Species pathway expression context

Ocimum basilicum

Candidate-to-expression mappings are displayed independently from candidate functional evidence.

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Matrix file
Ocimum_basilicum.gene_tpm_log1p.tsv
Samples
10
Matrix genes
65,635
Expressed genes
59,568
Mapped candidate rows
0
Measured / ND
0 / 0
Row z-score−2.50+2.5
ND · Not detected
Unmapped candidate ID
CandidateCardinal_flower-1Cardinal_flower-2Cardinal_flower-3Cardinal_leaf-1Cardinal_leaf-2Cardinal_leaf-3Sweet_basil_flowerSweet_basil_leafSweet_basil_rootSweet_basil_stem
805.g74.t1Flavonoid · IFR
1377.g34.t1Flavonoid · PAL
1533.g24.t1Flavonoid · PAL
1533.g25.t1_1533.g26.t1Flavonoid · PAL
1533.g37.t1Flavonoid · PAL
1533.g42.t1Flavonoid · PAL
1534.g5.t1Flavonoid · PAL
378046.g15.t1.1.5db15278Flavonoid · PAL
381677.g70.t1Flavonoid · PAL
382626.g53.t1_382626.g56.t1Flavonoid · PAL
383331.g115.t1Flavonoid · PAL
384144.g1.t1Flavonoid · PAL
384144.g3.t1Flavonoid · PAL
447.g89.t1Flavonoid · PAL
504.g148.t1Flavonoid · PAL
699.g65.t1Flavonoid · PAL
752.g136.t1Flavonoid · PAL
1242.g15.t1Flavonoid · UFGT
1295.g16.t1Flavonoid · UFGT
1574.g19.t1Flavonoid · UFGT
1869.g38.t1Flavonoid · UFGT
374700.g3.t1Flavonoid · UFGT
374700.g3.t1.1.5db1525bFlavonoid · UFGT
374874.g8.t1Flavonoid · UFGT
376563.g6.t1Flavonoid · UFGT
377526.g1.t1Flavonoid · UFGT
380063.g3.t1Flavonoid · UFGT
380484.g7.t1Flavonoid · UFGT
380484.g7.t1.1.5db152a0Flavonoid · UFGT
380484.g7.t1.2.5db152a0Flavonoid · UFGT
380484.g7.t1.3.5db152a0Flavonoid · UFGT
381692.g44.t1Flavonoid · UFGT
382097.g1.t1Flavonoid · UFGT
382181.g19.t1Flavonoid · UFGT
382181.g80.t1Flavonoid · UFGT
382239.g54.t1Flavonoid · UFGT
382614.g48.t1Flavonoid · UFGT
382614.g49.t1Flavonoid · UFGT
382860.g4.t1Flavonoid · UFGT
383013.g7.t1Flavonoid · UFGT
383292.g31.t1Flavonoid · UFGT
383373.g16.t1Flavonoid · UFGT
383539.g50.t1Flavonoid · UFGT
384911.g23.t1Flavonoid · UFGT
384911.g23.t1.1.5db153a5Flavonoid · UFGT
384917.g19.t1Flavonoid · UFGT
385428.g48.t1Flavonoid · UFGT
385428.g48.t1.1.5db153e0Flavonoid · UFGT
448.g76.t1Flavonoid · UFGT
517.g78.t1Flavonoid · UFGT

Quantitative legend: measured cells use a diverging row z-score scale with a meaningful centre at zero. Raw values remain available in cell inspectors.

Mapping boundary: Species-level transcriptome matrix summaries are shown independently. Candidate IDs are not joined to expression IDs because annotation versions do not map directly.