LamiOmicsDB Lamiaceae Multi-Omics Database
v1 808 species · 3 phylogenies · 6,313 sequences

Pathway-family scientific record

COR

COR enzyme-family module

This module includes PlantSME enzyme-family assignments and traceable candidate protein identifiers from genome-derived or transcriptome-derived protein sets.

Browse candidatesCompare speciesCSV
Stable locus plantsmeAlkaloid-related biosynthesis
Public candidate IDs
2,691
Species with candidates
80
Species with assignments
80
Source assignments
3,143
Gene-tree candidates
0
Motif candidates
0

Evidence profile

Available evidence layers

◆Candidate identifiers2,691 public species-linked identifiers can be inspected.
GTGene-tree workflow0 comparable source candidates; 0 high-confidence source calls.
MMotif-screen proxy0 motif-screen candidates; 0 with all required motif proxies.
100 kbLocal clustering proxy0 clusters across 0 species; maximum cluster size 0.

Comparative signature

Lamiaceae comparison fields

Rate delta
Not calculated
Prevalence delta
Not calculated
Comparable source
PlantSME family assignments
Comparable source count
3,143
Public candidate count
2,691
Evidence mode
plantsme

Species coverage

Assignment and locus coverage by species

Source family counts and public candidate identifiers are shown in separate columns.

SpeciesEvidence stateSource countCandidate IDsExpression
Pogostemon cablinLamioideae · Pogostemon Stable locus 19050 Available
Teucrium chamaedrysAjugoideae · Teucrium Stable locus 16450 No matrix
Teucrium marumAjugoideae · Teucrium Stable locus 9350 No matrix
Ocimum basilicumNepetoideae · Ocimum Stable locus 9150 Available
Nepeta catariaNepetoideae · Nepeta Stable locus 8150 Available
Stenogyne calaminthoidesLamioideae · Stenogyne Stable locus 7350 No matrix
Salvia splendensNepetoideae · Salvia Stable locus 6750 No matrix
Callicarpa americanaCallicarpoideae · Callicarpa Stable locus 6350 No matrix
Elsholtzia splendensNepetoideae · Elsholtzia Stable locus 6050 No matrix
Nepeta mussiniiNepetoideae · Nepeta Stable locus 5750 Available
Phlomoides rotataLamioideae · Phlomoides Stable locus 5650 No matrix
Phlomis fruticosaLamioideae · Phlomis Stable locus 5550 No matrix
Tectona grandisTectonoideae · Tectona Stable locus 5250 Available
Salvia hispanicaNepetoideae · Salvia Stable locus 5050 No matrix
Isodon lophanthoidesNepetoideae · Isodon Stable locus 4949 No matrix
Isodon serraNepetoideae · Isodon Stable locus 4747 No matrix
Origanum majoranaNepetoideae · Origanum Stable locus 4747 No matrix
Perilla frutescensNepetoideae · Perilla Stable locus 4747 No matrix
Thymus vulgarisNepetoideae · Thymus Stable locus 4747 No matrix
Dracocephalum rupestreNepetoideae · Dracocephalum Stable locus 4444 No matrix
Salvia rosmarinusNepetoideae · Salvia Stable locus 4444 Available
Clinopodium barosmumNepetoideae · Clinopodium Stable locus 4242 No matrix
Cornutia pyramidataPremnoideae · Cornutia Stable locus 4242 No matrix
Hyssopus officinalisNepetoideae · Hyssopus Stable locus 4242 No matrix
Thymus quinquecostatusNepetoideae · Thymus Stable locus 3939 No matrix
Premna microphyllaPremnoideae · Premna Stable locus 3838 No matrix
Salvia miltiorrhizaNepetoideae · Salvia Stable locus 3838 Available
Clinopodium gracileNepetoideae · Clinopodium Stable locus 3737 No matrix
Salvia bowleyanaNepetoideae · Salvia Stable locus 3737 No matrix
Salvia divinorumNepetoideae · Salvia Stable locus 3737 No matrix
Leonurus sibiricusLamioideae · Leonurus Stable locus 3636 No matrix
