Vitex negundo var. cannabifolia mitochondrial
Biopython GenomeDiagram 1.79; GenBank local location segments.
nad2 · PQ493832.1 · 239,249–241,001 bp · −
nad2 · PQ493832.1 · 4,742–8,556 bp · −
trnY-GUA · PQ493832.1 · 9,077–9,159 bp · −
trnN-GUU · PQ493832.1 · 9,871–9,942 bp · −
trnC-GCA · PQ493832.1 · 12,039–12,109 bp · −
nad1 · PQ493832.1 · 133,376–133,760 bp · −
nad1 · PQ493832.1 · 18,373–19,897 bp · −
nad1 · PQ493832.1 · 358,067–358,125 bp · −
nad1 · PQ493832.1 · 48,401–48,659 bp · −
rps13 · PQ493832.1 · 20,853–21,203 bp · −
ccmFC · PQ493832.1 · 42,386–44,654 bp · −
nad5 · PQ493832.1 · 264,852–267,153 bp · −
nad5 · PQ493832.1 · 272,895–272,916 bp · −
nad5 · PQ493832.1 · 69,484–71,056 bp · −
trnW-CCA · PQ493832.1 · 92,343–92,416 bp · −
nad9 · PQ493832.1 · 93,049–93,621 bp · −
trnH-GUG · PQ493832.1 · 106,892–106,965 bp · −
atp9 · PQ493832.1 · 108,643–108,867 bp · −
trnQ-UUG · PQ493832.1 · 143,178–143,249 bp · −
trnG-GCC · PQ493832.1 · 146,347–146,418 bp · −
cox2 · PQ493832.1 · 165,178–171,137 bp · −
sdh4 · PQ493832.1 · 185,930–186,379 bp · −
cox3 · PQ493832.1 · 186,307–187,104 bp · −
atp8 · PQ493832.1 · 187,693–188,172 bp · −
trnI-CAU · PQ493832.1 · 192,684–192,757 bp · −
ccmB · PQ493832.1 · 197,407–198,027 bp · −
trnfM-CAU · PQ493832.1 · 209,286–209,359 bp · −
rrn26 · PQ493832.1 · 209,556–212,962 bp · −
trnP-UGG · PQ493832.1 · 216,864–216,938 bp · −
trnF-GAA · PQ493832.1 · 217,194–217,267 bp · −
trnS-GCU · PQ493832.1 · 217,623–217,710 bp · −
trnE-UUC · PQ493832.1 · 220,595–220,666 bp · −
cob · PQ493832.1 · 226,972–228,159 bp · −
rps14 · PQ493832.1 · 229,038–229,340 bp · −
rpl5 · PQ493832.1 · 229,342–229,902 bp · −
sdh3 · PQ493832.1 · 241,624–241,926 bp · −
rpl16 · PQ493832.1 · 253,989–254,423 bp · −
rps3 · PQ493832.1 · 254,392–257,814 bp · −
rps4 · PQ493832.1 · 258,310–259,377 bp · −
atp6 · PQ493832.1 · 271,026–271,796 bp · −
trnS-GGA · PQ493832.1 · 288,558–288,644 bp · −
trnD-GUC · PQ493832.1 · 289,278–289,351 bp · −
cox1 · PQ493832.1 · 323,656–325,239 bp · −
rps10 · PQ493832.1 · 325,458–326,570 bp · −
trnS-UGA · PQ493832.1 · 332,192–332,278 bp · −
matR · PQ493832.1 · 355,451–357,412 bp · −
mttB · PQ493832.1 · 358,747–359,535 bp · −
ccmFN · PQ493832.1 · 28,199–29,935 bp · +
nad3 · PQ493832.1 · 53,287–53,643 bp · +
rps12 · PQ493832.1 · 53,692–54,069 bp · +
rps10 · PQ493832.1 · 118,145–119,257 bp · +
nad4L · PQ493832.1 · 120,784–121,086 bp · +
atp4 · PQ493832.1 · 121,272–121,847 bp · +
rrn18 · PQ493832.1 · 126,055–127,711 bp · +
rrn5 · PQ493832.1 · 127,878–127,992 bp · +
trnF-GAA · PQ493832.1 · 128,041–128,110 bp · +
trnM-CAU · PQ493832.1 · 152,869–152,941 bp · +
atp1 · PQ493832.1 · 173,976–175,502 bp · +
rpl10 · PQ493832.1 · 196,613–197,101 bp · +
trnK-UUU · PQ493832.1 · 200,250–200,322 bp · +
rpl2 · PQ493832.1 · 259,787–260,767 bp · +
nad4 · PQ493832.1 · 292,050–300,385 bp · +
nad7 · PQ493832.1 · 308,200–312,958 bp · +
nad6 · PQ493832.1 · 338,074–338,688 bp · +
ccmC · PQ493832.1 · 346,624–347,295 bp · +
0 kb
32 kb
64 kb
96 kb
128 kb
160 kb
192 kb
224 kb
256 kb
288 kb
320 kb
352 kb
Vitex negundo var. cannabifolia
ANNOTATED MITOGENOME
PQ493832.1
384,265 bp · 59 genes
Gene function
NADH dehydrogenase
Transfer RNA
Ribosomal protein
Cytochrome
ATP synthase
Ribosomal RNA
Other
0 96066 192132 288199 384265 bp
Forward strand 5′ → 3′
ccmFN nad3 rps12 rps10 nad4L atp4 rrn18 rrn5 trnF-GAA trnM-CAU atp1 rpl10 trnK-UUU rpl2 nad4 nad7 nad6 ccmC
