Species pathway expression context

Salvia miltiorrhiza

Candidate-to-expression mappings are displayed independently from candidate functional evidence.

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Matrix file
Salvia_miltiorrhiza.gene_tpm_log1p.tsv
Samples
12
Matrix genes
18,549
Expressed genes
18,334
Mapped candidate rows
68
Measured / ND
38 / 30
Partial quantitative coverage

Measured and ND rows coexist. ND cells use a separate hatch pattern and remain outside the continuous legend.

Row z-score−2.50+2.5
ND · Not detected
Unmapped candidate ID
Candidateflower-1flower-2flower-3leaf-1leaf-2leaf-3root-1root-2root-3stem-1stem-2stem-3
Smil02G0000840.1.v1.484Alkaloid · PYKS
Smil02G0000880.1.v1.484Alkaloid · PYKS
Smil02G0002330.1.v1.484Alkaloid · PYKS
Smil02G0002640.1.v1.484Alkaloid · PYKS
Smil02G0008650.1.v1.484Alkaloid · PYKS
Smil02G0018050.1.v1.484Alkaloid · PYKS
Smil03G0003660.1.v1.484Alkaloid · PYKS
Smil03G0020880.1.v1.484Alkaloid · PYKS
Smil04G0025870.1.v1.484Alkaloid · PYKS
Smil04G0026560.1.v1.484Alkaloid · PYKS
Smil05G0013590.1.v1.484Alkaloid · PYKS
Smil05G0013600.1.v1.484Alkaloid · PYKS
Smil05G0015640.1.v1.484Alkaloid · PYKS
Smil06G0000460.1.v1.484Alkaloid · PYKS
Smil06G0008870.1.v1.484Alkaloid · PYKS
Smil06G0014820.1.v1.484Alkaloid · PYKS
Smil06G0021490.1.v1.484Alkaloid · PYKS
Smil06G0025000.1.v1.484Alkaloid · PYKS
Smil07G0001500.1.v1.484Alkaloid · PYKS
SmilGWHAOSJ000009440014710.1.v1.484Alkaloid · PYKS
Smil00G0001500.1.v1.484Alkaloid · SGD
Smil00G0002010.1.v1.484Alkaloid · SGD
Smil00G0008410.1.v1.484Alkaloid · SGD
Smil00G0039980.1.v1.484Alkaloid · SGD
Smil00G0044810.1.v1.484Alkaloid · SGD
Smil01G0003710.1.v1.484Alkaloid · SGD
Smil01G0005380.1.v1.484Alkaloid · SGD
Smil01G0007270.1.v1.484Alkaloid · SGD
Smil01G0013520.1.v1.484Alkaloid · SGD
Smil01G0018550.1.v1.484Alkaloid · SGD
Smil01G0019360.1.v1.484Alkaloid · SGD
Smil01G0022880.1.v1.484Alkaloid · SGD
Smil01G0031760.1.v1.484Alkaloid · SGD
Smil02G0010330.1.v1.484Alkaloid · SGD
Smil02G0011310.1.v1.484Alkaloid · SGD
Smil02G0014120.1.v1.484Alkaloid · SGD
Smil02G0024490.1.v1.484Alkaloid · SGD
Smil02G0026200.1.v1.484Alkaloid · SGD
Smil02G0026740.1.v1.484Alkaloid · SGD
Smil02G0031740.1.v1.484Alkaloid · SGD
Smil02G0031840.1.v1.484Alkaloid · SGD
Smil03G0007210.1.v1.484Alkaloid · SGD
Smil03G0011410.1.v1.484Alkaloid · SGD
Smil03G0020690.1.v1.484Alkaloid · SGD
Smil04G0005760.1.v1.484Alkaloid · SGD
Smil04G0008830.1.v1.484Alkaloid · SGD
Smil04G0012820.1.v1.484Alkaloid · SGD
Smil04G0014480.1.v1.484Alkaloid · SGD
Smil04G0014540.1.v1.484Alkaloid · SGD
Smil04G0017830.1.v1.484Alkaloid · SGD

Quantitative legend: measured cells use a diverging row z-score scale with a meaningful centre at zero. Raw values remain available in cell inspectors.

Mapping boundary: Species-level transcriptome matrix summaries are shown independently. Candidate IDs are not joined to expression IDs because annotation versions do not map directly.