Species pathway expression context

Ocimum basilicum

Candidate-to-expression mappings are displayed independently from candidate functional evidence.

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Matrix file
Ocimum_basilicum.gene_tpm_log1p.tsv
Samples
10
Matrix genes
65,635
Expressed genes
59,568
Mapped candidate rows
0
Measured / ND
0 / 0
Row z-score−2.50+2.5
ND · Not detected
Unmapped candidate ID
CandidateCardinal_flower-1Cardinal_flower-2Cardinal_flower-3Cardinal_leaf-1Cardinal_leaf-2Cardinal_leaf-3Sweet_basil_flowerSweet_basil_leafSweet_basil_rootSweet_basil_stem
226198.g1.t1Alkaloid · COR
353885.g6.t1Alkaloid · COR
367881.g1.t1Alkaloid · COR
367881.g2.t1Alkaloid · COR
370115.g5.t1Alkaloid · COR
371648.g2.t1Alkaloid · COR
382957.g97.t1Alkaloid · COR
382985.g32.t1Alkaloid · COR
383573.g48.t1Alkaloid · COR
383684.g9.t1Alkaloid · COR
384260.g70.t1Alkaloid · COR
384387.g31.t1Alkaloid · COR
384387.g31.t1.1.5db15386Alkaloid · COR
384691.g32.t1Alkaloid · COR
384770.g4.t1Alkaloid · COR
385365.g35.t1Alkaloid · COR
385365.g37.t1Alkaloid · COR
385365.g38.t1Alkaloid · COR
385365.g39.t1Alkaloid · COR
385365.g49.t1Alkaloid · COR
385365.g51.t1Alkaloid · COR
385370.g21.t1Alkaloid · COR
385524.g35.t1Alkaloid · COR
385717.g9.t1Alkaloid · COR
448.g109.t1Alkaloid · COR
544.g68.t1Alkaloid · COR
551841.g5.t1Alkaloid · COR
551842.g5.t1Alkaloid · COR
561.g28.t1Alkaloid · COR
711.g69.t1Alkaloid · COR
737.g75.t1Alkaloid · COR
737.g75.t1.1.5db1551aAlkaloid · COR
771.g27.t1Alkaloid · COR
871.g25.t1Alkaloid · COR
935.g111.t1Alkaloid · COR
935.g112.t1Alkaloid · COR
935.g113.t1Alkaloid · COR
935.g127.t1Alkaloid · COR
935.g130.t1Alkaloid · COR
1663.g9.t1Alkaloid · CYP719
1663.g9.t1.1.5db15196Alkaloid · CYP719
1663.g9.t1.2.5db15196Alkaloid · CYP719
1663.g9.t1.3.5db15196Alkaloid · CYP719
1926.g39.t1Alkaloid · CYP719
376.g60.t1Alkaloid · CYP719
383112.g9.t1Alkaloid · CYP719
384932.g72.t1Alkaloid · CYP719
384932.g72.t1.1.5db153aaAlkaloid · CYP719
385938.g150.t1Alkaloid · CYP719
409277.g1.t1Alkaloid · CYP719

Quantitative legend: measured cells use a diverging row z-score scale with a meaningful centre at zero. Raw values remain available in cell inspectors.

Mapping boundary: Species-level transcriptome matrix summaries are shown independently. Candidate IDs are not joined to expression IDs because annotation versions do not map directly.