LamiOmicsDB Lamiaceae Multi-Omics Database
v1 808 species · 3 phylogenies · 6,313 sequences

Pathway-family scientific record

MVD

MVD enzyme-family module

This module includes PlantSME enzyme-family assignments and traceable candidate protein identifiers from genome-derived or transcriptome-derived protein sets.

Browse candidatesCompare speciesCSV
Stable locus plantsmeTerpenoid biosynthesis
Public candidate IDs
408
Species with candidates
80
Species with assignments
80
Source assignments
408
Gene-tree candidates
0
Motif candidates
0

Evidence profile

Available evidence layers

◆Candidate identifiers408 public species-linked identifiers can be inspected.
GTGene-tree workflow0 comparable source candidates; 0 high-confidence source calls.
MMotif-screen proxy0 motif-screen candidates; 0 with all required motif proxies.
100 kbLocal clustering proxy0 clusters across 0 species; maximum cluster size 0.

Comparative signature

Lamiaceae comparison fields

Rate delta
Not calculated
Prevalence delta
Not calculated
Comparable source
PlantSME family assignments
Comparable source count
408
Public candidate count
408
Evidence mode
plantsme

Species coverage

Assignment and locus coverage by species

Source family counts and public candidate identifiers are shown in separate columns.

SpeciesEvidence stateSource countCandidate IDsExpression
Pogostemon cablinLamioideae · Pogostemon Stable locus 1919 Available
Salvia splendensNepetoideae · Salvia Stable locus 1818 No matrix
Ocimum basilicumNepetoideae · Ocimum Stable locus 1313 Available
Nepeta catariaNepetoideae · Nepeta Stable locus 1212 Available
Phlomoides rotataLamioideae · Phlomoides Stable locus 1212 No matrix
Salvia rosmarinusNepetoideae · Salvia Stable locus 1111 Available
Prunella vulgarisNepetoideae · Prunella Stable locus 99 No matrix
Teucrium chamaedrysAjugoideae · Teucrium Stable locus 99 No matrix
Teucrium marumAjugoideae · Teucrium Stable locus 99 No matrix
Perilla frutescensNepetoideae · Perilla Stable locus 88 No matrix
Clinopodium barosmumNepetoideae · Clinopodium Stable locus 77 No matrix
Cornutia pyramidataPremnoideae · Cornutia Stable locus 77 No matrix
Hyssopus officinalisNepetoideae · Hyssopus Stable locus 77 No matrix
Rotheca myricoidesAjugoideae · Rotheca Stable locus 77 No matrix
Ajuga decumbensAjugoideae · Ajuga Stable locus 66 No matrix
Callicarpa americanaCallicarpoideae · Callicarpa Stable locus 66 No matrix
Elsholtzia splendensNepetoideae · Elsholtzia Stable locus 66 No matrix
Nepeta mussiniiNepetoideae · Nepeta Stable locus 66 Available
Stenogyne calaminthoidesLamioideae · Stenogyne Stable locus 66 No matrix
Teucrium canadenseAjugoideae · Teucrium Stable locus 66 No matrix
Callicarpa nudifloraCallicarpoideae · Callicarpa Stable locus 55 No matrix
Clerodendrum bungeiAjugoideae · Clerodendrum Stable locus 55 No matrix
Collinsonia canadensisNepetoideae · Collinsonia Stable locus 55 No matrix
Congea tomentosaSymphorematoideae · Congea Stable locus 55 No matrix
Gmelina philippensisPremnoideae · Gmelina Stable locus 55 No matrix
Hyptis suaveolensNepetoideae · Hyptis Stable locus 55 No matrix
Ocimum tenuiflorumNepetoideae · Ocimum Stable locus 55 No matrix
Origanum majoranaNepetoideae · Origanum Stable locus 55 No matrix
Phlomis fruticosaLamioideae · Phlomis Stable locus 55 No matrix
Plectranthus barbatusNepetoideae · Plectranthus Stable locus 55 No matrix
