LamiOmicsDB Lamiaceae Multi-Omics Database
v1 808 species · 3 phylogenies · 6,313 sequences

Pathway-family scientific record

MPO

MPO enzyme-family module

This module includes PlantSME enzyme-family assignments and traceable candidate protein identifiers from genome-derived or transcriptome-derived protein sets.

Browse candidatesCompare speciesCSV
Stable locus plantsmeAlkaloid-related biosynthesis
Public candidate IDs
1,063
Species with candidates
80
Species with assignments
80
Source assignments
1,063
Gene-tree candidates
0
Motif candidates
0

Evidence profile

Available evidence layers

◆Candidate identifiers1,063 public species-linked identifiers can be inspected.
GTGene-tree workflow0 comparable source candidates; 0 high-confidence source calls.
MMotif-screen proxy0 motif-screen candidates; 0 with all required motif proxies.
100 kbLocal clustering proxy0 clusters across 0 species; maximum cluster size 0.

Comparative signature

Lamiaceae comparison fields

Rate delta
Not calculated
Prevalence delta
Not calculated
Comparable source
PlantSME family assignments
Comparable source count
1,063
Public candidate count
1,063
Evidence mode
plantsme

Species coverage

Assignment and locus coverage by species

Source family counts and public candidate identifiers are shown in separate columns.

SpeciesEvidence stateSource countCandidate IDsExpression
Pogostemon cablinLamioideae · Pogostemon Stable locus 4545 Available
Teucrium chamaedrysAjugoideae · Teucrium Stable locus 3434 No matrix
Stenogyne calaminthoidesLamioideae · Stenogyne Stable locus 3232 No matrix
Nepeta catariaNepetoideae · Nepeta Stable locus 3131 Available
Callicarpa americanaCallicarpoideae · Callicarpa Stable locus 2525 No matrix
Ocimum basilicumNepetoideae · Ocimum Stable locus 2424 Available
Rotheca myricoidesAjugoideae · Rotheca Stable locus 2121 No matrix
Ballota pseudodictamnusLamioideae · Ballota Stable locus 2020 No matrix
Origanum majoranaNepetoideae · Origanum Stable locus 2020 No matrix
Collinsonia canadensisNepetoideae · Collinsonia Stable locus 1919 No matrix
Leonotis leonurusLamioideae · Leonotis Stable locus 1919 No matrix
Cornutia pyramidataPremnoideae · Cornutia Stable locus 1717 No matrix
Tectona grandisTectonoideae · Tectona Stable locus 1717 Available
Westringia fruticosaProstantheroideae · Westringia Stable locus 1717 No matrix
Lycopus americanusNepetoideae · Lycopus Stable locus 1616 No matrix
Salvia splendensNepetoideae · Salvia Stable locus 1616 No matrix
Glechoma hederaceaNepetoideae · Glechoma Stable locus 1515 No matrix
Glechoma longitubaNepetoideae · Glechoma Stable locus 1515 No matrix
Lamium albumLamioideae · Lamium Stable locus 1515 No matrix
Ocimum tenuiflorumNepetoideae · Ocimum Stable locus 1515 No matrix
Phlomis fruticosaLamioideae · Phlomis Stable locus 1515 No matrix
Agastache foeniculumNepetoideae · Agastache Stable locus 1414 No matrix
Elsholtzia splendensNepetoideae · Elsholtzia Stable locus 1414 No matrix
Hyptis suaveolensNepetoideae · Hyptis Stable locus 1414 No matrix
Hyssopus officinalisNepetoideae · Hyssopus Stable locus 1414 No matrix
Mentha spicataNepetoideae · Mentha Stable locus 1414 No matrix
Mentha x piperitaNepetoideae · Mentha Stable locus 1414 No matrix
Monarda didymaNepetoideae · Monarda Stable locus 1414 No matrix
Nepeta mussiniiNepetoideae · Nepeta Stable locus 1414 Available
Perilla frutescensNepetoideae · Perilla Stable locus 1414 No matrix
