Species pathway expression context

Salvia miltiorrhiza

Candidate-to-expression mappings are displayed independently from candidate functional evidence.

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Matrix file
Salvia_miltiorrhiza.gene_tpm_log1p.tsv
Samples
12
Matrix genes
18,549
Expressed genes
18,334
Mapped candidate rows
68
Measured / ND
38 / 30
Partial quantitative coverage

Measured and ND rows coexist. ND cells use a separate hatch pattern and remain outside the continuous legend.

Row z-score−2.50+2.5
ND · Not detected
Unmapped candidate ID
Candidateflower-1flower-2flower-3leaf-1leaf-2leaf-3root-1root-2root-3stem-1stem-2stem-3
Smil04G0019660.1.v1.484Phenylpropanoid · CSE
Smil04G0022700.1.v1.484Phenylpropanoid · CSE
Smil05G0002760.1.v1.484Phenylpropanoid · CSE
Smil05G0005800.1.v1.484Phenylpropanoid · CSE
Smil05G0006440.1.v1.484Phenylpropanoid · CSE
Smil05G0008770.1.v1.484Phenylpropanoid · CSE
Smil05G0010130.1.v1.484Phenylpropanoid · CSE
Smil05G0013000.1.v1.484Phenylpropanoid · CSE
Smil05G0015970.1.v1.484Phenylpropanoid · CSE
Smil05G0016010.1.v1.484Phenylpropanoid · CSE
Smil05G0025440.1.v1.484Phenylpropanoid · CSE
Smil05G0029830.1.v1.484Phenylpropanoid · CSE
Smil05G0032010.1.v1.484Phenylpropanoid · CSE
Smil05G0032400.1.v1.484Phenylpropanoid · CSE
Smil06G0012280.1.v1.484Phenylpropanoid · CSE
Smil06G0016210.1.v1.484Phenylpropanoid · CSE
Smil06G0021450.1.v1.484Phenylpropanoid · CSE
Smil06G0023180.1.v1.484Phenylpropanoid · CSE
Smil06G0025870.1.v1.484Phenylpropanoid · CSE
Smil07G0003450.1.v1.484Phenylpropanoid · CSE
Smil07G0020270.1.v1.484Phenylpropanoid · CSE
Smil00G0009380.1.v1.484Phenylpropanoid · F5H_CYP84A
Smil00G0009560.1.v1.484Phenylpropanoid · F5H_CYP84A
Smil00G0040350.1.v1.484Phenylpropanoid · F5H_CYP84A
Smil01G0020210.1.v1.484Phenylpropanoid · F5H_CYP84A
Smil01G0030340.1.v1.484Phenylpropanoid · F5H_CYP84A
Smil02G0004310.1.v1.484Phenylpropanoid · F5H_CYP84A
Smil03G0017240.1.v1.484Phenylpropanoid · F5H_CYP84A
Smil05G0001500.1.v1.484Phenylpropanoid · F5H_CYP84A
Smil05G0029780.1.v1.484Phenylpropanoid · F5H_CYP84A
Smil00G0007350.1.v1.484Phenylpropanoid · HCT
Smil00G0010540.1.v1.484Phenylpropanoid · HCT
Smil00G0020670.1.v1.484Phenylpropanoid · HCT
Smil00G0031160.1.v1.484Phenylpropanoid · HCT
Smil00G0035980.1.v1.484Phenylpropanoid · HCT
Smil00G0035990.1.v1.484Phenylpropanoid · HCT
Smil00G0036000.1.v1.484Phenylpropanoid · HCT
Smil00G0036020.1.v1.484Phenylpropanoid · HCT
Smil01G0009370.1.v1.484Phenylpropanoid · HCT
Smil01G0028390.1.v1.484Phenylpropanoid · HCT
Smil02G0000580.1.v1.484Phenylpropanoid · HCT
Smil02G0001250.1.v1.484Phenylpropanoid · HCT
Smil02G0001320.1.v1.484Phenylpropanoid · HCT
Smil02G0002470.1.v1.484Phenylpropanoid · HCT
Smil02G0002480.1.v1.484Phenylpropanoid · HCT
Smil02G0004000.1.v1.484Phenylpropanoid · HCT
Smil03G0001930.1.v1.484Phenylpropanoid · HCT
Smil03G0001940.1.v1.484Phenylpropanoid · HCT
Smil03G0001960.1.v1.484Phenylpropanoid · HCT
Smil03G0001980.1.v1.484Phenylpropanoid · HCT

Quantitative legend: measured cells use a diverging row z-score scale with a meaningful centre at zero. Raw values remain available in cell inspectors.

Mapping boundary: Species-level transcriptome matrix summaries are shown independently. Candidate IDs are not joined to expression IDs because annotation versions do not map directly.