Premna microphyllaPremnoideae · Premna Stable locus 55 No matrix
Salvia divinorumNepetoideae · Salvia Stable locus 55 No matrix
Salvia miltiorrhizaNepetoideae · Salvia Stable locus 55 Available
Tectona grandisTectonoideae · Tectona Stable locus 55 Available
Vitex agnus-castusViticoideae · Vitex Stable locus 55 No matrix
Agastache rugosaNepetoideae · Agastache Stable locus 44 No matrix
Ajuga reptansAjugoideae · Ajuga Stable locus 44 No matrix
Glechoma longitubaNepetoideae · Glechoma Stable locus 44 No matrix
Holmskioldia sanguineaScutellarioideae · Holmskioldia Stable locus 44 No matrix
Lavandula angustifoliaNepetoideae · Lavandula Stable locus 44 No matrix
Marmoritis complanataNepetoideae · Marmoritis Stable locus 44 No matrix
Marrubium vulgareLamioideae · Marrubium Stable locus 44 No matrix
Mosla chinensisNepetoideae · Mosla Stable locus 44 No matrix
Mosla soochowensisNepetoideae · Mosla Stable locus 44 No matrix
Perilla citriodoraNepetoideae · Perilla Stable locus 44 No matrix
Perilla frutescens var. hirtellaNepetoideae · Perilla Stable locus 44 No matrix
Petraeovitex bambusetoriumPeronematoideae · Petraeovitex Stable locus 44 No matrix
Thymus vulgarisNepetoideae · Thymus Stable locus 44 No matrix
Westringia fruticosaProstantheroideae · Westringia Stable locus 44 No matrix
Agastache foeniculumNepetoideae · Agastache Stable locus 33 No matrix
Ballota pseudodictamnusLamioideae · Ballota Stable locus 33 No matrix
Clinopodium gracileNepetoideae · Clinopodium Stable locus 33 No matrix
Dracocephalum rupestreNepetoideae · Dracocephalum Stable locus 33 No matrix
Drepanocaryum sewerzowiiNepetoideae · Drepanocaryum Stable locus 33 No matrix
Glechoma hederaceaNepetoideae · Glechoma Stable locus 33 No matrix
Isodon lophanthoidesNepetoideae · Isodon Stable locus 33 No matrix
Isodon serraNepetoideae · Isodon Stable locus 33 No matrix
Lamium albumLamioideae · Lamium Stable locus 33 No matrix
Leonotis leonurusLamioideae · Leonotis Stable locus 33 No matrix
Leonurus cardiacaLamioideae · Leonurus Stable locus 33 No matrix
Leonurus japonicusLamioideae · Leonurus Stable locus 33 No matrix
Leonurus sibiricusLamioideae · Leonurus Stable locus 33 No matrix
Lycopus americanusNepetoideae · Lycopus Stable locus 33 No matrix
Melissa officinalisNepetoideae · Melissa Stable locus 33 No matrix
Mentha longifoliaNepetoideae · Mentha Stable locus 33 Available
Mentha spicataNepetoideae · Mentha Stable locus 33 No matrix
Mentha x piperitaNepetoideae · Mentha Stable locus 33 No matrix
Monarda didymaNepetoideae · Monarda Stable locus 33 No matrix
Origanum vulgareNepetoideae · Origanum Stable locus 33 No matrix
Perovskia atriplicifoliaNepetoideae · Perovskia Stable locus 33 No matrix
Prostanthera lasianthosProstantheroideae · Prostanthera Stable locus 33 No matrix
Salvia bowleyanaNepetoideae · Salvia Stable locus 33 No matrix
Salvia hispanicaNepetoideae · Salvia Stable locus 33 No matrix
Salvia officinalisNepetoideae · Salvia Stable locus 33 No matrix
Salvia sclareaNepetoideae · Salvia Stable locus 33 No matrix
Schizonepeta tenuifoliaNepetoideae · Schizonepeta Stable locus 33 No matrix
Scutellaria baicalensisScutellarioideae · Scutellaria Stable locus 33 No matrix
Scutellaria barbataScutellarioideae · Scutellaria Stable locus 33 No matrix
Stachys officinalisLamioideae · Stachys Stable locus 33 No matrix
Thymus quinquecostatusNepetoideae · Thymus Stable locus 33 No matrix

