LamiOmicsDB Lamiaceae Multi-Omics Database
v1 808 species · 3 phylogenies · 6,313 sequences

Pathway-family scientific record

MVK

MVK enzyme-family module

This module includes PlantSME enzyme-family assignments and traceable candidate protein identifiers from genome-derived or transcriptome-derived protein sets.

Browse candidatesCompare speciesCSV
Stable locus plantsmeTerpenoid biosynthesis
Public candidate IDs
146
Species with candidates
80
Species with assignments
80
Source assignments
146
Gene-tree candidates
0
Motif candidates
0

Evidence profile

Available evidence layers

◆Candidate identifiers146 public species-linked identifiers can be inspected.
GTGene-tree workflow0 comparable source candidates; 0 high-confidence source calls.
MMotif-screen proxy0 motif-screen candidates; 0 with all required motif proxies.
100 kbLocal clustering proxy0 clusters across 0 species; maximum cluster size 0.

Comparative signature

Lamiaceae comparison fields

Rate delta
Not calculated
Prevalence delta
Not calculated
Comparable source
PlantSME family assignments
Comparable source count
146
Public candidate count
146
Evidence mode
plantsme

Species coverage

Assignment and locus coverage by species

Source family counts and public candidate identifiers are shown in separate columns.

SpeciesEvidence stateSource countCandidate IDsExpression
Salvia splendensNepetoideae · Salvia Stable locus 1111 No matrix
Ocimum basilicumNepetoideae · Ocimum Stable locus 88 Available
Nepeta catariaNepetoideae · Nepeta Stable locus 66 Available
Pogostemon cablinLamioideae · Pogostemon Stable locus 55 Available
Salvia divinorumNepetoideae · Salvia Stable locus 55 No matrix
Cornutia pyramidataPremnoideae · Cornutia Stable locus 44 No matrix
Glechoma longitubaNepetoideae · Glechoma Stable locus 44 No matrix
Origanum majoranaNepetoideae · Origanum Stable locus 33 No matrix
Phlomoides rotataLamioideae · Phlomoides Stable locus 33 No matrix
Rotheca myricoidesAjugoideae · Rotheca Stable locus 33 No matrix
Salvia rosmarinusNepetoideae · Salvia Stable locus 33 Available
Teucrium chamaedrysAjugoideae · Teucrium Stable locus 33 No matrix
Teucrium marumAjugoideae · Teucrium Stable locus 33 No matrix
Ballota pseudodictamnusLamioideae · Ballota Stable locus 22 No matrix
Clerodendrum bungeiAjugoideae · Clerodendrum Stable locus 22 No matrix
Clinopodium barosmumNepetoideae · Clinopodium Stable locus 22 No matrix
Elsholtzia splendensNepetoideae · Elsholtzia Stable locus 22 No matrix
Glechoma hederaceaNepetoideae · Glechoma Stable locus 22 No matrix
Gmelina philippensisPremnoideae · Gmelina Stable locus 22 No matrix
Hyptis suaveolensNepetoideae · Hyptis Stable locus 22 No matrix
Lamium albumLamioideae · Lamium Stable locus 22 No matrix
Marrubium vulgareLamioideae · Marrubium Stable locus 22 No matrix
Mentha spicataNepetoideae · Mentha Stable locus 22 No matrix
Nepeta mussiniiNepetoideae · Nepeta Stable locus 22 Available
Ocimum tenuiflorumNepetoideae · Ocimum Stable locus 22 No matrix
Perilla frutescensNepetoideae · Perilla Stable locus 22 No matrix
Phlomis fruticosaLamioideae · Phlomis Stable locus 22 No matrix
Prunella vulgarisNepetoideae · Prunella Stable locus 22 No matrix
Salvia hispanicaNepetoideae · Salvia Stable locus 22 No matrix
Salvia miltiorrhizaNepetoideae · Salvia Stable locus 22 Available
Thymus vulgarisNepetoideae · Thymus Stable locus 22 No matrix
Agastache foeniculumNepetoideae · Agastache Stable locus 11 No matrix
