Species pathway expression context

Ocimum basilicum

Candidate-to-expression mappings are displayed independently from candidate functional evidence.

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Matrix file
Ocimum_basilicum.gene_tpm_log1p.tsv
Samples
10
Matrix genes
65,635
Expressed genes
59,568
Mapped candidate rows
0
Measured / ND
0 / 0
Row z-score−2.50+2.5
ND · Not detected
Unmapped candidate ID
CandidateCardinal_flower-1Cardinal_flower-2Cardinal_flower-3Cardinal_leaf-1Cardinal_leaf-2Cardinal_leaf-3Sweet_basil_flowerSweet_basil_leafSweet_basil_rootSweet_basil_stem
548.g31.t1Phenylpropanoid · CAD
558.g261.t1Phenylpropanoid · CAD
558.g263.t1Phenylpropanoid · CAD
558.g64.t1Phenylpropanoid · CAD
560.g8.t1Phenylpropanoid · CAD
560.g9.t1Phenylpropanoid · CAD
565.g55.t1Phenylpropanoid · CAD
565.g57.t1Phenylpropanoid · CAD
565.g59.t1Phenylpropanoid · CAD
741.g124.t1Phenylpropanoid · CAD
973.g50.t1Phenylpropanoid · CAD
993.g1.t1Phenylpropanoid · CAD
993.g6.t1Phenylpropanoid · CAD
1721.g23.t1Phenylpropanoid · CCR
1721.g23.t1.1.5db1519ePhenylpropanoid · CCR
1879.g83.t1_1879.g84.t1Phenylpropanoid · CCR
1884.g57.t1Phenylpropanoid · CCR
1900.g5.t1Phenylpropanoid · CCR
1980.g69.t1_1980.g70.t1Phenylpropanoid · CCR
308.g174.t1Phenylpropanoid · CCR
308.g174.t1.1.5db15220Phenylpropanoid · CCR
362083.g2.t1Phenylpropanoid · CCR
373633.g4.t1.1.5db15255Phenylpropanoid · CCR
378574.g3.t1Phenylpropanoid · CCR
380023.g5.t1Phenylpropanoid · CCR
382151.g18.t1Phenylpropanoid · CCR
382527.g6.t1Phenylpropanoid · CCR
382772.g40.t1Phenylpropanoid · CCR
382847.g33.t1Phenylpropanoid · CCR
382847.g33.t1.1.5db15305Phenylpropanoid · CCR
382992.g45.t1Phenylpropanoid · CCR
383230.g46.t1Phenylpropanoid · CCR
383637.g25.t1Phenylpropanoid · CCR
383639.g87.t1Phenylpropanoid · CCR
383783.g10.t1Phenylpropanoid · CCR
383783.g12.t1Phenylpropanoid · CCR
383783.g12.t1.1.5db1534dPhenylpropanoid · CCR
383783.g13.t1Phenylpropanoid · CCR
383864.g22.t1Phenylpropanoid · CCR
383960.g14.t1Phenylpropanoid · CCR
384239.g20.t1Phenylpropanoid · CCR
384885.g3.t1Phenylpropanoid · CCR
384885.g3.t1.1.5db153a1Phenylpropanoid · CCR
385105.g3.t1Phenylpropanoid · CCR
385244.g6.t1Phenylpropanoid · CCR
385244.g6.t1.1.5db153c9Phenylpropanoid · CCR
385244.g9.t1Phenylpropanoid · CCR
385346.g91.t1Phenylpropanoid · CCR
385346.g91.t1.1.5db153dbPhenylpropanoid · CCR
385346.g91.t1.2.5db153dbPhenylpropanoid · CCR

Quantitative legend: measured cells use a diverging row z-score scale with a meaningful centre at zero. Raw values remain available in cell inspectors.

Mapping boundary: Species-level transcriptome matrix summaries are shown independently. Candidate IDs are not joined to expression IDs because annotation versions do not map directly.