Species pathway expression context

Ocimum basilicum

Candidate-to-expression mappings are displayed independently from candidate functional evidence.

Reset
Matrix file
Ocimum_basilicum.gene_tpm_log1p.tsv
Samples
10
Matrix genes
65,635
Expressed genes
59,568
Mapped candidate rows
0
Measured / ND
0 / 0
Row z-score−2.50+2.5
ND · Not detected
Unmapped candidate ID
CandidateCardinal_flower-1Cardinal_flower-2Cardinal_flower-3Cardinal_leaf-1Cardinal_leaf-2Cardinal_leaf-3Sweet_basil_flowerSweet_basil_leafSweet_basil_rootSweet_basil_stem
ocimum_basilicum_560.g36.t1Alkaloid · LAMT
ocimum_basilicum_560.g44.t1Alkaloid · LAMT
ocimum_basilicum_657.g21.t1Alkaloid · LAMT
ocimum_basilicum_657.g22.t1Alkaloid · LAMT
1609.g55.t1Alkaloid · MPO
368867.g1.t1Alkaloid · MPO
368867.g2.t1Alkaloid · MPO
368867.g3.t1Alkaloid · MPO
373898.g1.t1Alkaloid · MPO
373898.g2.t1Alkaloid · MPO
377482.g2.t1Alkaloid · MPO
378963.g1.t1.1.5db15283Alkaloid · MPO
380021.g2.t1Alkaloid · MPO
380021.g2.t1.1.5db15290Alkaloid · MPO
382380.g13.t1Alkaloid · MPO
384047.g8.t1Alkaloid · MPO
384464.g134.t1Alkaloid · MPO
385027.g4.t1Alkaloid · MPO
385027.g5.t1Alkaloid · MPO
386050.g8.t1Alkaloid · MPO
516.g75.t1Alkaloid · MPO
557.g104.t1Alkaloid · MPO
564.g105.t1Alkaloid · MPO
564.g115.t1Alkaloid · MPO
564.g120.t1Alkaloid · MPO
652.g22.t1Alkaloid · MPO
749.g11.t1Alkaloid · MPO
755.g20.t1Alkaloid · MPO
1587.g57.t1Alkaloid · NCS
1625.g31.t1Alkaloid · NCS
1625.g32.t1Alkaloid · NCS
1630.g13.t1Alkaloid · NCS
1808.g35.t1Alkaloid · NCS
1847.g3.t1Alkaloid · NCS
1954.g7.t1Alkaloid · NCS
1972.g257.t1Alkaloid · NCS
302874.g1.t1Alkaloid · NCS
364696.g1.t1Alkaloid · NCS
364711.g1.t1Alkaloid · NCS
382198.g21.t1Alkaloid · NCS
382527.g34.t1Alkaloid · NCS
382527.g38.t1Alkaloid · NCS
382527.g39.t1Alkaloid · NCS
382538.g29.t1Alkaloid · NCS
382538.g60.t1Alkaloid · NCS
382772.g64.t1Alkaloid · NCS
382992.g102.t1Alkaloid · NCS
382992.g62.t1Alkaloid · NCS
383134.g8.t1Alkaloid · NCS
383254.g61.t1Alkaloid · NCS

Quantitative legend: measured cells use a diverging row z-score scale with a meaningful centre at zero. Raw values remain available in cell inspectors.

Mapping boundary: Species-level transcriptome matrix summaries are shown independently. Candidate IDs are not joined to expression IDs because annotation versions do not map directly.