Agastache rugosaNepetoideae · Agastache Stable locus 11 No matrix
Ajuga decumbensAjugoideae · Ajuga Stable locus 11 No matrix
Ajuga reptansAjugoideae · Ajuga Stable locus 11 No matrix
Callicarpa americanaCallicarpoideae · Callicarpa Stable locus 11 No matrix
Callicarpa nudifloraCallicarpoideae · Callicarpa Stable locus 11 No matrix
Clinopodium gracileNepetoideae · Clinopodium Stable locus 11 No matrix
Collinsonia canadensisNepetoideae · Collinsonia Stable locus 11 No matrix
Congea tomentosaSymphorematoideae · Congea Stable locus 11 No matrix
Dracocephalum rupestreNepetoideae · Dracocephalum Stable locus 11 No matrix
Drepanocaryum sewerzowiiNepetoideae · Drepanocaryum Stable locus 11 No matrix
Holmskioldia sanguineaScutellarioideae · Holmskioldia Stable locus 11 No matrix
Hyssopus officinalisNepetoideae · Hyssopus Stable locus 11 No matrix
Isodon lophanthoidesNepetoideae · Isodon Stable locus 11 No matrix
Isodon serraNepetoideae · Isodon Stable locus 11 No matrix
Lavandula angustifoliaNepetoideae · Lavandula Stable locus 11 No matrix
Leonotis leonurusLamioideae · Leonotis Stable locus 11 No matrix
Leonurus cardiacaLamioideae · Leonurus Stable locus 11 No matrix
Leonurus japonicusLamioideae · Leonurus Stable locus 11 No matrix
Leonurus sibiricusLamioideae · Leonurus Stable locus 11 No matrix
Lycopus americanusNepetoideae · Lycopus Stable locus 11 No matrix
Marmoritis complanataNepetoideae · Marmoritis Stable locus 11 No matrix
Melissa officinalisNepetoideae · Melissa Stable locus 11 No matrix
Mentha longifoliaNepetoideae · Mentha Stable locus 11 Available
Mentha x piperitaNepetoideae · Mentha Stable locus 11 No matrix
Monarda didymaNepetoideae · Monarda Stable locus 11 No matrix
Mosla chinensisNepetoideae · Mosla Stable locus 11 No matrix
Mosla soochowensisNepetoideae · Mosla Stable locus 11 No matrix
Origanum vulgareNepetoideae · Origanum Stable locus 11 No matrix
Perilla citriodoraNepetoideae · Perilla Stable locus 11 No matrix
Perilla frutescens var. hirtellaNepetoideae · Perilla Stable locus 11 No matrix
Perovskia atriplicifoliaNepetoideae · Perovskia Stable locus 11 No matrix
Petraeovitex bambusetoriumPeronematoideae · Petraeovitex Stable locus 11 No matrix
Plectranthus barbatusNepetoideae · Plectranthus Stable locus 11 No matrix
Premna microphyllaPremnoideae · Premna Stable locus 11 No matrix
Prostanthera lasianthosProstantheroideae · Prostanthera Stable locus 11 No matrix
Salvia bowleyanaNepetoideae · Salvia Stable locus 11 No matrix
Salvia officinalisNepetoideae · Salvia Stable locus 11 No matrix
Salvia sclareaNepetoideae · Salvia Stable locus 11 No matrix
Schizonepeta tenuifoliaNepetoideae · Schizonepeta Stable locus 11 No matrix
Scutellaria baicalensisScutellarioideae · Scutellaria Stable locus 11 No matrix
Scutellaria barbataScutellarioideae · Scutellaria Stable locus 11 No matrix
Stachys officinalisLamioideae · Stachys Stable locus 11 No matrix
Stenogyne calaminthoidesLamioideae · Stenogyne Stable locus 11 No matrix
Tectona grandisTectonoideae · Tectona Stable locus 11 Available
Teucrium canadenseAjugoideae · Teucrium Stable locus 11 No matrix
Thymus quinquecostatusNepetoideae · Thymus Stable locus 11 No matrix
Vitex agnus-castusViticoideae · Vitex Stable locus 11 No matrix
Westringia fruticosaProstantheroideae · Westringia Stable locus 11 No matrix

Candidate records

Traceable candidate identifiers

Filter and inspect candidate identifiers for this family.

