisNepetoideae · Hyssopus Stable locus 2828 No matrix
Prunella vulgarisNepetoideae · Prunella Stable locus 2828 No matrix
Clinopodium barosmumNepetoideae · Clinopodium Stable locus 2727 No matrix
Salvia divinorumNepetoideae · Salvia Stable locus 2727 No matrix
Hyptis suaveolensNepetoideae · Hyptis Stable locus 2626 No matrix
Plectranthus barbatusNepetoideae · Plectranthus Stable locus 2626 No matrix
Ajuga decumbensAjugoideae · Ajuga Stable locus 2525 No matrix
Petraeovitex bambusetoriumPeronematoideae · Petraeovitex Stable locus 2525 No matrix
Premna microphyllaPremnoideae · Premna Stable locus 2525 No matrix
Tectona grandisTectonoideae · Tectona Stable locus 2525 Available
Ballota pseudodictamnusLamioideae · Ballota Stable locus 2424 No matrix
Mosla chinensisNepetoideae · Mosla Stable locus 2424 No matrix
Westringia fruticosaProstantheroideae · Westringia Stable locus 2424 No matrix
Agastache rugosaNepetoideae · Agastache Stable locus 2323 No matrix
Glechoma hederaceaNepetoideae · Glechoma Stable locus 2323 No matrix
Phlomoides rotataLamioideae · Phlomoides Stable locus 2323 No matrix
Prostanthera lasianthosProstantheroideae · Prostanthera Stable locus 2323 No matrix
Rotheca myricoidesAjugoideae · Rotheca Stable locus 2323 No matrix
Marmoritis complanataNepetoideae · Marmoritis Stable locus 2222 No matrix
Thymus vulgarisNepetoideae · Thymus Stable locus 2222 No matrix
Vitex agnus-castusViticoideae · Vitex Stable locus 2222 No matrix
Callicarpa nudifloraCallicarpoideae · Callicarpa Stable locus 2121 No matrix
Drepanocaryum sewerzowiiNepetoideae · Drepanocaryum Stable locus 2121 No matrix
Isodon lophanthoidesNepetoideae · Isodon Stable locus 2121 No matrix
Melissa officinalisNepetoideae · Melissa Stable locus 2121 No matrix
Phlomis fruticosaLamioideae · Phlomis Stable locus 2121 No matrix
Clerodendrum bungeiAjugoideae · Clerodendrum Stable locus 2020 No matrix
Collinsonia canadensisNepetoideae · Collinsonia Stable locus 2020 No matrix
Congea tomentosaSymphorematoideae · Congea Stable locus 2020 No matrix
Isodon serraNepetoideae · Isodon Stable locus 2020 No matrix
Lavandula angustifoliaNepetoideae · Lavandula Stable locus 2020 No matrix
Marrubium vulgareLamioideae · Marrubium Stable locus 2020 No matrix
Monarda didymaNepetoideae · Monarda Stable locus 2020 No matrix
Mosla soochowensisNepetoideae · Mosla Stable locus 2020 No matrix
Salvia officinalisNepetoideae · Salvia Stable locus 2020 No matrix
Teucrium canadenseAjugoideae · Teucrium Stable locus 2020 No matrix
Holmskioldia sanguineaScutellarioideae · Holmskioldia Stable locus 1919 No matrix
Leonotis leonurusLamioideae · Leonotis Stable locus 1919 No matrix
Leonurus japonicusLamioideae · Leonurus Stable locus 1919 No matrix
Origanum majoranaNepetoideae · Origanum Stable locus 1919 No matrix
Scutellaria barbataScutellarioideae · Scutellaria Stable locus 1919 No matrix
Agastache foeniculumNepetoideae · Agastache Stable locus 1818 No matrix
Gmelina philippensisPremnoideae · Gmelina Stable locus 1818 No matrix
Leonurus sibiricusLamioideae · Leonurus Stable locus 1818 No matrix
Lycopus americanusNepetoideae · Lycopus Stable locus 1818 No matrix
Mentha x piperitaNepetoideae · Mentha Stable locus 1818 No matrix
Origanum vulgareNepetoideae · Origanum Stable locus 1818 No matrix
Salvia bowleyanaNepetoideae · Salvia Stable locus 1818 No matrix
Schizonepeta tenuifoliaNepetoideae · Schizonepeta Stable locus 1818 No matrix
Scutellaria baicalensisScutellarioideae · Scutellaria Stable locus 1818 No matrix
Ajuga reptansAjugoideae · Ajuga Stable locus 1717 No matrix
Glechoma longitubaNepetoideae · Glechoma Stable locus 1717 No matrix
Lamium albumLamioideae · Lamium Stable locus 1717 No matrix
Perovskia atriplicifoliaNepetoideae · Perovskia Stable locus 1717 No matrix
Salvia miltiorrhizaNepetoideae · Salvia Stable locus 1717 Available
Thymus quinquecostatusNepetoideae · Thymus Stable locus 1717 No matrix
Stachys officinalisLamioideae · Stachys Stable locus 1616 No matrix
Clinopodium gracileNepetoideae · Clinopodium Stable locus 1515 No matrix
Mentha spicataNepetoideae · Mentha Stable locus 1414 No matrix
Perilla citriodoraNepetoideae · Perilla Stable locus 1414 No matrix
Perilla frutescens var. hirtellaNepetoideae · Perilla Stable locus 1414 No matrix
Leonurus cardiacaLamioideae · Leonurus Stable locus 1313 No matrix
Salvia sclareaNepetoideae · Salvia Stable locus 1313 No matrix
Mentha longifoliaNepetoideae · Mentha Stable locus 1111 Available

Candidate records

Traceable candidate identifiers

Filter and inspect candidate identifiers for this family.

