Pathway-family scientific record

`TPS`

Terpene synthase family

This module includes PlantSME enzyme-family assignments and traceable candidate protein identifiers from genome-derived or transcriptome-derived protein sets.

Browse candidates Compare species CSV

Stable locus plantsmeTerpenoid biosynthesis

Public candidate IDs: 4,886
Species with candidates: 80
Species with assignments: 80
Source assignments: 7,439
Gene-tree candidates: 0
Motif candidates: 1,428

Evidence profile

Available evidence layers

◆Candidate identifiers4,886 public species-linked identifiers can be inspected.

GTGene-tree workflow0 comparable source candidates; 0 high-confidence source calls.

MMotif-screen proxy1,428 motif-screen candidates; 744 with all required motif proxies.

100 kbLocal clustering proxy133 clusters across 4 species; maximum cluster size 14.

Comparative signature

Lamiaceae comparison fields

Rate delta: 0.669 · higher in Lamiaceae
Prevalence delta: 0
Comparable source: PlantSME family assignments
Comparable source count: 7,439
Public candidate count: 4,886
Evidence mode: plantsme

Species coverage

Assignment and locus coverage by species

Source family counts and public candidate identifiers are shown in separate columns.

Species	Evidence state	Source count	Candidate IDs	Expression
Ocimum basilicumNepetoideae · Ocimum	Stable locus	337	320	Available
Pogostemon cablinLamioideae · Pogostemon	Stable locus	351	313	Available
Callicarpa americanaCallicarpoideae · Callicarpa	Stable locus	132	159	No matrix
Nepeta catariaNepetoideae · Nepeta	Stable locus	145	125	Available
Nepeta mussiniiNepetoideae · Nepeta	Stable locus	114	118	Available
Perilla citriodoraNepetoideae · Perilla	Stable locus	75	115	No matrix
Salvia rosmarinusNepetoideae · Salvia	Stable locus	65	111	Available
Salvia miltiorrhizaNepetoideae · Salvia	Stable locus	70	107	Available
Mentha longifoliaNepetoideae · Mentha	Stable locus	61	100	Available
Tectona grandisTectonoideae · Tectona	Stable locus	96	86	Available
Origanum vulgareNepetoideae · Origanum	Stable locus	93	80	No matrix
Salvia bowleyanaNepetoideae · Salvia	Stable locus	72	66	No matrix
Salvia hispanicaNepetoideae · Salvia	Stable locus	537	50	No matrix
Teucrium chamaedrysAjugoideae · Teucrium	Stable locus	354	50	No matrix
Salvia splendensNepetoideae · Salvia	Stable locus	277	50	No matrix
Teucrium marumAjugoideae · Teucrium	Stable locus	204	50	No matrix
Dracocephalum rupestreNepetoideae · Dracocephalum	Stable locus	200	50	No matrix
Glechoma longitubaNepetoideae · Glechoma	Stable locus	173	50	No matrix
Hyssopus officinalisNepetoideae · Hyssopus	Stable locus	170	50	No matrix
Isodon lophanthoidesNepetoideae · Isodon	Stable locus	140	50	No matrix
Salvia divinorumNepetoideae · Salvia	Stable locus	123	50	No matrix
Perilla frutescensNepetoideae · Perilla	Stable locus	117	50	No matrix
Stenogyne calaminthoidesLamioideae · Stenogyne	Stable locus	116	50	No matrix
Isodon serraNepetoideae · Isodon	Stable locus	113	50	No matrix
Elsholtzia splendensNepetoideae · Elsholtzia	Stable locus	108	50	No matrix
Ocimum tenuiflorumNepetoideae · Ocimum	Stable locus	104	50	No matrix
Mosla chinensisNepetoideae · Mosla	Stable locus	92	50	No matrix
Marmoritis complanataNepetoideae · Marmoritis	Stable locus	83	50	No matrix
Mentha x piperitaNepetoideae · Mentha	Stable locus	83	50	No matrix
Phlomoides rotataLamioideae · Phlomoides	Stable locus	82	50	No matrix
Schizonepeta tenuifoliaNepetoideae · Schizonepeta	Stable locus	82	50	No matrix
Vitex agnus-castusViticoideae · Vitex	Stable locus	82	50	No matrix