nad2 trnY-GUA trnN-GUU trnC-GCA nad1 rps13 ccmFC nad1 nad5 trnW-CCA nad9 trnH-GUG atp9 nad1 trnQ-UUG trnG-GCC cox2 sdh4 cox3 atp8 trnI-CAU ccmB trnfM-CAU rrn26 trnP-UGG trnF-GAA trnS-GCU trnE-UUC cob rps14 rpl5 nad2 sdh3 rpl16 rps3 rps4 nad5 atp6 nad5 trnS-GGA trnD-GUC cox1 rps10 trnS-UGA matR nad1 mttB
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. A circular layout does not establish a physical master-circle configuration. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
65 local segments
Gene Type Group Strand Start End Length
nad2 gene − 4742 8556 3815 Locate
trnY-GUA gene − 9077 9159 83 Locate
trnN-GUU gene − 9871 9942 72 Locate
trnC-GCA gene − 12039 12109 71 Locate
nad1 gene − 18373 19897 1525 Locate
rps13 gene − 20853 21203 351 Locate
ccmFN gene + 28199 29935 1737 Locate
ccmFC gene − 42386 44654 2269 Locate
nad1 gene − 48401 48659 259 Locate
nad3 gene + 53287 53643 357 Locate
rps12 gene + 53692 54069 378 Locate
nad5 gene − 69484 71056 1573 Locate
trnW-CCA gene − 92343 92416 74 Locate
nad9 gene − 93049 93621 573 Locate
trnH-GUG gene − 106892 106965 74 Locate
atp9 gene − 108643 108867 225 Locate
rps10 gene + 118145 119257 1113 Locate
nad4L gene + 120784 121086 303 Locate
atp4 gene + 121272 121847 576 Locate
rrn18 gene + 126055 127711 1657 Locate
rrn5 gene + 127878 127992 115 Locate
trnF-GAA gene + 128041 128110 70 Locate
nad1 gene − 133376 133760 385 Locate
trnQ-UUG gene − 143178 143249 72 Locate
trnG-GCC gene − 146347 146418 72 Locate
trnM-CAU gene + 152869 152941 73 Locate
cox2 gene − 165178 171137 5960 Locate
atp1 gene + 173976 175502 1527 Locate
sdh4 gene − 185930 186379 450 Locate
cox3 gene − 186307 187104 798 Locate
atp8 gene − 187693 188172 480 Locate
trnI-CAU gene − 192684 192757 74 Locate
rpl10 gene + 196613 197101 489 Locate
ccmB gene − 197407 198027 621 Locate
trnK-UUU gene + 200250 200322 73 Locate
trnfM-CAU gene − 209286 209359 74 Locate
rrn26 gene − 209556 212962 3407 Locate
trnP-UGG gene − 216864 216938 75 Locate
trnF-GAA gene − 217194 217267 74 Locate
trnS-GCU gene − 217623 217710 88 Locate
trnE-UUC gene − 220595 220666 72 Locate
cob gene − 226972 228159 1188 Locate
rps14 gene − 229038 229340 303 Locate
rpl5 gene − 229342 229902 561 Locate
nad2 gene − 239249 241001 1753 Locate
sdh3 gene − 241624 241926 303 Locate
rpl16 gene − 253989 254423 435 Locate
rps3 gene − 254392 257814 3423 Locate
rps4 gene − 258310 259377 1068 Locate
rpl2 gene + 259787 260767 981 Locate
nad5 gene − 264852 267153 2302 Locate
atp6 gene − 271026 271796 771 Locate
nad5 gene − 272895 272916 22 Locate
trnS-GGA gene − 288558 288644 87 Locate
trnD-GUC gene − 289278 289351 74 Locate
nad4 gene + 292050 300385 8336 Locate
nad7 gene + 308200 312958 4759 Locate
cox1 gene − 323656 325239 1584 Locate
rps10 gene − 325458 326570 1113 Locate
trnS-UGA gene − 332192 332278 87 Locate
nad6 gene + 338074 338688 615 Locate
ccmC gene + 346624 347295 672 Locate
matR gene − 355451 357412 1962 Locate
nad1 gene − 358067 358125 59 Locate
mttB gene − 358747 359535 789 Locate
Status Available
Accession PQ493832.1
Length 384,265 bp
GC content 45.6%
Annotated genes 59
Gene sequence records 9
Nad Dehydrogenase 15 Translation Rna 19 Ribosomal Protein 11 Cytochrome 8 Atp Synthase 5 Ribosomal Rna 3 Other 4
SSR 0
Direct 0
Inverted 0
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources