Species pathway expression context

Salvia miltiorrhiza

Candidate-to-expression mappings are displayed independently from candidate functional evidence.

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Matrix file
Salvia_miltiorrhiza.gene_tpm_log1p.tsv
Samples
12
Matrix genes
18,549
Expressed genes
18,334
Mapped candidate rows
68
Measured / ND
38 / 30
Partial quantitative coverage

Measured and ND rows coexist. ND cells use a separate hatch pattern and remain outside the continuous legend.

Row z-score−2.50+2.5
ND · Not detected
Unmapped candidate ID
Candidateflower-1flower-2flower-3leaf-1leaf-2leaf-3root-1root-2root-3stem-1stem-2stem-3
Smil03G0021250.1.v1.484Phenylpropanoid · HCT
Smil03G0032930.1.v1.484Phenylpropanoid · HCT
Smil03G0032940.1.v1.484Phenylpropanoid · HCT
Smil05G0011910.1.v1.484Phenylpropanoid · HCT
Smil05G0024980.1.v1.484Phenylpropanoid · HCT
Smil05G0032530.1.v1.484Phenylpropanoid · HCT
Smil05G0032540.1.v1.484Phenylpropanoid · HCT
Smil06G0005700.1.v1.484Phenylpropanoid · HCT
Smil06G0009490.1.v1.484Phenylpropanoid · HCT
Smil06G0017380.1.v1.484Phenylpropanoid · HCT
Smil06G0019870.1.v1.484Phenylpropanoid · HCT
Smil06G0019890.1.v1.484Phenylpropanoid · HCT
Smil06G0019900.1.v1.484Phenylpropanoid · HCT
Smil06G0019910.1.v1.484Phenylpropanoid · HCT
Smil06G0021990.1.v1.484Phenylpropanoid · HCT
Smil06G0022420.1.v1.484Phenylpropanoid · HCT
Smil06G0024550.1.v1.484Phenylpropanoid · HCT
Smil06G0030940.1.v1.484Phenylpropanoid · HCT
Smil07G0002450.1.v1.484Phenylpropanoid · HCT
Smil07G0002470.1.v1.484Phenylpropanoid · HCT
Smil07G0003100.1.v1.484Phenylpropanoid · HCT
Smil07G0003110.1.v1.484Phenylpropanoid · HCT
Smil07G0003120.1.v1.484Phenylpropanoid · HCT
Smil07G0003150.1.v1.484Phenylpropanoid · HCT
Smil07G0003820.1.v1.484Phenylpropanoid · HCT
Smil07G0003830.1.v1.484Phenylpropanoid · HCT
Smil07G0003840.1.v1.484Phenylpropanoid · HCT
Smil07G0004280.1.v1.484Phenylpropanoid · HCT
Smil07G0007650.1.v1.484Phenylpropanoid · HCT
Smil07G0015040.1.v1.484Phenylpropanoid · HCT
Smil00G0007010.1.v1.484Phenylpropanoid · LAC
Smil00G0007020.1.v1.484Phenylpropanoid · LAC
Smil00G0007030.1.v1.484Phenylpropanoid · LAC
Smil00G0007730.1.v1.484Phenylpropanoid · LAC
Smil00G0016460.1.v1.484Phenylpropanoid · LAC
Smil00G0025310.1.v1.484Phenylpropanoid · LAC
Smil00G0026140.1.v1.484Phenylpropanoid · LAC
Smil00G0026170.1.v1.484Phenylpropanoid · LAC
Smil00G0041100.1.v1.484Phenylpropanoid · LAC
Smil00G0043950.1.v1.484Phenylpropanoid · LAC
Smil00G0047530.1.v1.484Phenylpropanoid · LAC
Smil01G0006990.1.v1.484Phenylpropanoid · LAC
Smil01G0019650.1.v1.484Phenylpropanoid · LAC
Smil01G0020150.1.v1.484Phenylpropanoid · LAC
Smil01G0029240.1.v1.484Phenylpropanoid · LAC
Smil02G0009350.1.v1.484Phenylpropanoid · LAC
Smil02G0010940.1.v1.484Phenylpropanoid · LAC
Smil02G0014730.1.v1.484Phenylpropanoid · LAC
Smil02G0014770.1.v1.484Phenylpropanoid · LAC
Smil02G0021200.1.v1.484Phenylpropanoid · LAC

Quantitative legend: measured cells use a diverging row z-score scale with a meaningful centre at zero. Raw values remain available in cell inspectors.

Mapping boundary: Species-level transcriptome matrix summaries are shown independently. Candidate IDs are not joined to expression IDs because annotation versions do not map directly.