Species pathway expression context

Ocimum basilicum

Candidate-to-expression mappings are displayed independently from candidate functional evidence.

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Matrix file
Ocimum_basilicum.gene_tpm_log1p.tsv
Samples
10
Matrix genes
65,635
Expressed genes
59,568
Mapped candidate rows
0
Measured / ND
0 / 0
Row z-score−2.50+2.5
ND · Not detected
Unmapped candidate ID
CandidateCardinal_flower-1Cardinal_flower-2Cardinal_flower-3Cardinal_leaf-1Cardinal_leaf-2Cardinal_leaf-3Sweet_basil_flowerSweet_basil_leafSweet_basil_rootSweet_basil_stem
385370.g8.t1Phenylpropanoid · CCR
386112.g6.t1Phenylpropanoid · CCR
455.g221.t1Phenylpropanoid · CCR
515.g98.t1Phenylpropanoid · CCR
539.g138.t1Phenylpropanoid · CCR
547.g322.t1Phenylpropanoid · CCR
549.g336.t1Phenylpropanoid · CCR
553.g13.t1Phenylpropanoid · CCR
661.g55.t1Phenylpropanoid · CCR
690.g164.t1Phenylpropanoid · CCR
716.g93.t1Phenylpropanoid · CCR
716.g93.t1.1.5db15508Phenylpropanoid · CCR
751.g20.t1Phenylpropanoid · CCR
1218.g2.t1Phenylpropanoid · CCoAOMT
1385.g6.t1Phenylpropanoid · CCoAOMT
1385.g6.t1.1.5db15173Phenylpropanoid · CCoAOMT
1701.g203.t1Phenylpropanoid · CCoAOMT
1782.g20.t1Phenylpropanoid · CCoAOMT
1949.g146.t1Phenylpropanoid · CCoAOMT
1964.g106.t1Phenylpropanoid · CCoAOMT
368477.g2.t1Phenylpropanoid · CCoAOMT
371778.g1.t1Phenylpropanoid · CCoAOMT
371778.g1.t1.1.5db1524cPhenylpropanoid · CCoAOMT
376787.g1.t1Phenylpropanoid · CCoAOMT
376787.g1.t1.1.5db1526bPhenylpropanoid · CCoAOMT
376787.g1.t1.2.5db1526bPhenylpropanoid · CCoAOMT
376787.g1.t1.3.5db1526bPhenylpropanoid · CCoAOMT
376787.g2.t1Phenylpropanoid · CCoAOMT
378207.g5.t1Phenylpropanoid · CCoAOMT
380861.g19.t1Phenylpropanoid · CCoAOMT
380861.g19.t1.1.5db152a7Phenylpropanoid · CCoAOMT
381602.g3.t1Phenylpropanoid · CCoAOMT
381602.g3.t1.1.5db152bbPhenylpropanoid · CCoAOMT
381679.g26.t1Phenylpropanoid · CCoAOMT
382699.g38.t1Phenylpropanoid · CCoAOMT
382699.g40.t1Phenylpropanoid · CCoAOMT
382699.g43.t1Phenylpropanoid · CCoAOMT
382699.g46.t1Phenylpropanoid · CCoAOMT
382699.g48.t1Phenylpropanoid · CCoAOMT
382699.g51.t1Phenylpropanoid · CCoAOMT
382790.g97.t1Phenylpropanoid · CCoAOMT
383254.g31.t1Phenylpropanoid · CCoAOMT
383458.g101.t1Phenylpropanoid · CCoAOMT
383458.g102.t1Phenylpropanoid · CCoAOMT
383458.g104.t1Phenylpropanoid · CCoAOMT
383458.g106.t1Phenylpropanoid · CCoAOMT
383458.g107.t1Phenylpropanoid · CCoAOMT
383458.g98.t1Phenylpropanoid · CCoAOMT
384119.g106.t1Phenylpropanoid · CCoAOMT
385214.g124.t1Phenylpropanoid · CCoAOMT

Quantitative legend: measured cells use a diverging row z-score scale with a meaningful centre at zero. Raw values remain available in cell inspectors.

Mapping boundary: Species-level transcriptome matrix summaries are shown independently. Candidate IDs are not joined to expression IDs because annotation versions do not map directly.