Candidate records

Traceable candidate identifiers

Filter and inspect candidate identifiers for this family.

Clear
Candidate IDSpeciesPathway / familyEvidenceConfidenceIdentityHMM score
XP_041994225.1
Salvia splendensTerpenoid · MVDblast+hmm High 82.3%807.5
Sch000014563
Schizonepeta tenuifoliaTerpenoid · MVDblast+hmm High 80.2%806.6
XP_041990440.1
Salvia splendensTerpenoid · MVDblast+hmm High 80.9%806.0
Stenogyne_calaminthoides__EVM_prediction_HiC_scaffold_8.681.mRNA1
Stenogyne calaminthoidesTerpenoid · MVDblast+hmm High 76.8%791.9
rna-gnl|WGS:QFCC|chr07_48363766_48367183.mrna1
Perilla frutescensTerpenoid · MVDblast+hmm High 81.1%787.8
AG34_scaffold2_15290T
Agastache rugosaTerpenoid · MVDblast+hmm High 76.9%741.2
ocimum_sanctum_Ote100230600041
Ocimum tenuiflorumTerpenoid · MVDblast+hmm High 76.5%740.0
ROMY_c79692_g1_i2_len_1241
Rotheca myricoidesTerpenoid · MVDblast+hmm High 84.8%739.8
Teum.09G018540.2
Teucrium marumTerpenoid · MVDblast+hmm High 85.6%717.0
g10499.t1.1.5b2d4a30
Nepeta catariaTerpenoid · MVDblast+hmm High 84.2%702.1
LAAN_c56747_g2_i2_len_1588
Lavandula angustifoliaTerpenoid · MVDblast+hmm High 85.3%670.6
CAame17G0023830.v1.94
Callicarpa americanaTerpenoid · MVDblast+hmm High 85.9%652.5
Teum.07G022520.1
Teucrium marumTerpenoid · MVDblast+hmm High 85.7%651.9
Teum.09G018540.4
Teucrium marumTerpenoid · MVDblast+hmm High 86.0%644.4
Lj2g08550.1
Leonurus japonicusTerpenoid · MVDblast+hmm High 76.5%642.3
g10577.t1.2.5b43bdc5
Hyssopus officinalisTerpenoid · MVDblast+hmm High 83.8%634.2
g14016.t1.1.5b2d4a33
Nepeta catariaTerpenoid · MVDblast+hmm High 84.6%633.4
g2338.t1.1.5b2c7c7e
Nepeta mussiniiTerpenoid · MVDblast+hmm High 84.2%630.5
Teum.09G018540.6
Teucrium marumTerpenoid · MVDblast+hmm High 85.6%609.8
Teum.09G018540.3
Teucrium marumTerpenoid · MVDblast+hmm High 85.9%609.2
Teum.09G018540.1
Teucrium marumTerpenoid · MVDblast+hmm High 85.9%608.3
Roff10260027420
Salvia rosmarinusTerpenoid · MVDblast+hmm High 85.4%594.3
Sbai1A403T97.1
Scutellaria baicalensisTerpenoid · MVDblast+hmm High 79.7%548.2
ocimum_sanctum_Ote100031480081
Ocimum tenuiflorumTerpenoid · MVDblast+hmm High 68.6%480.9
g10577.t1.2.5b43bdc5.1.5b44e323
Hyssopus officinalisTerpenoid · MVDblast+hmm High 86.2%477.8
19:ILLG3G115.98m1
Isodon lophanthoidesTerpenoid · MVDblast+hmm High 72.2%455.0
tectona_grandis_TgUn302g00030.t1
Tectona grandisTerpenoid · MVDblast+hmm High 68.6%450.4
ORMA_c38973_g1_i1_len_1944
Origanum majoranaTerpenoid · MVDblast+hmm High 79.8%391.0
XP_042026782.1
Salvia splendensTerpenoid · MVDblast+hmm High 65.7%384.5
PHFR_c78390_g1_i3_len_1787
Phlomis fruticosaTerpenoid · MVDblast+hmm High 80.0%381.6
TECA_c23383_g1_i1_len_485
Teucrium canadenseTerpenoid · MVDblast+hmm High 87.6%339.6
TECA_c26423_g1_i1_len_678
Teucrium canadenseTerpenoid · MVDblast+hmm High 85.2%328.7
tectona_grandis_TgUn910g00010.t1
Tectona grandisTerpenoid · MVDblast+hmm High 66.0%328.5
GMPH_c79980_g1_i1_len_393
Gmelina philippensisTerpenoid · MVDblast+hmm High 86.2%255.3
ROMY_c24538_g1_i1_len_528
Rotheca myricoidesTerpenoid · MVDblast+hmm High 88.2%244.9
ROMY_c54156_g1_i1_len_1492
Rotheca myricoidesTerpenoid · MVDblast+hmm High 81.6%227.0
COPY_c19046_g1_i1_len_340
Cornutia pyramidataTerpenoid · MVDblast+hmm High 86.7%225.1
COPY_c21559_g1_i1_len_328
Cornutia pyramidataTerpenoid · MVDblast+hmm High 85.3%211.8
g26916.t1
Ajuga decumbensTerpenoid · MVDblast+hmm High 77.9%211.6
CLBU_c104028_g1_i1_len_334
Clerodendrum bungeiTerpenoid · MVDblast+hmm High 72.1%163.5
evm.model.chr1.573
Prunella vulgarisTerpenoid · MVDblast+hmm High 53.7%157.9
COTO_c17263_g1_i1_len_345
Congea tomentosaTerpenoid · MVDblast+hmm High 68.5%147.2
LAAN_c41593_g1_i2_len_479
Lavandula angustifoliaTerpenoid · MVDblast+hmm High 73.5%131.4
HOSA_c16988_g1_i1_len_588
Holmskioldia sanguineaTerpenoid · MVDblast+hmm High 77.5%131.2
COCA_c77778_g1_i1_len_343
Collinsonia canadensisTerpenoid · MVDblast+hmm High 57.6%122.2
ORMA_c133948_g1_i1_len_346
Origanum majoranaTerpenoid · MVDblast+hmm High 52.9%117.4
VIAG_c34554_g1_i3_len_300
Vitex agnus-castusTerpenoid · MVDblast+hmm High 77.6%113.9
GMPH_c68970_g1_i1_len_374
Gmelina philippensisTerpenoid · MVDblast+hmm High 72.4%107.1
ROMY_c79692_g2_i1_len_384
Rotheca myricoidesTerpenoid · MVDblast+hmm High 70.7%72.3
VIAG_c11883_g1_i1_len_589
Vitex agnus-castusTerpenoid · MVDblast+hmm High 65.2%68.1