Species pathway expression context

Salvia miltiorrhiza

Candidate-to-expression mappings are displayed independently from candidate functional evidence.

Reset
Matrix file
Salvia_miltiorrhiza.gene_tpm_log1p.tsv
Samples
12
Matrix genes
18,549
Expressed genes
18,334
Mapped candidate rows
68
Measured / ND
38 / 30
Partial quantitative coverage

Measured and ND rows coexist. ND cells use a separate hatch pattern and remain outside the continuous legend.

Row z-score−2.50+2.5
ND · Not detected
Unmapped candidate ID
Candidateflower-1flower-2flower-3leaf-1leaf-2leaf-3root-1root-2root-3stem-1stem-2stem-3
Smil03G0033600.1.v1.484Alkaloid · STR
Smil04G0022870.1.v1.484Alkaloid · STR
Smil04G0022880.1.v1.484Alkaloid · STR
Smil05G0011540.1.v1.484Alkaloid · STR
Smil05G0013030.1.v1.484Alkaloid · STR
Smil05G0023160.1.v1.484Alkaloid · STR
Smil05G0024780.1.v1.484Alkaloid · STR
Smil05G0027700.1.v1.484Alkaloid · STR
Smil06G0005200.1.v1.484Alkaloid · STR
Smil06G0011400.1.v1.484Alkaloid · STR
Smil06G0011970.1.v1.484Alkaloid · STR
Smil06G0020660.1.v1.484Alkaloid · STR
Smil06G0024720.1.v1.484Alkaloid · STR
Smil06G0025310.1.v1.484Alkaloid · STR
Smil06G0026230.1.v1.484Alkaloid · STR
Smil06G0026250.1.v1.484Alkaloid · STR
Smil06G0026290.1.v1.484Alkaloid · STR
Smil06G0026300.1.v1.484Alkaloid · STR
Smil07G0007430.1.v1.484Alkaloid · STR
Smil07G0021110.1.v1.484Alkaloid · STR
SmilGWHAOSJ000001580001180.1.v1.484Alkaloid · STR
SmilGWHAOSJ000001970001610.1.v1.484Alkaloid · STR
SmilGWHAOSJ000002620002270.1.v1.484Alkaloid · STR
Smil02G0016690.1.v1.484Alkaloid · TDC
Smil02G0016700.1.v1.484Alkaloid · TDC
Smil05G0000400.1.v1.484Alkaloid · TDC
Smil06G0019930.1.v1.484Alkaloid · TDC
Smil00G0028260.1.v1.484Alkaloid · TRI_TRII
Smil00G0028560.1.v1.484Alkaloid · TRI_TRII
Smil00G0032250.1.v1.484Alkaloid · TRI_TRII
Smil00G0037540.1.v1.484Alkaloid · TRI_TRII
Smil01G0008600.1.v1.484Alkaloid · TRI_TRII
Smil01G0024440.1.v1.484Alkaloid · TRI_TRII
Smil01G0024630.1.v1.484Alkaloid · TRI_TRII
Smil01G0024960.1.v1.484Alkaloid · TRI_TRII
Smil02G0009510.1.v1.484Alkaloid · TRI_TRII
Smil02G0012800.1.v1.484Alkaloid · TRI_TRII
Smil02G0020120.1.v1.484Alkaloid · TRI_TRII
Smil02G0025590.1.v1.484Alkaloid · TRI_TRII
Smil02G0037050.1.v1.484Alkaloid · TRI_TRII
Smil02G0037060.1.v1.484Alkaloid · TRI_TRII
Smil02G0037100.1.v1.484Alkaloid · TRI_TRII
Smil02G0037130.1.v1.484Alkaloid · TRI_TRII
Smil02G0037170.1.v1.484Alkaloid · TRI_TRII
Smil03G0011510.1.v1.484Alkaloid · TRI_TRII
Smil03G0017360.1.v1.484Alkaloid · TRI_TRII
Smil03G0020860.1.v1.484Alkaloid · TRI_TRII
Smil03G0028860.1.v1.484Alkaloid · TRI_TRII
Smil03G0029660.1.v1.484Alkaloid · TRI_TRII
Smil03G0031400.1.v1.484Alkaloid · TRI_TRII

Quantitative legend: measured cells use a diverging row z-score scale with a meaningful centre at zero. Raw values remain available in cell inspectors.

Mapping boundary: Species-level transcriptome matrix summaries are shown independently. Candidate IDs are not joined to expression IDs because annotation versions do not map directly.