Species pathway expression context

Ocimum basilicum

Candidate-to-expression mappings are displayed independently from candidate functional evidence.

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Matrix file
Ocimum_basilicum.gene_tpm_log1p.tsv
Samples
10
Matrix genes
65,635
Expressed genes
59,568
Mapped candidate rows
0
Measured / ND
0 / 0
Row z-score−2.50+2.5
ND · Not detected
Unmapped candidate ID
CandidateCardinal_flower-1Cardinal_flower-2Cardinal_flower-3Cardinal_leaf-1Cardinal_leaf-2Cardinal_leaf-3Sweet_basil_flowerSweet_basil_leafSweet_basil_rootSweet_basil_stem
385490.g12.t1Alkaloid · GES
386072.g46.t1Alkaloid · GES
386072.g51.t1Alkaloid · GES
386135.g4.t1Alkaloid · GES
386161.g58.t1Alkaloid · GES
449.g75.t1Alkaloid · GES
520.g183.t1.1.5db1547cAlkaloid · GES
520.g188.t1Alkaloid · GES
539426.g1.t1Alkaloid · GES
539427.g1.t1Alkaloid · GES
539432.g5.t1Alkaloid · GES
539443.g5.t1Alkaloid · GES
558.g261.t1Alkaloid · GES
558.g263.t1Alkaloid · GES
558.g64.t1Alkaloid · GES
565.g59.t1Alkaloid · GES
722.g135.t1Alkaloid · GES
741.g124.t1Alkaloid · GES
973.g50.t1Alkaloid · GES
1050.g32.t1Alkaloid · GS
1050.g33.t1Alkaloid · GS
1050.g36.t1Alkaloid · GS
1359.g21.t1Alkaloid · GS
1503.g10.t1Alkaloid · GS
308.g15.t1Alkaloid · GS
348204.g1.t1Alkaloid · GS
355163.g2.t1Alkaloid · GS
365528.g1.t1Alkaloid · GS
373918.g10.t1Alkaloid · GS
373918.g9.t1Alkaloid · GS
374.g44.t1Alkaloid · GS
374.g45.t1Alkaloid · GS
381014.g13.t1Alkaloid · GS
381014.g14.t1Alkaloid · GS
381014.g14.t1.1.5db152aaAlkaloid · GS
381014.g15.t1Alkaloid · GS
381291.g3.t1Alkaloid · GS
383079.g13.t1Alkaloid · GS
383254.g58.t1Alkaloid · GS
383503.g51.t1Alkaloid · GS
384095.g85.t1Alkaloid · GS
384095.g85.t1.1.5db15374Alkaloid · GS
384923.g12.t1Alkaloid · GS
384923.g12.t1.1.5db153a7Alkaloid · GS
384923.g13.t1Alkaloid · GS
384923.g14.t1Alkaloid · GS
384923.g16.t1Alkaloid · GS
384923.g18.t1Alkaloid · GS
384923.g19.t1Alkaloid · GS
384923.g20.t1Alkaloid · GS

Quantitative legend: measured cells use a diverging row z-score scale with a meaningful centre at zero. Raw values remain available in cell inspectors.

Mapping boundary: Species-level transcriptome matrix summaries are shown independently. Candidate IDs are not joined to expression IDs because annotation versions do not map directly.