Species pathway expression context

Ocimum basilicum

Candidate-to-expression mappings are displayed independently from candidate functional evidence.

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Matrix file
Ocimum_basilicum.gene_tpm_log1p.tsv
Samples
10
Matrix genes
65,635
Expressed genes
59,568
Mapped candidate rows
0
Measured / ND
0 / 0
Row z-score−2.50+2.5
ND · Not detected
Unmapped candidate ID
CandidateCardinal_flower-1Cardinal_flower-2Cardinal_flower-3Cardinal_leaf-1Cardinal_leaf-2Cardinal_leaf-3Sweet_basil_flowerSweet_basil_leafSweet_basil_rootSweet_basil_stem
716.g86.t1Flavonoid · F3H_CYP75B
716.g86.t1.1.5db15507Flavonoid · F3H_CYP75B
789.g31.t1Flavonoid · F3H_CYP75B
789.g9.t1Flavonoid · F3H_CYP75B
799.g2.t1Flavonoid · F3H_CYP75B
799.g8.t1_799.g9.t1Flavonoid · F3H_CYP75B
801.g5.t1Flavonoid · F3H_CYP75B
897.g63.t1Flavonoid · F3H_CYP75B
923.g12.t1Flavonoid · F3H_CYP75B
1432.g15.t1Flavonoid · FNS
1782.g4.t1Flavonoid · FNS
381657.g1.t1Flavonoid · FNS
384119.g132.t1Flavonoid · FNS
384596.g54.t1Flavonoid · FNS
385365.g64.t1Flavonoid · FNS
719.g48.t1Flavonoid · FNS
730.g11.t1Flavonoid · FNS
935.g139.t1Flavonoid · FNS
1275.g13.t1Flavonoid · IFR
1630.g76.t1Flavonoid · IFR
1681.g30.t1Flavonoid · IFR
1879.g124.t1Flavonoid · IFR
1892.g58.t1Flavonoid · IFR
360893.g1.t1Flavonoid · IFR
360893.g1.t1.1.5db15234Flavonoid · IFR
377672.g7.t1Flavonoid · IFR
379553.g18.t1Flavonoid · IFR
381425.g31.t1Flavonoid · IFR
381425.g32.t1Flavonoid · IFR
382790.g11.t1Flavonoid · IFR
383365.g23.t1Flavonoid · IFR
384097.g109.t1Flavonoid · IFR
384192.g40.t1Flavonoid · IFR
384192.g41.t1Flavonoid · IFR
384192.g45.t1Flavonoid · IFR
384288.g6.t1Flavonoid · IFR
384910.g8.t1Flavonoid · IFR
385763.g51.t1Flavonoid · IFR
385803.g39.t1Flavonoid · IFR
401835.g1.t1Flavonoid · IFR
402816.g1.t1Flavonoid · IFR
402816.g2.t1Flavonoid · IFR
402817.g1.t1Flavonoid · IFR
453.g172.t1Flavonoid · IFR
546.g10.t1Flavonoid · IFR
556.g134.t1Flavonoid · IFR
668.g100.t1Flavonoid · IFR
668.g96.t1Flavonoid · IFR
712.g93.t1Flavonoid · IFR
740.g29.t1Flavonoid · IFR

Quantitative legend: measured cells use a diverging row z-score scale with a meaningful centre at zero. Raw values remain available in cell inspectors.

Mapping boundary: Species-level transcriptome matrix summaries are shown independently. Candidate IDs are not joined to expression IDs because annotation versions do not map directly.