Species pathway expression context

Ocimum basilicum

Candidate-to-expression mappings are displayed independently from candidate functional evidence.

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Matrix file
Ocimum_basilicum.gene_tpm_log1p.tsv
Samples
10
Matrix genes
65,635
Expressed genes
59,568
Mapped candidate rows
0
Measured / ND
0 / 0
Row z-score−2.50+2.5
ND · Not detected
Unmapped candidate ID
CandidateCardinal_flower-1Cardinal_flower-2Cardinal_flower-3Cardinal_leaf-1Cardinal_leaf-2Cardinal_leaf-3Sweet_basil_flowerSweet_basil_leafSweet_basil_rootSweet_basil_stem
384923.g22.t1Alkaloid · GS
385022.g17.t1Alkaloid · GS
385149.g9.t1Alkaloid · GS
385149.g9.t1.1.5db153baAlkaloid · GS
385612.g51.t1Alkaloid · GS
555.g76.t1Alkaloid · GS
570345.g2.t1Alkaloid · GS
570346.g2.t1Alkaloid · GS
714.g9.t1Alkaloid · GS
754.g16.t1Alkaloid · GS
1897.g54.t1Alkaloid · ISY
1968.g176.t1Alkaloid · ISY
1968.g179.t1Alkaloid · ISY
379.g156.t1Alkaloid · ISY
383068.g59.t1Alkaloid · ISY
384868.g97.t1Alkaloid · ISY
565.g15.t1Alkaloid · ISY
757.g357.t1Alkaloid · ISY
375947.g1.t1Alkaloid · LAMT
382674.g3.t1Alkaloid · LAMT
560.g27.t1Alkaloid · LAMT
560.g32.t1Alkaloid · LAMT
ocimum_basilicum_1180.g40.t1Alkaloid · LAMT
ocimum_basilicum_1670.g2.t1Alkaloid · LAMT
ocimum_basilicum_1886.g131.t1Alkaloid · LAMT
ocimum_basilicum_1913.g78.t1Alkaloid · LAMT
ocimum_basilicum_1913.g87.t1Alkaloid · LAMT
ocimum_basilicum_1952.g28.t1Alkaloid · LAMT
ocimum_basilicum_359780.g1.t1Alkaloid · LAMT
ocimum_basilicum_359840.g1.t1Alkaloid · LAMT
ocimum_basilicum_368557.g1.t1Alkaloid · LAMT
ocimum_basilicum_382674.g3.t1Alkaloid · LAMT
ocimum_basilicum_382674.g4.t1Alkaloid · LAMT
ocimum_basilicum_383214.g81.t1Alkaloid · LAMT
ocimum_basilicum_383214.g83.t1Alkaloid · LAMT
ocimum_basilicum_383637.g60.t1Alkaloid · LAMT
ocimum_basilicum_385488.g47.t1Alkaloid · LAMT
ocimum_basilicum_385620.g26.t1Alkaloid · LAMT
ocimum_basilicum_385620.g27.t1Alkaloid · LAMT
ocimum_basilicum_385620.g28.t1Alkaloid · LAMT
ocimum_basilicum_385620.g30.t1Alkaloid · LAMT
ocimum_basilicum_400504.g3.t1Alkaloid · LAMT
ocimum_basilicum_400505.g3.t1Alkaloid · LAMT
ocimum_basilicum_435324.g1.t1Alkaloid · LAMT
ocimum_basilicum_435324.g3.t1Alkaloid · LAMT
ocimum_basilicum_435325.g1.t1Alkaloid · LAMT
ocimum_basilicum_435325.g3.t1Alkaloid · LAMT
ocimum_basilicum_560.g32.t1Alkaloid · LAMT
ocimum_basilicum_560.g33.t1Alkaloid · LAMT
ocimum_basilicum_560.g35.t1Alkaloid · LAMT

Quantitative legend: measured cells use a diverging row z-score scale with a meaningful centre at zero. Raw values remain available in cell inspectors.

Mapping boundary: Species-level transcriptome matrix summaries are shown independently. Candidate IDs are not joined to expression IDs because annotation versions do not map directly.