Clear
Candidate IDSpeciesPathway / familyEvidenceConfidenceIdentityHMM score
Mc1g08350.1
Mosla chinensisSteroid / sterol · SMO1_SMO2blast+hmm High 40.9%15.6
Mc1g36880.1
Mosla chinensisSteroid / sterol · SMO1_SMO2blast+hmm High 40.9%15.6
g11480.t1
Salvia sclareaSteroid / sterol · SMO1_SMO2blast+hmm High 52.3%15.6
evm.model.LG20.421
Clinopodium barosmumSteroid / sterol · SMO1_SMO2blast+hmm High 42.1%15.5
rna-gnl|WGS:QIYW|chr02_50051495_50054602.mrna1
Perilla citriodoraSteroid / sterol · SMO1_SMO2blast+hmm High 54.1%15.4
rna-gnl|WGS:QIYW|chr02_50051495_50054602.mrna1
Perilla frutescens var. hirtellaSteroid / sterol · SMO1_SMO2blast+hmm High 54.1%15.4
MESP_c41974_g1_i1_len_2223
Mentha spicataSteroid / sterol · SMO1_SMO2blast+hmm High 42.1%15.3
COPY_c63786_g1_i1_len_499
Cornutia pyramidataSteroid / sterol · SMO1_SMO2blast+hmm High 47.2%15.2
origanum_vulgare_723.g2.t1
Origanum vulgareSteroid / sterol · SMO1_SMO2blast+hmm Medium 91.2%467.2
Roff23680303880
Salvia rosmarinusSteroid / sterol · SMO1_SMO2blast+hmm Medium 94.9%282.9
Ls3g09030.1
Leonurus sibiricusSteroid / sterol · SMO1_SMO2blast+hmm Medium 87.3%247.7
PRLA_c69696_g1_i7_len_1120
Prostanthera lasianthosSteroid / sterol · SMO1_SMO2blast+hmm Medium 87.8%74.7
g10290.t1
Nepeta mussiniiSteroid / sterol · SMO1_SMO2blast+hmm Medium 78.4%68.5
evm.model.LG15.205
Clinopodium barosmumSteroid / sterol · SMO1_SMO2blast+hmm Medium 82.5%64.4
COCA_c14008_g1_i1_len_771
Collinsonia canadensisSteroid / sterol · SMO1_SMO2blast+hmm Medium 34.6%46.8
GMPH_c19948_g1_i2_len_768
Gmelina philippensisSteroid / sterol · SMO1_SMO2blast+hmm Medium 93.3%38.2
WEFR_c65631_g1_i1_len_551
Westringia fruticosaSteroid / sterol · SMO1_SMO2blast+hmm Medium 54.0%36.5
LYAM_c72557_g1_i1_len_338
Lycopus americanusSteroid / sterol · SMO1_SMO2blast+hmm Medium 44.7%35.3
Ls7g14800.1
Leonurus sibiricusSteroid / sterol · SMO1_SMO2blast+hmm Medium 54.5%22.5
PRMI_c129819_g1_i1_len_262
Premna microphyllaSteroid / sterol · SMO1_SMO2blast+hmm Medium 61.5%21.6
Lj10g04520.1
Leonurus japonicusSteroid / sterol · SMO1_SMO2blast+hmm Medium 49.8%17.6
AG34_scaffold1_21970T
Agastache rugosaSteroid / sterol · SMO1_SMO2blast+hmm Medium 51.3%17.1
1821.g73.t1
Ocimum basilicumSteroid / sterol · SMO1_SMO2blast+hmm Medium 42.3%15.2
PLBA_c46091_g1_i5_len_2163
Plectranthus barbatusSteroid / sterol · SMO1_SMO2blast+hmm Medium 54.9%15.2
546643.g1.t1
Ocimum basilicumSteroid / sterol · SMO1_SMO2blast+hmm Medium 41.9%15.1
546646.g1.t1
Ocimum basilicumSteroid / sterol · SMO1_SMO2blast+hmm Medium 41.9%15.1
