Callicarpa americana mitochondrial
Biopython GenomeDiagram 1.79; GenBank local location segments.
nad5 · PX121882.1 · 7,579–7,600 bp · −
nad5 · PX121882.1 · 420,410–421,983 bp · −
ccmB · PX121882.1 · 22,789–23,409 bp · −
trnA-UGC · PX121882.1 · 42,266–43,150 bp · −
cox2 · PX121882.1 · 45,916–49,346 bp · −
nad1 · PX121882.1 · 401,472–401,530 bp · −
nad6 · PX121882.1 · 62,410–63,027 bp · −
atp4 · PX121882.1 · 63,979–64,575 bp · −
nad4L · PX121882.1 · 64,749–65,051 bp · −
rps10 · PX121882.1 · 66,715–67,886 bp · −
ccmFN · PX121882.1 · 97,151–98,884 bp · −
trnW-CCA · PX121882.1 · 126,565–126,638 bp · −
nad9 · PX121882.1 · 127,280–127,852 bp · −
nad7 · PX121882.1 · 147,466–152,224 bp · −
trnQ-UUG · PX121882.1 · 156,298–156,369 bp · −
trnG-GCC · PX121882.1 · 159,501–159,572 bp · −
trnM-CAU · PX121882.1 · 164,755–164,827 bp · −
ccmFC · PX121882.1 · 171,149–173,406 bp · −
trnI-CAU · PX121882.1 · 202,034–202,107 bp · −
trnS-UGA · PX121882.1 · 224,398–224,484 bp · −
nad2 · PX121882.1 · 238,899–240,652 bp · −
sdh3 · PX121882.1 · 241,346–241,558 bp · −
trnP-UGG · PX121882.1 · 241,650–241,724 bp · −
trnF-GAA · PX121882.1 · 241,989–242,062 bp · −
trnS-GCU · PX121882.1 · 242,404–242,491 bp · −
trnE-UUC · PX121882.1 · 245,413–245,484 bp · −
atp1 · PX121882.1 · 247,260–248,738 bp · −
rpl2 · PX121882.1 · 271,691–272,671 bp · −
trnfM-CAU · PX121882.1 · 303,348–303,421 bp · −
rrn26 · PX121882.1 · 303,631–307,039 bp · −
trnS-GGA · PX121882.1 · 366,182–366,268 bp · −
trnD-GUC · PX121882.1 · 366,896–366,969 bp · −
cob · PX121882.1 · 382,077–383,282 bp · −
rps14 · PX121882.1 · 385,380–385,682 bp · −
rpl5 · PX121882.1 · 385,684–386,238 bp · −
matR · PX121882.1 · 398,933–400,822 bp · −
mttB · PX121882.1 · 402,165–402,995 bp · −
trnfM-CAU · PX121882.1 · 407,127–407,200 bp · −
rrn26 · PX121882.1 · 407,410–410,818 bp · −
cox1 · PX121882.1 · 454,473–456,056 bp · −
atp1 · PX121882.1 · 456,561–458,054 bp · −
trnL-CAA · PX121882.1 · 494,082–494,156 bp · −
ccmC · PX121882.1 · 494,205–494,900 bp · −
nad5 · PX121882.1 · 348,812–351,107 bp · +
atp6 · PX121882.1 · 13,383–14,162 bp · +
rpl10 · PX121882.1 · 21,999–22,487 bp · +
trnK-UUU · PX121882.1 · 25,622–25,694 bp · +
atp8 · PX121882.1 · 32,305–32,784 bp · +
cox3 · PX121882.1 · 33,374–34,171 bp · +
sdh4 · PX121882.1 · 34,099–34,548 bp · +
nad1 · PX121882.1 · 211,233–211,617 bp · +
nad1 · PX121882.1 · 433,577–435,101 bp · +
nad1 · PX121882.1 · 55,492–55,750 bp · +
nad3 · PX121882.1 · 106,005–106,361 bp · +
rps12 · PX121882.1 · 106,410–106,787 bp · +
rrn18 · PX121882.1 · 140,235–141,927 bp · +
rrn5 · PX121882.1 · 142,100–142,214 bp · +
trnF-GAA · PX121882.1 · 142,271–142,340 bp · +
trnH-GUG · PX121882.1 · 176,974–177,047 bp · +
nad2 · PX121882.1 · 445,040–448,849 bp · +
rps4 · PX121882.1 · 273,913–275,001 bp · +
rps3 · PX121882.1 · 275,509–278,844 bp · +
rpl16 · PX121882.1 · 278,813–279,238 bp · +
atp9 · PX121882.1 · 320,558–320,782 bp · +
nad4 · PX121882.1 · 369,693–378,056 bp · +
rps13 · PX121882.1 · 432,273–432,623 bp · +
trnC-GCA · PX121882.1 · 441,444–441,514 bp · +
trnN-GUU · PX121882.1 · 443,640–443,711 bp · +
trnY-GUA · PX121882.1 · 444,432–444,514 bp · +
0 kb
42 kb
84 kb
126 kb
168 kb
210 kb
252 kb
294 kb
336 kb
378 kb
420 kb
462 kb
Callicarpa americana
ANNOTATED MITOGENOME
PX121882.1
499,565 bp · 63 genes
Gene function
NADH dehydrogenase
ATP synthase
Ribosomal protein
Cytochrome
Transfer RNA
Other
Ribosomal RNA
0 124891 249782 374674 499565 bp
Forward strand 5′ → 3′
atp6 rpl10 trnK-UUU atp8 cox3 sdh4 nad1 nad3 rps12 rrn18 rrn5 trnF-GAA trnH-GUG nad1 rps4 rps3 rpl16 atp9 nad5 nad4 rps13 nad1 trnC-GCA trnN-GUU trnY-GUA nad2
