Species pathway expression context

Salvia miltiorrhiza

Candidate-to-expression mappings are displayed independently from candidate functional evidence.

Reset
Matrix file
Salvia_miltiorrhiza.gene_tpm_log1p.tsv
Samples
12
Matrix genes
18,549
Expressed genes
18,334
Mapped candidate rows
68
Measured / ND
38 / 30
Partial quantitative coverage

Measured and ND rows coexist. ND cells use a separate hatch pattern and remain outside the continuous legend.

Row z-score−2.50+2.5
ND · Not detected
Unmapped candidate ID
Candidateflower-1flower-2flower-3leaf-1leaf-2leaf-3root-1root-2root-3stem-1stem-2stem-3
Smil04G0016790.1.v1.484Alkaloid · NMT
Smil04G0025400.1.v1.484Alkaloid · NMT
Smil04G0026350.1.v1.484Alkaloid · NMT
Smil05G0008710.1.v1.484Alkaloid · NMT
Smil05G0020610.1.v1.484Alkaloid · NMT
Smil05G0027050.1.v1.484Alkaloid · NMT
Smil05G0028090.1.v1.484Alkaloid · NMT
Smil05G0032240.1.v1.484Alkaloid · NMT
Smil06G0003770.1.v1.484Alkaloid · NMT
Smil06G0021260.1.v1.484Alkaloid · NMT
Smil06G0029450.1.v1.484Alkaloid · NMT
Smil07G0002110.1.v1.484Alkaloid · NMT
Smil07G0006330.1.v1.484Alkaloid · NMT
Smil07G0012060.1.v1.484Alkaloid · NMT
Smil07G0012990.1.v1.484Alkaloid · NMT
Smil07G0014700.1.v1.484Alkaloid · NMT
Smil07G0014830.1.v1.484Alkaloid · NMT
Smil07G0020590.1.v1.484Alkaloid · NMT
SmilGWHAOSJ000007890011070.1.v1.484Alkaloid · NMT
Smil00G0018390.1.v1.484Alkaloid · ODC
Smil00G0035860.1.v1.484Alkaloid · ODC
Smil02G0011010.1.v1.484Alkaloid · ODC
Smil02G0016710.1.v1.484Alkaloid · ODC
Smil02G0019160.1.v1.484Alkaloid · ODC
Smil03G0028660.1.v1.484Alkaloid · ODC
Smil04G0027560.1.v1.484Alkaloid · ODC
Smil05G0009730.1.v1.484Alkaloid · ODC
Smil05G0012840.1.v1.484Alkaloid · ODC
Smil06G0030580.1.v1.484Alkaloid · ODC
Smil07G0008790.1.v1.484Alkaloid · ODC
Smil07G0020020.1.v1.484Alkaloid · ODC
SmilGWHAOSJ000001360000870.1.v1.484Alkaloid · ODC
Smil00G0000980.1.v1.484Alkaloid · PMT
Smil02G0032480.1.v1.484Alkaloid · PMT
Smil05G0011910.1.v1.484Alkaloid · PMT
Smil05G0021920.1.v1.484Alkaloid · PMT
Smil06G0017380.1.v1.484Alkaloid · PMT
Smil06G0019870.1.v1.484Alkaloid · PMT
Smil06G0019900.1.v1.484Alkaloid · PMT
Smil06G0019910.1.v1.484Alkaloid · PMT
Smil06G0022420.1.v1.484Alkaloid · PMT
Smil07G0015040.1.v1.484Alkaloid · PMT
Smil00G0015680.1.v1.484Alkaloid · PYKS
Smil00G0041060.1.v1.484Alkaloid · PYKS
Smil00G0041710.1.v1.484Alkaloid · PYKS
Smil00G0045330.1.v1.484Alkaloid · PYKS
Smil00G0045500.1.v1.484Alkaloid · PYKS
Smil00G0045600.1.v1.484Alkaloid · PYKS
Smil00G0045650.1.v1.484Alkaloid · PYKS
Smil02G0000830.1.v1.484Alkaloid · PYKS

Quantitative legend: measured cells use a diverging row z-score scale with a meaningful centre at zero. Raw values remain available in cell inspectors.

Mapping boundary: Species-level transcriptome matrix summaries are shown independently. Candidate IDs are not joined to expression IDs because annotation versions do not map directly.