Species pathway expression context

Ocimum basilicum

Candidate-to-expression mappings are displayed independently from candidate functional evidence.

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Matrix file
Ocimum_basilicum.gene_tpm_log1p.tsv
Samples
10
Matrix genes
65,635
Expressed genes
59,568
Mapped candidate rows
0
Measured / ND
0 / 0
Row z-score−2.50+2.5
ND · Not detected
Unmapped candidate ID
CandidateCardinal_flower-1Cardinal_flower-2Cardinal_flower-3Cardinal_leaf-1Cardinal_leaf-2Cardinal_leaf-3Sweet_basil_flowerSweet_basil_leafSweet_basil_rootSweet_basil_stem
360850.g1.t1Alkaloid · SGD
372.g166.t1Alkaloid · SGD
372.g166.t1.1.5db15257Alkaloid · SGD
375542.g3.t1Alkaloid · SGD
379.g39.t1Alkaloid · SGD
379980.g4.t1Alkaloid · SGD
379980.g4.t1.1.5db15290Alkaloid · SGD
380070.g1.t1Alkaloid · SGD
380446.g2.t1Alkaloid · SGD
381982.g9.t1Alkaloid · SGD
382790.g64.t1Alkaloid · SGD
382790.g64.t1.1.5db15303Alkaloid · SGD
383332.g79.t1Alkaloid · SGD
384052.g62.t1Alkaloid · SGD
384052.g62.t1.1.5db15369Alkaloid · SGD
384315.g73.t1Alkaloid · SGD
385214.g152.t1Alkaloid · SGD
385214.g152.t1.1.5db153caAlkaloid · SGD
385708.g43.t1Alkaloid · SGD
385803.g60.t1Alkaloid · SGD
451.g117.t1Alkaloid · SGD
451.g117.t1.1.5db1542aAlkaloid · SGD
451.g117.t1.2.5db1542aAlkaloid · SGD
487.g49.t1.1.5db1544bAlkaloid · SGD
541.g31.t1Alkaloid · SGD
547.g231.t1Alkaloid · SGD
548428.g2.t1Alkaloid · SGD
548429.g2.t1Alkaloid · SGD
648.g65.t1Alkaloid · SGD
651.g16.t1Alkaloid · SGD
696.g63.t1Alkaloid · SGD
726.g122.t1Alkaloid · SGD
741.g68.t1Alkaloid · SGD
748.g138.t1Alkaloid · SGD
748.g138.t1.1.5db1552aAlkaloid · SGD
897.g84.t1Alkaloid · SGD
1717.g12.t1Alkaloid · SLS
335043.g2.t1Alkaloid · SLS
383508.g9.t1Alkaloid · SLS
385430.g2.t1Alkaloid · SLS
385488.g26.t1Alkaloid · SLS
385488.g27.t1Alkaloid · SLS
484.g72.t1Alkaloid · SLS
484.g72.t1.1.5db15443Alkaloid · SLS
484.g76.t1Alkaloid · SLS
566.g49.t1Alkaloid · SLS
566.g49.t1.1.5db154c4Alkaloid · SLS
685.g39.t1Alkaloid · SLS
685.g39.t1.1.5db154e7Alkaloid · SLS
1023.g135.t1Alkaloid · STR

Quantitative legend: measured cells use a diverging row z-score scale with a meaningful centre at zero. Raw values remain available in cell inspectors.

Mapping boundary: Species-level transcriptome matrix summaries are shown independently. Candidate IDs are not joined to expression IDs because annotation versions do not map directly.