nad5 ccmB trnA-UGC cox2 nad6 atp4 nad4L rps10 ccmFN trnW-CCA nad9 nad7 trnQ-UUG trnG-GCC trnM-CAU ccmFC trnI-CAU trnS-UGA nad2 sdh3 trnP-UGG trnF-GAA trnS-GCU trnE-UUC atp1 rpl2 trnfM-CAU rrn26 trnS-GGA trnD-GUC cob rps14 rpl5 matR nad1 mttB trnfM-CAU rrn26 nad5 cox1 atp1 trnL-CAA ccmC
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. A circular layout does not establish a physical master-circle configuration. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
69 local segments
Gene Type Group Strand Start End Length
nad5 gene − 7579 7600 22 Locate
atp6 gene + 13383 14162 780 Locate
rpl10 gene + 21999 22487 489 Locate
ccmB gene − 22789 23409 621 Locate
trnK-UUU gene + 25622 25694 73 Locate
atp8 gene + 32305 32784 480 Locate
cox3 gene + 33374 34171 798 Locate
sdh4 gene + 34099 34548 450 Locate
trnA-UGC gene − 42266 43150 885 Locate
cox2 gene − 45916 49346 3431 Locate
nad1 gene + 55492 55750 259 Locate
nad6 gene − 62410 63027 618 Locate
atp4 gene − 63979 64575 597 Locate
nad4L gene − 64749 65051 303 Locate
rps10 gene − 66715 67886 1172 Locate
ccmFN gene − 97151 98884 1734 Locate
nad3 gene + 106005 106361 357 Locate
rps12 gene + 106410 106787 378 Locate
trnW-CCA gene − 126565 126638 74 Locate
nad9 gene − 127280 127852 573 Locate
rrn18 gene + 140235 141927 1693 Locate
rrn5 gene + 142100 142214 115 Locate
trnF-GAA gene + 142271 142340 70 Locate
nad7 gene − 147466 152224 4759 Locate
trnQ-UUG gene − 156298 156369 72 Locate
trnG-GCC gene − 159501 159572 72 Locate
trnM-CAU gene − 164755 164827 73 Locate
ccmFC gene − 171149 173406 2258 Locate
trnH-GUG gene + 176974 177047 74 Locate
trnI-CAU gene − 202034 202107 74 Locate
nad1 gene + 211233 211617 385 Locate
trnS-UGA gene − 224398 224484 87 Locate
nad2 gene − 238899 240652 1754 Locate
sdh3 gene − 241346 241558 213 Locate
trnP-UGG gene − 241650 241724 75 Locate
trnF-GAA gene − 241989 242062 74 Locate
trnS-GCU gene − 242404 242491 88 Locate
trnE-UUC gene − 245413 245484 72 Locate
atp1 gene − 247260 248738 1479 Locate
rpl2 gene − 271691 272671 981 Locate
rps4 gene + 273913 275001 1089 Locate
rps3 gene + 275509 278844 3336 Locate
rpl16 gene + 278813 279238 426 Locate
trnfM-CAU gene − 303348 303421 74 Locate
rrn26 gene − 303631 307039 3409 Locate
atp9 gene + 320558 320782 225 Locate
nad5 gene + 348812 351107 2296 Locate
trnS-GGA gene − 366182 366268 87 Locate
trnD-GUC gene − 366896 366969 74 Locate
nad4 gene + 369693 378056 8364 Locate
cob gene − 382077 383282 1206 Locate
rps14 gene − 385380 385682 303 Locate
rpl5 gene − 385684 386238 555 Locate
matR gene − 398933 400822 1890 Locate
nad1 gene − 401472 401530 59 Locate
mttB gene − 402165 402995 831 Locate
trnfM-CAU gene − 407127 407200 74 Locate
rrn26 gene − 407410 410818 3409 Locate
nad5 gene − 420410 421983 1574 Locate
rps13 gene + 432273 432623 351 Locate
nad1 gene + 433577 435101 1525 Locate
trnC-GCA gene + 441444 441514 71 Locate
trnN-GUU gene + 443640 443711 72 Locate
trnY-GUA gene + 444432 444514 83 Locate
nad2 gene + 445040 448849 3810 Locate
cox1 gene − 454473 456056 1584 Locate
atp1 gene − 456561 458054 1494 Locate
trnL-CAA gene − 494082 494156 75 Locate
ccmC gene − 494205 494900 696 Locate
Status Available
Accession PX121882.1
Length 499,565 bp
GC content 45.3%
Annotated genes 63
Gene sequence records 9
Nad Dehydrogenase 15 Atp Synthase 6 Ribosomal Protein 10 Cytochrome 8 Translation Rna 22 Other 4 Ribosomal Rna 4
SSR 0
Direct 0
Inverted 0
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources