LamiOmicsDB Lamiaceae Multi-Omics Database
v1 808 species · 3 phylogenies · 6,313 sequences

Pathway-family scientific record

MCT_IspD

MCT / IspD enzyme-family module

This module includes PlantSME enzyme-family assignments and traceable candidate protein identifiers from genome-derived or transcriptome-derived protein sets.

Browse candidatesCompare speciesCSV
Stable locus plantsmeTerpenoid biosynthesis
Public candidate IDs
114
Species with candidates
77
Species with assignments
77
Source assignments
114
Gene-tree candidates
0
Motif candidates
0

Evidence profile

Available evidence layers

◆Candidate identifiers114 public species-linked identifiers can be inspected.
GTGene-tree workflow0 comparable source candidates; 0 high-confidence source calls.
MMotif-screen proxy0 motif-screen candidates; 0 with all required motif proxies.
100 kbLocal clustering proxy0 clusters across 0 species; maximum cluster size 0.

Comparative signature

Lamiaceae comparison fields

Rate delta
Not calculated
Prevalence delta
Not calculated
Comparable source
PlantSME family assignments
Comparable source count
114
Public candidate count
114
Evidence mode
plantsme

Species coverage

Assignment and locus coverage by species

Source family counts and public candidate identifiers are shown in separate columns.

SpeciesEvidence stateSource countCandidate IDsExpression
Nepeta catariaNepetoideae · Nepeta Stable locus 66 Available
Nepeta mussiniiNepetoideae · Nepeta Stable locus 44 Available
Pogostemon cablinLamioideae · Pogostemon Stable locus 44 Available
Salvia divinorumNepetoideae · Salvia Stable locus 44 No matrix
Teucrium chamaedrysAjugoideae · Teucrium Stable locus 44 No matrix
Cornutia pyramidataPremnoideae · Cornutia Stable locus 33 No matrix
Phlomis fruticosaLamioideae · Phlomis Stable locus 33 No matrix
Teucrium marumAjugoideae · Teucrium Stable locus 33 No matrix
Callicarpa americanaCallicarpoideae · Callicarpa Stable locus 22 No matrix
Clinopodium barosmumNepetoideae · Clinopodium Stable locus 22 No matrix
Dracocephalum rupestreNepetoideae · Dracocephalum Stable locus 22 No matrix
Elsholtzia splendensNepetoideae · Elsholtzia Stable locus 22 No matrix
Mentha longifoliaNepetoideae · Mentha Stable locus 22 Available
Ocimum basilicumNepetoideae · Ocimum Stable locus 22 Available
Origanum majoranaNepetoideae · Origanum Stable locus 22 No matrix
Perilla frutescensNepetoideae · Perilla Stable locus 22 No matrix
Rotheca myricoidesAjugoideae · Rotheca Stable locus 22 No matrix
Salvia miltiorrhizaNepetoideae · Salvia Stable locus 22 Available
Salvia rosmarinusNepetoideae · Salvia Stable locus 22 Available
Salvia splendensNepetoideae · Salvia Stable locus 22 No matrix
Stenogyne calaminthoidesLamioideae · Stenogyne Stable locus 22 No matrix
Tectona grandisTectonoideae · Tectona Stable locus 22 Available
Agastache foeniculumNepetoideae · Agastache Stable locus 11 No matrix
Agastache rugosaNepetoideae · Agastache Stable locus 11 No matrix
Ajuga decumbensAjugoideae · Ajuga Stable locus 11 No matrix
Ajuga reptansAjugoideae · Ajuga Stable locus 11 No matrix
Ballota pseudodictamnusLamioideae · Ballota Stable locus 11 No matrix
Callicarpa nudifloraCallicarpoideae · Callicarpa Stable locus 11 No matrix
Clerodendrum bungeiAjugoideae · Clerodendrum Stable locus 11 No matrix
Clinopodium gracileNepetoideae · Clinopodium Stable locus 11 No matrix
Collinsonia canadensisNepetoideae · Collinsonia Stable locus 11 No matrix
Congea tomentosaSymphorematoideae · Congea Stable locus 11 No matrix
Drepanocaryum sewerzowiiNepetoideae · Drepanocaryum Stable locus 11 No matrix
Glechoma hederaceaNepetoideae · Glechoma Stable locus 11 No matrix
Glechoma longitubaNepetoideae · Glechoma Stable locus 11 No matrix
Gmelina philippensisPremnoideae · Gmelina Stable locus 11 No matrix
Holmskioldia sanguineaScutellarioideae · Holmskioldia Stable locus 11 No matrix
Hyptis suaveolensNepetoideae · Hyptis Stable locus 11 No matrix
Hyssopus officinalisNepetoideae · Hyssopus Stable locus 11 No matrix
Isodon lophanthoidesNepetoideae · Isodon Stable locus 11 No matrix
Isodon serraNepetoideae · Isodon Stable locus 11 No matrix
Lamium albumLamioideae · Lamium Stable locus 11 No matrix
Lavandula angustifoliaNepetoideae · Lavandula Stable locus 11 No matrix
Leonotis leonurusLamioideae · Leonotis Stable locus 11 No matrix
Leonurus cardiacaLamioideae · Leonurus Stable locus 11 No matrix
Leonurus japonicusLamioideae · Leonurus Stable locus 11 No matrix
Leonurus sibiricusLamioideae · Leonurus Stable locus 11 No matrix
Lycopus americanusNepetoideae · Lycopus Stable locus 11 No matrix
Marmoritis complanataNepetoideae · Marmoritis Stable locus 11 No matrix
Marrubium vulgareLamioideae · Marrubium Stable locus 11 No matrix
Melissa officinalisNepetoideae · Melissa Stable locus 11 No matrix
Mentha spicataNepetoideae · Mentha Stable locus 11 No matrix
Mentha x piperitaNepetoideae · Mentha Stable locus 11 No matrix
Monarda didymaNepetoideae · Monarda Stable locus 11 No matrix
Mosla chinensisNepetoideae · Mosla Stable locus 11 No matrix
Mosla soochowensisNepetoideae · Mosla Stable locus 11 No matrix
Ocimum tenuiflorumNepetoideae · Ocimum Stable locus 11 No matrix
Origanum vulgareNepetoideae · Origanum Stable locus 11 No matrix
Perilla citriodoraNepetoideae · Perilla Stable locus 11 No matrix
Perilla frutescens var. hirtellaNepetoideae · Perilla Stable locus 11 No matrix
Perovskia atriplicifoliaNepetoideae · Perovskia Stable locus 11 No matrix
Petraeovitex bambusetoriumPeronematoideae · Petraeovitex Stable locus 11 No matrix
Phlomoides rotataLamioideae · Phlomoides Stable locus 11 No matrix
Plectranthus barbatusNepetoideae · Plectranthus Stable locus 11 No matrix
Prostanthera lasianthosProstantheroideae · Prostanthera Stable locus 11 No matrix
Prunella vulgarisNepetoideae · Prunella Stable locus 11 No matrix
Salvia hispanicaNepetoideae · Salvia Stable locus 11 No matrix
Salvia officinalisNepetoideae · Salvia Stable locus 11 No matrix
Salvia sclareaNepetoideae · Salvia Stable locus 11 No matrix
Schizonepeta tenuifoliaNepetoideae · Schizonepeta Stable locus 11 No matrix
Scutellaria baicalensisScutellarioideae · Scutellaria Stable locus 11 No matrix
Scutellaria barbataScutellarioideae · Scutellaria Stable locus 11 No matrix
Stachys officinalisLamioideae · Stachys Stable locus 11 No matrix
Teucrium canadenseAjugoideae · Teucrium Stable locus 11 No matrix
Thymus quinquecostatusNepetoideae · Thymus Stable locus 11 No matrix
Vitex agnus-castusViticoideae · Vitex Stable locus 11 No matrix
Westringia fruticosaProstantheroideae · Westringia Stable locus 11 No matrix