Perovskia atriplicifoliaNepetoideae · Perovskia Stable locus 1414 No matrix
Petraeovitex bambusetoriumPeronematoideae · Petraeovitex Stable locus 1414 No matrix
Plectranthus barbatusNepetoideae · Plectranthus Stable locus 1414 No matrix
Scutellaria baicalensisScutellarioideae · Scutellaria Stable locus 1414 No matrix
Stachys officinalisLamioideae · Stachys Stable locus 1414 No matrix
Teucrium marumAjugoideae · Teucrium Stable locus 1414 No matrix
Ajuga reptansAjugoideae · Ajuga Stable locus 1313 No matrix
Leonurus cardiacaLamioideae · Leonurus Stable locus 1313 No matrix
Marrubium vulgareLamioideae · Marrubium Stable locus 1313 No matrix
Teucrium canadenseAjugoideae · Teucrium Stable locus 1313 No matrix
Thymus vulgarisNepetoideae · Thymus Stable locus 1313 No matrix
Salvia rosmarinusNepetoideae · Salvia Stable locus 1212 Available
Gmelina philippensisPremnoideae · Gmelina Stable locus 1111 No matrix
Holmskioldia sanguineaScutellarioideae · Holmskioldia Stable locus 1111 No matrix
Phlomoides rotataLamioideae · Phlomoides Stable locus 1111 No matrix
Premna microphyllaPremnoideae · Premna Stable locus 1111 No matrix
Prostanthera lasianthosProstantheroideae · Prostanthera Stable locus 1111 No matrix
Clinopodium barosmumNepetoideae · Clinopodium Stable locus 1010 No matrix
Congea tomentosaSymphorematoideae · Congea Stable locus 1010 No matrix
Lavandula angustifoliaNepetoideae · Lavandula Stable locus 1010 No matrix
Marmoritis complanataNepetoideae · Marmoritis Stable locus 1010 No matrix
Melissa officinalisNepetoideae · Melissa Stable locus 1010 No matrix
Origanum vulgareNepetoideae · Origanum Stable locus 1010 No matrix
Salvia hispanicaNepetoideae · Salvia Stable locus 1010 No matrix
Vitex agnus-castusViticoideae · Vitex Stable locus 1010 No matrix
Clinopodium gracileNepetoideae · Clinopodium Stable locus 99 No matrix
Dracocephalum rupestreNepetoideae · Dracocephalum Stable locus 99 No matrix
Isodon lophanthoidesNepetoideae · Isodon Stable locus 99 No matrix
Isodon serraNepetoideae · Isodon Stable locus 99 No matrix
Leonurus japonicusLamioideae · Leonurus Stable locus 99 No matrix
Salvia miltiorrhizaNepetoideae · Salvia Stable locus 99 Available
Scutellaria barbataScutellarioideae · Scutellaria Stable locus 99 No matrix
Agastache rugosaNepetoideae · Agastache Stable locus 88 No matrix
Ajuga decumbensAjugoideae · Ajuga Stable locus 88 No matrix
Callicarpa nudifloraCallicarpoideae · Callicarpa Stable locus 88 No matrix
Clerodendrum bungeiAjugoideae · Clerodendrum Stable locus 88 No matrix
Leonurus sibiricusLamioideae · Leonurus Stable locus 88 No matrix
Mentha longifoliaNepetoideae · Mentha Stable locus 88 Available
Mosla chinensisNepetoideae · Mosla Stable locus 88 No matrix
Salvia officinalisNepetoideae · Salvia Stable locus 88 No matrix
Schizonepeta tenuifoliaNepetoideae · Schizonepeta Stable locus 88 No matrix
Drepanocaryum sewerzowiiNepetoideae · Drepanocaryum Stable locus 77 No matrix
Mosla soochowensisNepetoideae · Mosla Stable locus 77 No matrix
Prunella vulgarisNepetoideae · Prunella Stable locus 77 No matrix
Salvia bowleyanaNepetoideae · Salvia Stable locus 77 No matrix
Salvia divinorumNepetoideae · Salvia Stable locus 77 No matrix
Thymus quinquecostatusNepetoideae · Thymus Stable locus 77 No matrix
Perilla citriodoraNepetoideae · Perilla Stable locus 66 No matrix
Perilla frutescens var. hirtellaNepetoideae · Perilla Stable locus 66 No matrix
Salvia sclareaNepetoideae · Salvia Stable locus 44 No matrix

