Species pathway expression context

Ocimum basilicum

Candidate-to-expression mappings are displayed independently from candidate functional evidence.

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Matrix file
Ocimum_basilicum.gene_tpm_log1p.tsv
Samples
10
Matrix genes
65,635
Expressed genes
59,568
Mapped candidate rows
0
Measured / ND
0 / 0
Row z-score−2.50+2.5
ND · Not detected
Unmapped candidate ID
CandidateCardinal_flower-1Cardinal_flower-2Cardinal_flower-3Cardinal_leaf-1Cardinal_leaf-2Cardinal_leaf-3Sweet_basil_flowerSweet_basil_leafSweet_basil_rootSweet_basil_stem
382790.g17.t1Alkaloid · PYKS
382873.g2.t1Alkaloid · PYKS
382992.g90.t1Alkaloid · PYKS
383121.g14.t1Alkaloid · PYKS
383565.g4.t1Alkaloid · PYKS
383684.g33.t1Alkaloid · PYKS
383706.g22.t1Alkaloid · PYKS
383788.g132.t1Alkaloid · PYKS
384222.g87.t1Alkaloid · PYKS
384573.g2.t1Alkaloid · PYKS
384886.g6.t1Alkaloid · PYKS
385172.g5.t1Alkaloid · PYKS
385524.g44.t1Alkaloid · PYKS
385708.g14.t1Alkaloid · PYKS
394542.g2.t1Alkaloid · PYKS
394587.g2.t1Alkaloid · PYKS
423932.g1.t1Alkaloid · PYKS
423933.g1.t1Alkaloid · PYKS
452.g85.t1Alkaloid · PYKS
454.g110.t1Alkaloid · PYKS
486.g66.t1Alkaloid · PYKS
506.g16.t1Alkaloid · PYKS
506.g7.t1Alkaloid · PYKS
541080.g1.t1Alkaloid · PYKS
541080.g2.t1Alkaloid · PYKS
541083.g1.t1Alkaloid · PYKS
541083.g2.t1_541083.g3.t1Alkaloid · PYKS
549.g252.t1Alkaloid · PYKS
553012.g3.t1Alkaloid · PYKS
553013.g2.t1Alkaloid · PYKS
666.g13.t1Alkaloid · PYKS
712.g96.t1Alkaloid · PYKS
715.g29.t1Alkaloid · PYKS
731.g33.t1Alkaloid · PYKS
752.g165.t1Alkaloid · PYKS
973.g23.t1Alkaloid · PYKS
1188.g21.t1Alkaloid · SGD
1380.g4.t1Alkaloid · SGD
1664.g11.t1Alkaloid · SGD
1725.g39.t1Alkaloid · SGD
1725.g39.t1.1.5db151a4Alkaloid · SGD
1734.g3.t1Alkaloid · SGD
1734.g3.t1.1.5db1519eAlkaloid · SGD
1852.g9.t1Alkaloid · SGD
1926.g59.t1Alkaloid · SGD
1949.g34.t1Alkaloid · SGD
1949.g34.t1.1.5db151e3Alkaloid · SGD
1983.g72.t1Alkaloid · SGD
336546.g1.t1Alkaloid · SGD
336546.g1.t1.1.5db1521dAlkaloid · SGD

Quantitative legend: measured cells use a diverging row z-score scale with a meaningful centre at zero. Raw values remain available in cell inspectors.

Mapping boundary: Species-level transcriptome matrix summaries are shown independently. Candidate IDs are not joined to expression IDs because annotation versions do not map directly.