Candidate records

Traceable candidate identifiers

Filter and inspect candidate identifiers for this family.

Clear
Candidate IDSpeciesPathway / familyEvidenceConfidenceIdentityHMM score
HYSU_c7128_g1_i1_len_1309
Hyptis suaveolensTerpenoid · MCT_IspDblast+hmm High 74.2%272.5
LAAN_c46794_g1_i1_len_1217
Lavandula angustifoliaTerpenoid · MCT_IspDblast+hmm High 73.6%272.5
Clgra_026906-T1
Clinopodium gracileTerpenoid · MCT_IspDblast+hmm High 75.2%272.4
Lj6g07030.1
Leonurus japonicusTerpenoid · MCT_IspDblast+hmm High 73.0%272.4
GLHE_c60117_g1_i2_len_1348
Glechoma hederaceaTerpenoid · MCT_IspDblast+hmm High 84.9%272.3
ORMA_c48600_g1_i3_len_1475
Origanum majoranaTerpenoid · MCT_IspDblast+hmm High 83.3%272.3
g20923.t1
Ajuga decumbensTerpenoid · MCT_IspDblast+hmm High 79.1%272.3
Mlonscaffold_11_length_299437840021780.1.v1.326
Mentha longifoliaTerpenoid · MCT_IspDblast+hmm High 74.5%272.1
evm.model.LG20.910
Clinopodium barosmumTerpenoid · MCT_IspDblast+hmm High 82.0%272.1
origanum_vulgare_783.g2.t1
Origanum vulgareTerpenoid · MCT_IspDblast+hmm High 83.7%272.1
PEAT_c24827_g1_i1_len_1469
Perovskia atriplicifoliaTerpenoid · MCT_IspDblast+hmm High 74.5%272.0
ROMY_c76620_g1_i5_len_1216
Rotheca myricoidesTerpenoid · MCT_IspDblast+hmm High 71.0%272.0
g15661.t1
Nepeta catariaTerpenoid · MCT_IspDblast+hmm High 73.5%272.0
COCA_c66922_g1_i2_len_1357
Collinsonia canadensisTerpenoid · MCT_IspDblast+hmm High 75.3%271.9
Sbai9A1T192.1
Scutellaria baicalensisTerpenoid · MCT_IspDblast+hmm High 77.6%271.7
g48999.t1.1.5b2d4a26.1.5b2d6ae6
Nepeta catariaTerpenoid · MCT_IspDblast+hmm High 74.2%271.6
g14460.t1
Salvia sclareaTerpenoid · MCT_IspDblast+hmm High 73.7%271.5
MODI_c40755_g1_i1_len_1259
Monarda didymaTerpenoid · MCT_IspDblast+hmm High 74.2%271.3
Stenogyne_calaminthoides__EVM_prediction_HiC_scaffold_54.1144.mRNA1
Stenogyne calaminthoidesTerpenoid · MCT_IspDblast+hmm High 71.7%271.3
XP_047946421.1
Salvia hispanicaTerpenoid · MCT_IspDblast+hmm High 85.7%271.3
rna-gnl|WGS:QFCC|chr05_31608440_31612356.mrna1
Perilla frutescensTerpenoid · MCT_IspDblast+hmm High 75.3%271.3
rna-gnl|WGS:QIYW|chr02_35390530_35394447.mrna1
Perilla citriodoraTerpenoid · MCT_IspDblast+hmm High 75.3%271.3
rna-gnl|WGS:QIYW|chr02_35390530_35394447.mrna1
Perilla frutescens var. hirtellaTerpenoid · MCT_IspDblast+hmm High 75.3%271.3
Es5A.G045300.t1
Elsholtzia splendensTerpenoid · MCT_IspDblast+hmm High 76.5%271.2
Es5B.G048600.t1
Elsholtzia splendensTerpenoid · MCT_IspDblast+hmm High 76.5%271.2
Pat_B30G074100.m1
Pogostemon cablinTerpenoid · MCT_IspDblast+hmm High 80.2%271.1
g48999.t1
Nepeta catariaTerpenoid · MCT_IspDblast+hmm High 70.9%271.0
KAL1564887.1
Salvia divinorumTerpenoid · MCT_IspDblast+hmm High 86.1%270.9
XP_042064666.1
Salvia splendensTerpenoid · MCT_IspDblast+hmm High 85.7%270.9
GMPH_c32485_g1_i2_len_1452
Gmelina philippensisTerpenoid · MCT_IspDblast+hmm High 71.3%270.7
rna-gnl|WGS:QFCC|chr01_65076140_65080035.mrna1
Perilla frutescensTerpenoid · MCT_IspDblast+hmm High 75.0%270.7
scutellaria_barbata_GWHPAOTP016689
Scutellaria barbataTerpenoid · MCT_IspDblast+hmm High 70.9%270.6
Roff24170316180
Salvia rosmarinusTerpenoid · MCT_IspDblast+hmm High 88.2%270.5
KAL1564886.1
Salvia divinorumTerpenoid · MCT_IspDblast+hmm High 72.7%270.4
MEOF_c19440_g1_i3_len_1216
Melissa officinalisTerpenoid · MCT_IspDblast+hmm High 81.6%270.3
Ls1g08660.1
Leonurus sibiricusTerpenoid · MCT_IspDblast+hmm High 73.4%269.5
PEBA_c47537_g1_i1_len_1255
Petraeovitex bambusetoriumTerpenoid · MCT_IspDblast+hmm High 72.0%269.1
evm.model.chr8.4571
Prunella vulgarisTerpenoid · MCT_IspDblast+hmm High 81.6%269.1
PRLA_c60644_g1_i1_len_1286
Prostanthera lasianthosTerpenoid · MCT_IspDblast+hmm High 78.1%269.0
XP_042061696.1
Salvia splendensTerpenoid · MCT_IspDblast+hmm High 84.4%268.9
GWHPBJVA012156
Thymus quinquecostatusTerpenoid · MCT_IspDblast+hmm High 74.5%268.8
GlLon_025180-T1
Glechoma longitubaTerpenoid · MCT_IspDblast+hmm High 70.3%268.6
Dru_7G0026050.1
Dracocephalum rupestreTerpenoid · MCT_IspDblast+hmm High 86.2%268.2
STOF_c108845_g1_i1_len_1306
Stachys officinalisTerpenoid · MCT_IspDblast+hmm High 84.0%265.8
CAame04G0019860.v1.94
Callicarpa americanaTerpenoid · MCT_IspDblast+hmm High 66.5%265.3
Sch000024432
Schizonepeta tenuifoliaTerpenoid · MCT_IspDblast+hmm High 70.4%260.8
Stenogyne_calaminthoides__EVM_prediction_HiC_scaffold_32.20.mRNA1
Stenogyne calaminthoidesTerpenoid · MCT_IspDblast+hmm High 68.0%242.4
g11307.t1.1.5b2c7c7e
Nepeta mussiniiTerpenoid · MCT_IspDblast+hmm High 87.3%235.1
g11307.t1.1.5b2c7c7e.1.5b2c9582
Nepeta mussiniiTerpenoid · MCT_IspDblast+hmm High 87.3%235.1
g48999.t1.1.5b2d4a26
Nepeta catariaTerpenoid · MCT_IspDblast+hmm High 87.7%232.0