Callicarpa nudifloraCallicarpoideae · Callicarpa	Stable locus	80	50	No matrix
Thymus quinquecostatusNepetoideae · Thymus	Stable locus	78	50	No matrix
Glechoma hederaceaNepetoideae · Glechoma	Stable locus	77	50	No matrix
Perilla frutescens var. hirtellaNepetoideae · Perilla	Stable locus	75	50	No matrix
Mosla soochowensisNepetoideae · Mosla	Stable locus	72	50	No matrix
Prunella vulgarisNepetoideae · Prunella	Stable locus	72	50	No matrix
Clinopodium gracileNepetoideae · Clinopodium	Stable locus	71	50	No matrix
Hyptis suaveolensNepetoideae · Hyptis	Stable locus	71	50	No matrix
Plectranthus barbatusNepetoideae · Plectranthus	Stable locus	71	50	No matrix
Agastache rugosaNepetoideae · Agastache	Stable locus	69	50	No matrix
Clinopodium barosmumNepetoideae · Clinopodium	Stable locus	68	50	No matrix
Stachys officinalisLamioideae · Stachys	Stable locus	68	50	No matrix
Ballota pseudodictamnusLamioideae · Ballota	Stable locus	64	50	No matrix
Scutellaria baicalensisScutellarioideae · Scutellaria	Stable locus	64	50	No matrix
Lamium albumLamioideae · Lamium	Stable locus	63	50	No matrix
Salvia officinalisNepetoideae · Salvia	Stable locus	62	50	No matrix
Leonurus japonicusLamioideae · Leonurus	Stable locus	61	50	No matrix
Mentha spicataNepetoideae · Mentha	Stable locus	61	50	No matrix
Ajuga decumbensAjugoideae · Ajuga	Stable locus	60	50	No matrix
Premna microphyllaPremnoideae · Premna	Stable locus	60	50	No matrix
Leonurus sibiricusLamioideae · Leonurus	Stable locus	58	50	No matrix
Phlomis fruticosaLamioideae · Phlomis	Stable locus	56	50	No matrix
Leonurus cardiacaLamioideae · Leonurus	Stable locus	55	50	No matrix
Cornutia pyramidataPremnoideae · Cornutia	Stable locus	54	50	No matrix
Drepanocaryum sewerzowiiNepetoideae · Drepanocaryum	Stable locus	54	50	No matrix
Origanum majoranaNepetoideae · Origanum	Stable locus	54	50	No matrix
Lavandula angustifoliaNepetoideae · Lavandula	Stable locus	52	50	No matrix
Leonotis leonurusLamioideae · Leonotis	Stable locus	52	50	No matrix
Rotheca myricoidesAjugoideae · Rotheca	Stable locus	48	48	No matrix
Melissa officinalisNepetoideae · Melissa	Stable locus	47	47	No matrix
Prostanthera lasianthosProstantheroideae · Prostanthera	Stable locus	47	47	No matrix
Ajuga reptansAjugoideae · Ajuga	Stable locus	46	46	No matrix
Gmelina philippensisPremnoideae · Gmelina	Stable locus	46	46	No matrix
Scutellaria barbataScutellarioideae · Scutellaria	Stable locus	46	46	No matrix
Perovskia atriplicifoliaNepetoideae · Perovskia	Stable locus	45	45	No matrix
Thymus vulgarisNepetoideae · Thymus	Stable locus	45	45	No matrix
Collinsonia canadensisNepetoideae · Collinsonia	Stable locus	42	42	No matrix
Monarda didymaNepetoideae · Monarda	Stable locus	41	41	No matrix
Holmskioldia sanguineaScutellarioideae · Holmskioldia	Stable locus	40	40	No matrix
Marrubium vulgareLamioideae · Marrubium	Stable locus	39	39	No matrix
Petraeovitex bambusetoriumPeronematoideae · Petraeovitex	Stable locus	38	38	No matrix
Clerodendrum bungeiAjugoideae · Clerodendrum	Stable locus	37	37	No matrix
Lycopus americanusNepetoideae · Lycopus	Stable locus	37	37	No matrix
Teucrium canadenseAjugoideae · Teucrium	Stable locus	36	36	No matrix
Agastache foeniculumNepetoideae · Agastache	Stable locus	34	34	No matrix
Congea tomentosaSymphorematoideae · Congea	Stable locus	33	33	No matrix
Westringia fruticosaProstantheroideae · Westringia	Stable locus	30	30	No matrix
Salvia sclareaNepetoideae · Salvia	Stable locus	9	9	No matrix

Candidate records

Traceable candidate identifiers

Filter and inspect candidate identifiers for this family.