Candidate records

Traceable candidate identifiers

Filter and inspect candidate identifiers for this family.

Clear
Candidate IDSpeciesPathway / familyEvidenceConfidenceIdentityHMM score
Pat_B25G129000.m1
Pogostemon cablinAlkaloid · MPOblast+hmm High 73.2%41.9
MODI_c34270_g1_i1_len_499
Monarda didymaAlkaloid · MPOblast+hmm High 95.8%41.7
XP_042037770.1
Salvia splendensAlkaloid · MPOblast+hmm High 85.9%41.6
BAPS_c111781_g1_i1_len_848
Ballota pseudodictamnusAlkaloid · MPOblast+hmm High 94.3%41.5
PRLA_c72128_g2_i1_len_3052
Prostanthera lasianthosAlkaloid · MPOblast+hmm High 90.6%41.4
rna-gnl|WGS:QFCC|chr13_22960389_22967236.mrna1
Perilla frutescensAlkaloid · MPOblast+hmm High 91.1%41.4
CAame12G0003480.v1.94
Callicarpa americanaAlkaloid · MPOblast+hmm High 91.8%41.2
KAL1568256.1
Salvia divinorumAlkaloid · MPOblast+hmm High 85.8%41.2
MAVU_c18099_g1_i1_len_349
Marrubium vulgareAlkaloid · MPOblast+hmm High 87.9%41.2
Mc8g14520.1
Mosla chinensisAlkaloid · MPOblast+hmm High 91.1%41.2
Ms_c008g01452.1
Mosla soochowensisAlkaloid · MPOblast+hmm High 91.1%41.2
rna-gnl|WGS:QFCC|chr10_38802109_38808686.mrna1
Perilla frutescensAlkaloid · MPOblast+hmm High 90.9%41.2
rna-gnl|WGS:QIYW|chr07_23206840_23213425.mrna1
Perilla citriodoraAlkaloid · MPOblast+hmm High 91.0%41.2
rna-gnl|WGS:QIYW|chr07_23206840_23213425.mrna1
Perilla frutescens var. hirtellaAlkaloid · MPOblast+hmm High 91.0%41.2
CAame12G0003450.v1.94
Callicarpa americanaAlkaloid · MPOblast+hmm High 92.1%41.1
CAame12G0003460.v1.94
Callicarpa americanaAlkaloid · MPOblast+hmm High 92.0%41.1
CAame12G0003470.v1.94
Callicarpa americanaAlkaloid · MPOblast+hmm High 92.1%41.1
COCA_c57555_g2_i1_len_1334
Collinsonia canadensisAlkaloid · MPOblast+hmm High 73.9%41.1
HOSA_c50699_g1_i3_len_2959
Holmskioldia sanguineaAlkaloid · MPOblast+hmm High 91.8%41.1
LAAN_c57210_g3_i2_len_2809
Lavandula angustifoliaAlkaloid · MPOblast+hmm High 84.5%41.1
MACO_g9159.t1
Marmoritis complanataAlkaloid · MPOblast+hmm High 85.3%41.1
ROMY_c81992_g1_i1_len_2721
Rotheca myricoidesAlkaloid · MPOblast+hmm High 86.1%41.1
WEFR_c46288_g1_i3_len_2685
Westringia fruticosaAlkaloid · MPOblast+hmm High 86.5%41.1
BAPS_c44767_g1_i2_len_1714
Ballota pseudodictamnusAlkaloid · MPOblast+hmm High 72.3%41.0
CLBU_c53438_g3_i1_len_2860
Clerodendrum bungeiAlkaloid · MPOblast+hmm High 86.1%41.0
Dru_3G0027540.2
Dracocephalum rupestreAlkaloid · MPOblast+hmm High 87.9%41.0
GMPH_c34351_g1_i2_len_2882
Gmelina philippensisAlkaloid · MPOblast+hmm High 86.4%41.0
GWHPBJVA015338
Thymus quinquecostatusAlkaloid · MPOblast+hmm High 86.2%41.0
GlLon_017156-T1
Glechoma longitubaAlkaloid · MPOblast+hmm High 87.0%41.0
XP_042042536.1
Salvia splendensAlkaloid · MPOblast+hmm High 90.3%41.0
XP_047940421.1
Salvia hispanicaAlkaloid · MPOblast+hmm High 90.4%41.0
g14983.t1.2.5b2d4a34
Nepeta catariaAlkaloid · MPOblast+hmm High 86.6%41.0
g23200.t1
Hyssopus officinalisAlkaloid · MPOblast+hmm High 87.7%41.0
g29990.t1
Nepeta catariaAlkaloid · MPOblast+hmm High 88.6%41.0
AG34_scaffold5_19610T
Agastache rugosaAlkaloid · MPOblast+hmm High 88.5%40.9
CAame12G0003430.v1.94
Callicarpa americanaAlkaloid · MPOblast+hmm High 90.7%40.9
CAame12G0003440.v1.94
Callicarpa americanaAlkaloid · MPOblast+hmm High 90.7%40.9
COTO_c43561_g1_i3_len_2954
Congea tomentosaAlkaloid · MPOblast+hmm High 91.3%40.9
Clgra_028007-T1
Clinopodium gracileAlkaloid · MPOblast+hmm High 86.5%40.9
DRSE_g12359.t1
Drepanocaryum sewerzowiiAlkaloid · MPOblast+hmm High 87.5%40.9
Dru_3G0027540.1
Dracocephalum rupestreAlkaloid · MPOblast+hmm High 86.5%40.9
Mlonscaffold_2_length_455260290064920.1.v1.326
Mentha longifoliaAlkaloid · MPOblast+hmm High 83.4%40.9
evm.model.Chr08.1506
Callicarpa nudifloraAlkaloid · MPOblast+hmm High 90.6%40.9
evm.model.LG13.1580
Clinopodium barosmumAlkaloid · MPOblast+hmm High 89.6%40.9
g14983.t1
Nepeta catariaAlkaloid · MPOblast+hmm High 85.0%40.9
g14983.t1.1.5b2d4a34
Nepeta catariaAlkaloid · MPOblast+hmm High 85.0%40.9
g21334.t1
Nepeta mussiniiAlkaloid · MPOblast+hmm High 85.0%40.9
origanum_vulgare_125483.g15.t1
Origanum vulgareAlkaloid · MPOblast+hmm High 86.6%40.9
MODI_c1270_g1_i1_len_295
Monarda didymaAlkaloid · MPOblast+hmm High 73.5%40.8
Pat_A05G050600.m1
Pogostemon cablinAlkaloid · MPOblast+hmm High 90.7%40.8