Clear
Candidate IDSpeciesPathway / familyEvidenceConfidenceIdentityHMM score
Sch000018026
Schizonepeta tenuifoliaTerpenoid · MVKblast+hmm High 66.8%41.8
Smil02G0032470.1.v1.484
Salvia miltiorrhizaTerpenoid · MVKblast+hmm High 68.3%41.8
SmilGWHAOSJ000005730007610.1.v1.484
Salvia miltiorrhizaTerpenoid · MVKblast+hmm High 64.7%41.8
XP_042054085.1
Salvia splendensTerpenoid · MVKblast+hmm High 65.7%41.8
XP_042054086.1
Salvia splendensTerpenoid · MVKblast+hmm High 65.7%41.8
XP_042054088.1
Salvia splendensTerpenoid · MVKblast+hmm High 65.7%41.8
XP_047958770.1
Salvia hispanicaTerpenoid · MVKblast+hmm High 66.2%41.8
g15055.t1
Hyssopus officinalisTerpenoid · MVKblast+hmm High 65.7%41.8
GlLon_033809-T1
Glechoma longitubaTerpenoid · MVKblast+hmm High 66.2%41.7
XP_042054084.1
Salvia splendensTerpenoid · MVKblast+hmm High 67.1%41.7
evm.model.LG12.70
Clinopodium barosmumTerpenoid · MVKblast+hmm High 66.5%41.6
DRSE_g23219.t1
Drepanocaryum sewerzowiiTerpenoid · MVKblast+hmm High 66.0%41.5
ORMA_c25422_g1_i1_len_1656
Origanum majoranaTerpenoid · MVKblast+hmm High 66.5%41.5
THVU_c71687_g2_i2_len_1648
Thymus vulgarisTerpenoid · MVKblast+hmm High 66.5%41.5
g21605.t1
Nepeta mussiniiTerpenoid · MVKblast+hmm High 66.5%41.5
origanum_vulgare_256.g27.t1
Origanum vulgareTerpenoid · MVKblast+hmm High 67.0%41.5
AG34_scaffold6_21690T
Agastache rugosaTerpenoid · MVKblast+hmm High 65.7%41.2
GWHPBJVA007836
Thymus quinquecostatusTerpenoid · MVKblast+hmm High 66.2%40.8
AGFO_c11842_g1_i2_len_1524
Agastache foeniculumTerpenoid · MVKblast+hmm High 67.3%40.6
GLHE_c66014_g1_i1_len_1510
Glechoma hederaceaTerpenoid · MVKblast+hmm High 66.5%40.4
GlLon_023864-T1
Glechoma longitubaTerpenoid · MVKblast+hmm High 66.2%40.4
evm.model.chr1.1175
Prunella vulgarisTerpenoid · MVKblast+hmm High 66.0%39.3
ocimum_sanctum_Ote100237520121
Ocimum tenuiflorumTerpenoid · MVKblast+hmm High 62.0%37.0
ocimum_sanctum_Ote100196100081
Ocimum tenuiflorumTerpenoid · MVKblast+hmm High 54.5%36.4
GlLon_035043-T1
Glechoma longitubaTerpenoid · MVKblast+hmm High 64.1%35.9
Roff10270030260
Salvia rosmarinusTerpenoid · MVKblast+hmm High 67.3%35.9
HYSU_c2451_g1_i1_len_316
Hyptis suaveolensTerpenoid · MVKblast+hmm High 68.3%34.8
Teum.02G024140.2
Teucrium marumTerpenoid · MVKblast+hmm High 53.6%31.7
BAPS_c51155_g1_i1_len_728
Ballota pseudodictamnusTerpenoid · MVKblast+hmm High 34.2%29.3
LAAL_c45015_g1_i1_len_274
Lamium albumTerpenoid · MVKblast+hmm High 37.9%22.5
KAL8510954.1
Phlomoides rotataTerpenoid · MVKblast+hmm High 42.9%20.7
ORMA_c13033_g1_i1_len_779
Origanum majoranaTerpenoid · MVKblast+hmm High 34.1%20.4
KAL8537261.1
Phlomoides rotataTerpenoid · MVKblast+hmm Medium 47.0%23.6
CLBU_c21698_g1_i1_len_367
Clerodendrum bungeiTerpenoid · MVKblast Medium 67.4%—
COPY_c114269_g1_i1_len_292
Cornutia pyramidataTerpenoid · MVKblast Medium 38.6%—
GLHE_c132002_g1_i1_len_393
Glechoma hederaceaTerpenoid · MVKblast Medium 37.7%—
GMPH_c32470_g1_i1_len_533
Gmelina philippensisTerpenoid · MVKblast Medium 71.2%—
MAVU_c26650_g2_i3_len_551
Marrubium vulgareTerpenoid · MVKblast Medium 75.6%—
MESP_c70106_g1_i1_len_379
Mentha spicataTerpenoid · MVKblast Medium 39.3%—
ORMA_c21958_g1_i1_len_516
Origanum majoranaTerpenoid · MVKblast Medium 39.5%—
ROMY_c60304_g1_i1_len_399
Rotheca myricoidesTerpenoid · MVKblast Medium 66.0%—
ROMY_c67690_g1_i1_len_433
Rotheca myricoidesTerpenoid · MVKblast Medium 67.5%—
THVU_c3953_g1_i1_len_288
Thymus vulgarisTerpenoid · MVKblast Medium 35.8%—
COPY_c83222_g1_i1_len_327
Cornutia pyramidataTerpenoid · MVKhmm Medium —24.3
COPY_c35759_g1_i2_len_355
Cornutia pyramidataTerpenoid · MVKhmm Medium —16.7
PHFR_c121087_g1_i1_len_288
Phlomis fruticosaTerpenoid · MVKhmm Medium —16.3