Candidate ID	Species	Pathway / family	Evidence	Confidence	Identity	HMM score
MACO_g17847.t2	Marmoritis complanata	Terpenoid · `TPS`	blast+hmm	High	68.9%	708.8
Es6A.G017200.t1	Elsholtzia splendens	Terpenoid · `TPS`	blast+hmm	High	69.4%	708.7
Es6B.G016700.t1	Elsholtzia splendens	Terpenoid · `TPS`	blast+hmm	High	68.7%	708.5
CAame16G0000470.v1.94	Callicarpa americana	Terpenoid · `TPS`	blast+hmm	High	63.5%	708.4
CAame16G0005460.v1.94	Callicarpa americana	Terpenoid · `TPS`	blast+hmm	High	63.5%	708.4
evm.model.ptg000005l.862	Isodon serra	Terpenoid · `TPS`	blast+hmm	High	63.9%	708.4
rna-gnl\|WGS:QIYW\|chr01_07373644_07377028.mrna1	Perilla citriodora	Terpenoid · `TPS`	blast+hmm	High	78.8%	708.4
rna-gnl\|WGS:QIYW\|chr01_07373644_07377028.mrna1	Perilla frutescens var. hirtella	Terpenoid · `TPS`	blast+hmm	High	78.8%	708.4
scutellaria_barbata_GWHPAOTP026062	Scutellaria barbata	Terpenoid · `TPS`	blast+hmm	High	59.1%	708.4
PLBA_c45521_g1_i1_len_1885	Plectranthus barbatus	Terpenoid · `TPS`	blast+hmm	High	66.5%	708.2
XP_047977602.1	Salvia hispanica	Terpenoid · `TPS`	blast+hmm	High	73.6%	707.9
origanum_vulgare_488.g11.t1	Origanum vulgare	Terpenoid · `TPS`	blast+hmm	High	80.3%	707.4
tectona_grandis_Tg18g09330.t1	Tectona grandis	Terpenoid · `TPS`	blast+hmm	High	67.6%	707.4
CAame03G0027240.v1.94	Callicarpa americana	Terpenoid · `TPS`	blast+hmm	High	64.8%	707.0
g39145.t1	Hyssopus officinalis	Terpenoid · `TPS`	blast+hmm	High	77.4%	706.9
AG34_scaffold7_05290T	Agastache rugosa	Terpenoid · `TPS`	blast+hmm	High	70.7%	706.6
Teucrium_chamaedrys__Tcha185272	Teucrium chamaedrys	Terpenoid · `TPS`	blast+hmm	High	57.9%	705.8
Es7B.G006400.t1	Elsholtzia splendens	Terpenoid · `TPS`	blast+hmm	High	70.9%	705.7
ROMY_c76985_g1_i3_len_1848	Rotheca myricoides	Terpenoid · `TPS`	blast+hmm	High	60.7%	705.4
rna-gnl\|WGS:QFCC\|chr11_07288359_07293281.mrna1	Perilla frutescens	Terpenoid · `TPS`	blast+hmm	High	73.1%	705.3
evm.model.Chr07.1064	Callicarpa nudiflora	Terpenoid · `TPS`	blast+hmm	High	61.2%	704.6
AGFO_c26705_g3_i1_len_1861	Agastache foeniculum	Terpenoid · `TPS`	blast+hmm	High	77.7%	704.5
520.g188.t1	Ocimum basilicum	Terpenoid · `TPS`	blast+hmm	High	51.7%	704.4
Clgra_036877-T1	Clinopodium gracile	Terpenoid · `TPS`	blast+hmm	High	74.8%	704.2
Smil00G0043450.1.v1.484	Salvia miltiorrhiza	Terpenoid · `TPS`	blast+hmm	High	71.1%	704.2