COCA_c58675_g1_i1_len_2352
Collinsonia canadensisSteroid / sterol · SMO1_SMO2blast+hmm Medium 55.2%15.0
Clgra_011620-T1
Clinopodium gracileSteroid / sterol · SMO1_SMO2blast+hmm Medium 53.3%15.0
GMPH_c25277_g1_i1_len_656
Gmelina philippensisSteroid / sterol · SMO1_SMO2blast+hmm Medium 45.4%15.0
KAL1555385.1
Salvia divinorumSteroid / sterol · SMO1_SMO2blast+hmm Medium 53.6%15.0
ROMY_c76760_g3_i1_len_251
Rotheca myricoidesSteroid / sterol · SMO1_SMO2blast+hmm Medium 83.1%15.0
rna-gnl|WGS:QFCC|chr05_19168405_19171455.mrna1
Perilla frutescensSteroid / sterol · SMO1_SMO2blast+hmm Medium 53.7%14.8
HYSU_c25803_g1_i2_len_2118
Hyptis suaveolensSteroid / sterol · SMO1_SMO2blast+hmm Medium 42.9%14.7
LAAN_c41653_g1_i1_len_558
Lavandula angustifoliaSteroid / sterol · SMO1_SMO2blast+hmm Medium 43.2%14.7
PHFR_c68735_g2_i2_len_765
Phlomis fruticosaSteroid / sterol · SMO1_SMO2blast+hmm Medium 49.7%14.7
MODI_c38973_g1_i1_len_2320
Monarda didymaSteroid / sterol · SMO1_SMO2blast+hmm Medium 41.6%14.6
TECA_c10153_g1_i1_len_814
Teucrium canadenseSteroid / sterol · SMO1_SMO2blast+hmm Medium 46.2%14.6
rna-gnl|WGS:QFCC|chr01_74450480_74453498.mrna1
Perilla frutescensSteroid / sterol · SMO1_SMO2blast+hmm Medium 53.9%14.6
Mc5g24070.1
Mosla chinensisSteroid / sterol · SMO1_SMO2blast+hmm Medium 54.7%14.3
PLBA_c44270_g2_i1_len_863
Plectranthus barbatusSteroid / sterol · SMO1_SMO2blast+hmm Medium 49.7%14.1
rna-gnl|WGS:QFCC|chr16_43526523_43529451.mrna1
Perilla frutescensSteroid / sterol · SMO1_SMO2blast+hmm Medium 35.6%14.0
ORMA_c30122_g1_i1_len_525
Origanum majoranaSteroid / sterol · SMO1_SMO2blast+hmm Medium 44.8%13.9
BAPS_c25047_g1_i2_len_544
Ballota pseudodictamnusSteroid / sterol · SMO1_SMO2blast+hmm Medium 46.1%13.7
Ms_c006g01300.1
Mosla soochowensisSteroid / sterol · SMO1_SMO2blast+hmm Medium 55.3%13.6
MODI_c16216_g1_i1_len_683
Monarda didymaSteroid / sterol · SMO1_SMO2blast+hmm Medium 44.3%13.5
MAVU_c34497_g1_i1_len_673
Marrubium vulgareSteroid / sterol · SMO1_SMO2blast+hmm Medium 45.5%13.4
rna-gnl|WGS:QFCC|chr08_27986359_27989097.mrna1
Perilla frutescensSteroid / sterol · SMO1_SMO2blast+hmm Medium 35.6%13.1
rna-gnl|WGS:QIYW|chr04_34278051_34280787.mrna1
Perilla citriodoraSteroid / sterol · SMO1_SMO2blast+hmm Medium 35.6%13.1
rna-gnl|WGS:QIYW|chr04_34278051_34280787.mrna1
Perilla frutescens var. hirtellaSteroid / sterol · SMO1_SMO2blast+hmm Medium 35.6%13.1
rna-gnl|WGS:QFCC|chr01_55182309_55189417.mrna1
Perilla frutescensSteroid / sterol · SMO1_SMO2blast+hmm Medium 52.8%13.0