Mosla soochowensisNepetoideae · Mosla Stable locus 3636 No matrix
Ocimum tenuiflorumNepetoideae · Ocimum Stable locus 3535 No matrix
Origanum vulgareNepetoideae · Origanum Stable locus 3535 No matrix
Prunella vulgarisNepetoideae · Prunella Stable locus 3535 No matrix
Callicarpa nudifloraCallicarpoideae · Callicarpa Stable locus 3434 No matrix
Glechoma longitubaNepetoideae · Glechoma Stable locus 3434 No matrix
Stachys officinalisLamioideae · Stachys Stable locus 3434 No matrix
Collinsonia canadensisNepetoideae · Collinsonia Stable locus 3333 No matrix
Leonurus japonicusLamioideae · Leonurus Stable locus 3333 No matrix
Mosla chinensisNepetoideae · Mosla Stable locus 3333 No matrix
Prostanthera lasianthosProstantheroideae · Prostanthera Stable locus 3232 No matrix
Perilla citriodoraNepetoideae · Perilla Stable locus 3131 No matrix
Perilla frutescens var. hirtellaNepetoideae · Perilla Stable locus 3131 No matrix
Schizonepeta tenuifoliaNepetoideae · Schizonepeta Stable locus 3131 No matrix
Ajuga decumbensAjugoideae · Ajuga Stable locus 3030 No matrix
Lamium albumLamioideae · Lamium Stable locus 3030 No matrix
Gmelina philippensisPremnoideae · Gmelina Stable locus 2828 No matrix
Agastache rugosaNepetoideae · Agastache Stable locus 2727 No matrix
Ballota pseudodictamnusLamioideae · Ballota Stable locus 2727 No matrix
Drepanocaryum sewerzowiiNepetoideae · Drepanocaryum Stable locus 2727 No matrix
Glechoma hederaceaNepetoideae · Glechoma Stable locus 2727 No matrix
Petraeovitex bambusetoriumPeronematoideae · Petraeovitex Stable locus 2727 No matrix
Congea tomentosaSymphorematoideae · Congea Stable locus 2626 No matrix
Lycopus americanusNepetoideae · Lycopus Stable locus 2626 No matrix
Marmoritis complanataNepetoideae · Marmoritis Stable locus 2626 No matrix
Scutellaria barbataScutellarioideae · Scutellaria Stable locus 2626 No matrix
Westringia fruticosaProstantheroideae · Westringia Stable locus 2626 No matrix
Mentha longifoliaNepetoideae · Mentha Stable locus 2525 Available
Mentha spicataNepetoideae · Mentha Stable locus 2525 No matrix
Ajuga reptansAjugoideae · Ajuga Stable locus 2424 No matrix
Holmskioldia sanguineaScutellarioideae · Holmskioldia Stable locus 2424 No matrix
Leonotis leonurusLamioideae · Leonotis Stable locus 2424 No matrix
Melissa officinalisNepetoideae · Melissa Stable locus 2424 No matrix
Mentha x piperitaNepetoideae · Mentha Stable locus 2424 No matrix
Marrubium vulgareLamioideae · Marrubium Stable locus 2323 No matrix
Monarda didymaNepetoideae · Monarda Stable locus 2323 No matrix
Lavandula angustifoliaNepetoideae · Lavandula Stable locus 2222 No matrix
Clerodendrum bungeiAjugoideae · Clerodendrum Stable locus 2121 No matrix
Perovskia atriplicifoliaNepetoideae · Perovskia Stable locus 2121 No matrix
Rotheca myricoidesAjugoideae · Rotheca Stable locus 2121 No matrix
Hyptis suaveolensNepetoideae · Hyptis Stable locus 1919 No matrix
Leonurus cardiacaLamioideae · Leonurus Stable locus 1919 No matrix
Scutellaria baicalensisScutellarioideae · Scutellaria Stable locus 1919 No matrix
Plectranthus barbatusNepetoideae · Plectranthus Stable locus 1818 No matrix
Salvia sclareaNepetoideae · Salvia Stable locus 1717 No matrix
Teucrium canadenseAjugoideae · Teucrium Stable locus 1717 No matrix
Agastache foeniculumNepetoideae · Agastache Stable locus 1616 No matrix
Salvia officinalisNepetoideae · Salvia Stable locus 1616 No matrix
Vitex agnus-castusViticoideae · Vitex Stable locus 1616 No matrix

Candidate records

Traceable candidate identifiers

Filter and inspect candidate identifiers for this family.

Clear
Candidate IDSpeciesPathway / familyEvidenceConfidenceIdentityHMM score
tectona_grandis_Tg15g09690.t1
Tectona grandisAlkaloid · CORblast+hmm High 59.1%427.7
tectona_grandis_TgUn003g00040.t1
Tectona grandisAlkaloid · CORblast+hmm High 59.1%426.9
COTO_c27675_g1_i1_len_1004
Congea tomentosaAlkaloid · CORblast+hmm High 58.8%423.5
GMPH_c37523_g1_i1_len_1338
Gmelina philippensisAlkaloid · CORblast+hmm High 58.2%423.3
Teum.08G024560.1
Teucrium marumAlkaloid · CORblast+hmm High 58.8%421.7
PEBA_c37829_g1_i1_len_1400
Petraeovitex bambusetoriumAlkaloid · CORblast+hmm High 58.0%420.8
evm.model.Chr12.1450
Callicarpa nudifloraAlkaloid · CORblast+hmm High 58.3%420.2
COTO_c44278_g2_i2_len_1079
Congea tomentosaAlkaloid · CORblast+hmm High 58.0%419.4
CAame14G0011080.v1.94
Callicarpa americanaAlkaloid · CORblast+hmm High 57.6%416.6
CAame14G0011110.v1.94
Callicarpa americanaAlkaloid · CORblast+hmm High 57.6%416.6
CAame16G0033560.v1.94
Callicarpa americanaAlkaloid · CORblast+hmm High 57.6%416.6
VIAG_c34528_g1_i1_len_1186
Vitex agnus-castusAlkaloid · CORblast+hmm High 59.6%416.6
PRMI_c44166_g1_i3_len_1266
Premna microphyllaAlkaloid · CORblast+hmm High 57.3%416.3
PRMI_c28795_g1_i1_len_1452
Premna microphyllaAlkaloid · CORblast+hmm High 57.2%414.1
CLBU_c21808_g1_i1_len_1269
Clerodendrum bungeiAlkaloid · CORblast+hmm High 57.6%413.7
AJRE_c41061_g1_i2_len_1250
Ajuga reptansAlkaloid · CORblast+hmm High 58.4%413.0
Clgra_031707-T1
Clinopodium gracileAlkaloid · CORblast+hmm High 57.5%412.5
COTO_c44278_g1_i1_len_1103
Congea tomentosaAlkaloid · CORblast+hmm High 56.7%411.7
evm.model.Chr12.1451
Callicarpa nudifloraAlkaloid · CORblast+hmm High 57.1%411.2
CAame14G0011070.v1.94
Callicarpa americanaAlkaloid · CORblast+hmm High 57.2%409.8
CAame16G0033570.v1.94
Callicarpa americanaAlkaloid · CORblast+hmm High 56.9%408.7
GMPH_c35028_g1_i5_len_1085
Gmelina philippensisAlkaloid · CORblast+hmm High 56.7%406.9
MODI_c34836_g1_i3_len_1137
Monarda didymaAlkaloid · CORblast+hmm High 56.6%406.8
tectona_grandis_Tg15g09660.t1
Tectona grandisAlkaloid · CORblast+hmm High 56.4%406.5
scutellaria_barbata_GWHPAOTP019346
Scutellaria barbataAlkaloid · CORblast+hmm High 57.8%406.3
g7752.t1
Ajuga decumbensAlkaloid · CORblast+hmm High 57.1%405.9
MEOF_c24277_g1_i1_len_2100
Melissa officinalisAlkaloid · CORblast+hmm High 56.6%405.6
Teucrium_chamaedrys__Tcha54603
Teucrium chamaedrysAlkaloid · CORblast+hmm High 56.7%405.6
Teum.07G009480.1
Teucrium marumAlkaloid · CORblast+hmm High 56.7%405.1
g7753.t1
Ajuga decumbensAlkaloid · CORblast+hmm High 56.1%404.7
Teucrium_chamaedrys__Tcha80500
Teucrium chamaedrysAlkaloid · CORblast+hmm High 56.7%403.9
COCA_c144337_g1_i1_len_1631
Collinsonia canadensisAlkaloid · CORblast+hmm High 56.3%403.5
tectona_grandis_TgUn003g00080.t1
Tectona grandisAlkaloid · CORblast+hmm High 56.1%402.9
evm.model.chr8.3220
Prunella vulgarisAlkaloid · CORblast+hmm High 56.8%401.6
HOSA_c27719_g1_i1_len_1078
Holmskioldia sanguineaAlkaloid · CORblast+hmm High 55.1%401.3
COPY_c69101_g2_i3_len_1321
Cornutia pyramidataAlkaloid · CORblast+hmm High 55.4%400.5
tectona_grandis_Tg15g09670.t1
Tectona grandisAlkaloid · CORblast+hmm High 55.1%400.4
MESP_c40357_g2_i1_len_1309
Mentha spicataAlkaloid · CORblast+hmm High 56.8%399.8
Clgra_031706-T1
Clinopodium gracileAlkaloid · CORblast+hmm High 56.3%398.7
MEOF_c17204_g1_i3_len_1333
Melissa officinalisAlkaloid · CORblast+hmm High 55.3%398.2
evm.model.LG22.879
Clinopodium barosmumAlkaloid · CORblast+hmm High 56.2%396.7
Clgra_019396-T1
Clinopodium gracileAlkaloid · CORblast+hmm High 56.6%395.6
Teucrium_chamaedrys__Tcha106955
Teucrium chamaedrysAlkaloid · CORblast+hmm High 55.3%395.5
SAOF_c30970_g1_i2_len_1208
Salvia officinalisAlkaloid · CORblast+hmm High 55.9%394.9
origanum_vulgare_842.g252.t1
Origanum vulgareAlkaloid · CORblast+hmm High 56.5%394.2
STOF_c65216_g1_i7_len_1272
Stachys officinalisAlkaloid · CORblast+hmm High 57.2%393.9
Clgra_019395-T1
Clinopodium gracileAlkaloid · CORblast+hmm High 56.0%393.3
Roff11530104860
Salvia rosmarinusAlkaloid · CORblast+hmm High 55.5%392.7
GLHE_c49185_g1_i4_len_1294
Glechoma hederaceaAlkaloid · CORblast+hmm High 55.2%392.5
Lj6g18820.1
Leonurus japonicusAlkaloid · CORblast+hmm High 57.1%391.9