rna-gnl\|WGS:QIYW\|chr05_01388606_01392813.mrna1	Perilla citriodora	Terpenoid · `TPS`	blast+hmm	High	68.9%	704.2
rna-gnl\|WGS:QIYW\|chr05_01388606_01392813.mrna1	Perilla frutescens var. hirtella	Terpenoid · `TPS`	blast+hmm	High	68.9%	704.2
rna-gnl\|WGS:QFCC\|chr01_01542789_01546977.mrna1	Perilla frutescens	Terpenoid · `TPS`	blast+hmm	High	68.9%	704.1
Mc5g19990.1	Mosla chinensis	Terpenoid · `TPS`	blast+hmm	High	74.2%	703.9
Teucrium_chamaedrys__Tcha43878	Teucrium chamaedrys	Terpenoid · `TPS`	blast+hmm	High	59.3%	703.8
rna-gnl\|WGS:QFCC\|chr03_65857958_65867932.mrna1	Perilla frutescens	Terpenoid · `TPS`	blast+hmm	High	96.5%	703.6
GLHE_c65827_g2_i3_len_2054	Glechoma hederacea	Terpenoid · `TPS`	blast+hmm	High	71.1%	703.3
GWHPBJVA027408	Thymus quinquecostatus	Terpenoid · `TPS`	blast+hmm	High	78.3%	703.3
CAame02G0004480.v1.94	Callicarpa americana	Terpenoid · `TPS`	blast+hmm	High	61.8%	702.6
g15352.t1	Nepeta cataria	Terpenoid · `TPS`	blast+hmm	High	66.4%	702.5
tectona_grandis_Tg06g01370.t1	Tectona grandis	Terpenoid · `TPS`	blast+hmm	High	67.5%	702.5
Lj7g08780.1	Leonurus japonicus	Terpenoid · `TPS`	blast+hmm	High	50.2%	702.4
rna-gnl\|WGS:QIYW\|chr01_07416213_07420943.mrna1	Perilla citriodora	Terpenoid · `TPS`	blast+hmm	High	99.8%	702.4
rna-gnl\|WGS:QIYW\|chr01_07416213_07420943.mrna1	Perilla frutescens var. hirtella	Terpenoid · `TPS`	blast+hmm	High	99.8%	702.4
AG34_scaffold1_21150T	Agastache rugosa	Terpenoid · `TPS`	blast+hmm	High	76.9%	702.3
XP_042059917.1	Salvia splendens	Terpenoid · `TPS`	blast+hmm	High	74.3%	702.3
AGFO_c26705_g1_i1_len_1873	Agastache foeniculum	Terpenoid · `TPS`	blast+hmm	High	76.9%	702.2
g39155.t1	Hyssopus officinalis	Terpenoid · `TPS`	blast+hmm	High	76.8%	702.2
rna-gnl\|WGS:QFCC\|chr04_65007540_65013695.mrna1	Perilla frutescens	Terpenoid · `TPS`	blast+hmm	High	72.6%	702.2
rna-gnl\|WGS:QIYW\|chr03_02867110_02873223.mrna1	Perilla citriodora	Terpenoid · `TPS`	blast+hmm	High	72.6%	702.2
rna-gnl\|WGS:QIYW\|chr03_02867110_02873223.mrna1	Perilla frutescens var. hirtella	Terpenoid · `TPS`	blast+hmm	High	72.6%	702.2
tectona_grandis_TgUn228g00040.t1	Tectona grandis	Terpenoid · `TPS`	blast+hmm	High	63.4%	701.9
KAL8554926.1	Phlomoides rotata	Terpenoid · `TPS`	blast+hmm	High	52.1%	701.7
VIAG_c45901_g1_i3_len_2129	Vitex agnus-castus	Terpenoid · `TPS`	blast+hmm	High	56.6%	701.7
scutellaria_barbata_GWHPAOTP022587	Scutellaria barbata	Terpenoid · `TPS`	blast+hmm	High	57.1%	701.6