LamiOmicsDB Lamiaceae Multi-Omics Database
v1 808 species · 3 phylogenies · 6,313 sequences

Pathway-family scientific record

MPO

MPO enzyme-family module

This module includes PlantSME enzyme-family assignments and traceable candidate protein identifiers from genome-derived or transcriptome-derived protein sets.

Browse candidatesCompare speciesCSV
Stable locus plantsmeAlkaloid-related biosynthesis
Public candidate IDs
1,063
Species with candidates
80
Species with assignments
80
Source assignments
1,063
Gene-tree candidates
0
Motif candidates
0

Evidence profile

Available evidence layers

◆Candidate identifiers1,063 public species-linked identifiers can be inspected.
GTGene-tree workflow0 comparable source candidates; 0 high-confidence source calls.
MMotif-screen proxy0 motif-screen candidates; 0 with all required motif proxies.
100 kbLocal clustering proxy0 clusters across 0 species; maximum cluster size 0.

Comparative signature

Lamiaceae comparison fields

Rate delta
Not calculated
Prevalence delta
Not calculated
Comparable source
PlantSME family assignments
Comparable source count
1,063
Public candidate count
1,063
Evidence mode
plantsme

Species coverage

Assignment and locus coverage by species

Source family counts and public candidate identifiers are shown in separate columns.

SpeciesEvidence stateSource countCandidate IDsExpression
Pogostemon cablinLamioideae · Pogostemon Stable locus 4545 Available
Teucrium chamaedrysAjugoideae · Teucrium Stable locus 3434 No matrix
Stenogyne calaminthoidesLamioideae · Stenogyne Stable locus 3232 No matrix
Nepeta catariaNepetoideae · Nepeta Stable locus 3131 Available
Callicarpa americanaCallicarpoideae · Callicarpa Stable locus 2525 No matrix
Ocimum basilicumNepetoideae · Ocimum Stable locus 2424 Available
Rotheca myricoidesAjugoideae · Rotheca Stable locus 2121 No matrix
Ballota pseudodictamnusLamioideae · Ballota Stable locus 2020 No matrix
Origanum majoranaNepetoideae · Origanum Stable locus 2020 No matrix
Collinsonia canadensisNepetoideae · Collinsonia Stable locus 1919 No matrix
Leonotis leonurusLamioideae · Leonotis Stable locus 1919 No matrix
Cornutia pyramidataPremnoideae · Cornutia Stable locus 1717 No matrix
Tectona grandisTectonoideae · Tectona Stable locus 1717 Available
Westringia fruticosaProstantheroideae · Westringia Stable locus 1717 No matrix
Lycopus americanusNepetoideae · Lycopus Stable locus 1616 No matrix
Salvia splendensNepetoideae · Salvia Stable locus 1616 No matrix
Glechoma hederaceaNepetoideae · Glechoma Stable locus 1515 No matrix
Glechoma longitubaNepetoideae · Glechoma Stable locus 1515 No matrix
Lamium albumLamioideae · Lamium Stable locus 1515 No matrix
Ocimum tenuiflorumNepetoideae · Ocimum Stable locus 1515 No matrix
Phlomis fruticosaLamioideae · Phlomis Stable locus 1515 No matrix
Agastache foeniculumNepetoideae · Agastache Stable locus 1414 No matrix
Elsholtzia splendensNepetoideae · Elsholtzia Stable locus 1414 No matrix
Hyptis suaveolensNepetoideae · Hyptis Stable locus 1414 No matrix
Hyssopus officinalisNepetoideae · Hyssopus Stable locus 1414 No matrix
Mentha spicataNepetoideae · Mentha Stable locus 1414 No matrix
Mentha x piperitaNepetoideae · Mentha Stable locus 1414 No matrix
Monarda didymaNepetoideae · Monarda Stable locus 1414 No matrix
Nepeta mussiniiNepetoideae · Nepeta Stable locus 1414 Available
Perilla frutescensNepetoideae · Perilla Stable locus 1414 No matrix
Perovskia atriplicifoliaNepetoideae · Perovskia Stable locus 1414 No matrix
Petraeovitex bambusetoriumPeronematoideae · Petraeovitex Stable locus 1414 No matrix
Plectranthus barbatusNepetoideae · Plectranthus Stable locus 1414 No matrix
Scutellaria baicalensisScutellarioideae · Scutellaria Stable locus 1414 No matrix
Stachys officinalisLamioideae · Stachys Stable locus 1414 No matrix
Teucrium marumAjugoideae · Teucrium Stable locus 1414 No matrix
Ajuga reptansAjugoideae · Ajuga Stable locus 1313 No matrix
Leonurus cardiacaLamioideae · Leonurus Stable locus 1313 No matrix
Marrubium vulgareLamioideae · Marrubium Stable locus 1313 No matrix
Teucrium canadenseAjugoideae · Teucrium Stable locus 1313 No matrix
Thymus vulgarisNepetoideae · Thymus Stable locus 1313 No matrix
Salvia rosmarinusNepetoideae · Salvia Stable locus 1212 Available
Gmelina philippensisPremnoideae · Gmelina Stable locus 1111 No matrix
Holmskioldia sanguineaScutellarioideae · Holmskioldia Stable locus 1111 No matrix
Phlomoides rotataLamioideae · Phlomoides Stable locus 1111 No matrix
Premna microphyllaPremnoideae · Premna Stable locus 1111 No matrix
Prostanthera lasianthosProstantheroideae · Prostanthera Stable locus 1111 No matrix
Clinopodium barosmumNepetoideae · Clinopodium Stable locus 1010 No matrix
Congea tomentosaSymphorematoideae · Congea Stable locus 1010 No matrix
Lavandula angustifoliaNepetoideae · Lavandula Stable locus 1010 No matrix
Marmoritis complanataNepetoideae · Marmoritis Stable locus 1010 No matrix
Melissa officinalisNepetoideae · Melissa Stable locus 1010 No matrix
Origanum vulgareNepetoideae · Origanum Stable locus 1010 No matrix
Salvia hispanicaNepetoideae · Salvia Stable locus 1010 No matrix
Vitex agnus-castusViticoideae · Vitex Stable locus 1010 No matrix
Clinopodium gracileNepetoideae · Clinopodium Stable locus 99 No matrix
Dracocephalum rupestreNepetoideae · Dracocephalum Stable locus 99 No matrix
Isodon lophanthoidesNepetoideae · Isodon Stable locus 99 No matrix
Isodon serraNepetoideae · Isodon Stable locus 99 No matrix
Leonurus japonicusLamioideae · Leonurus Stable locus 99 No matrix
Salvia miltiorrhizaNepetoideae · Salvia Stable locus 99 Available
Scutellaria barbataScutellarioideae · Scutellaria Stable locus 99 No matrix
Agastache rugosaNepetoideae · Agastache Stable locus 88 No matrix
Ajuga decumbensAjugoideae · Ajuga Stable locus 88 No matrix
Callicarpa nudifloraCallicarpoideae · Callicarpa Stable locus 88 No matrix
Clerodendrum bungeiAjugoideae · Clerodendrum Stable locus 88 No matrix
Leonurus sibiricusLamioideae · Leonurus Stable locus 88 No matrix
Mentha longifoliaNepetoideae · Mentha Stable locus 88 Available
Mosla chinensisNepetoideae · Mosla Stable locus 88 No matrix
Salvia officinalisNepetoideae · Salvia Stable locus 88 No matrix
Schizonepeta tenuifoliaNepetoideae · Schizonepeta Stable locus 88 No matrix
Drepanocaryum sewerzowiiNepetoideae · Drepanocaryum Stable locus 77 No matrix
Mosla soochowensisNepetoideae · Mosla Stable locus 77 No matrix
Prunella vulgarisNepetoideae · Prunella Stable locus 77 No matrix
Salvia bowleyanaNepetoideae · Salvia Stable locus 77 No matrix
Salvia divinorumNepetoideae · Salvia Stable locus 77 No matrix
Thymus quinquecostatusNepetoideae · Thymus Stable locus 77 No matrix
Perilla citriodoraNepetoideae · Perilla Stable locus 66 No matrix
Perilla frutescens var. hirtellaNepetoideae · Perilla Stable locus 66 No matrix
Salvia sclareaNepetoideae · Salvia Stable locus 44 No matrix

Candidate records

Traceable candidate identifiers

Filter and inspect candidate identifiers for this family.

Clear
Candidate IDSpeciesPathway / familyEvidenceConfidenceIdentityHMM score
Pat_A06G049000.m1
Pogostemon cablinAlkaloid · MPOblast+hmm High 90.5%40.8
Pat_B05G047600.m1
Pogostemon cablinAlkaloid · MPOblast+hmm High 90.9%40.8
evm.model.chr8.89
Prunella vulgarisAlkaloid · MPOblast+hmm High 86.0%40.7
Stenogyne_calaminthoides__EVM_prediction_HiC_scaffold_10.31.mRNA1
Stenogyne calaminthoidesAlkaloid · MPOblast+hmm High 46.5%40.6
LYAM_c38502_g2_i9_len_3594
Lycopus americanusAlkaloid · MPOblast+hmm High 92.3%40.5
Roff21350279780
Salvia rosmarinusAlkaloid · MPOblast+hmm High 87.1%40.5
THVU_c70535_g1_i1_len_1355
Thymus vulgarisAlkaloid · MPOblast+hmm High 91.1%40.5
KAL8547656.1
Phlomoides rotataAlkaloid · MPOblast+hmm High 86.0%40.4
Ls4g22180.1
Leonurus sibiricusAlkaloid · MPOblast+hmm High 73.0%40.4
MODI_c42639_g2_i1_len_1676
Monarda didymaAlkaloid · MPOblast+hmm High 82.5%40.4
Roff15910211790
Salvia rosmarinusAlkaloid · MPOblast+hmm High 78.9%40.4
Sbai5A154T169.1
Scutellaria baicalensisAlkaloid · MPOblast+hmm High 78.4%40.3
Teum.11G003250.1
Teucrium marumAlkaloid · MPOblast+hmm High 90.8%40.3
384464.g134.t1
Ocimum basilicumAlkaloid · MPOblast+hmm High 85.2%40.2
557.g104.t1
Ocimum basilicumAlkaloid · MPOblast+hmm High 84.9%40.2
CAame15G0002800.v1.94
Callicarpa americanaAlkaloid · MPOblast+hmm High 77.3%40.2
PRMI_c44504_g4_i1_len_2746
Premna microphyllaAlkaloid · MPOblast+hmm High 86.5%40.2
ocimum_sanctum_Ote100157640081
Ocimum tenuiflorumAlkaloid · MPOblast+hmm High 83.1%40.2
GLHE_c45431_g1_i1_len_439
Glechoma hederaceaAlkaloid · MPOblast+hmm High 95.9%40.1
LECA_c29183_g2_i1_len_2781
Leonurus cardiacaAlkaloid · MPOblast+hmm High 86.1%40.1
Lj5g21280.1
Leonurus japonicusAlkaloid · MPOblast+hmm High 86.1%40.1
Roff21350279770
Salvia rosmarinusAlkaloid · MPOblast+hmm High 87.0%40.1
Sbow03G0027560.1
Salvia bowleyanaAlkaloid · MPOblast+hmm High 85.6%40.1
Teucrium_chamaedrys__Tcha13976
Teucrium chamaedrysAlkaloid · MPOblast+hmm High 89.6%40.1
Teucrium_chamaedrys__Tcha141563
Teucrium chamaedrysAlkaloid · MPOblast+hmm High 89.5%40.1
Teucrium_chamaedrys__Tcha204927
Teucrium chamaedrysAlkaloid · MPOblast+hmm High 89.6%40.1
Teucrium_chamaedrys__Tcha94739
Teucrium chamaedrysAlkaloid · MPOblast+hmm High 89.6%40.1
Teum.11G003250.2
Teucrium marumAlkaloid · MPOblast+hmm High 89.6%40.1
Teum.11G003250.3
Teucrium marumAlkaloid · MPOblast+hmm High 89.6%40.1
g28993.t1
Ajuga decumbensAlkaloid · MPOblast+hmm High 85.7%40.1
g9549.t1
Salvia sclareaAlkaloid · MPOblast+hmm High 90.1%40.1
LAAN_c57210_g2_i1_len_2897
Lavandula angustifoliaAlkaloid · MPOblast+hmm High 85.5%40.0
MEPI_c61118_g1_i1_len_840
Mentha x piperitaAlkaloid · MPOblast+hmm High 87.1%40.0
Pat_B06G048200.m1
Pogostemon cablinAlkaloid · MPOblast+hmm High 90.6%40.0
AJRE_c13967_g1_i1_len_3260
Ajuga reptansAlkaloid · MPOblast+hmm High 85.5%39.9
CAame15G0002790.v1.94
Callicarpa americanaAlkaloid · MPOblast+hmm High 87.3%39.8
CAame15G0002810.v1.94
Callicarpa americanaAlkaloid · MPOblast+hmm High 88.4%39.8
HYSU_c30391_g1_i4_len_2947
Hyptis suaveolensAlkaloid · MPOblast+hmm High 86.2%39.8
Mc2g14830.1
Mosla chinensisAlkaloid · MPOblast+hmm High 65.9%39.8
evm.model.Chr14.119
Callicarpa nudifloraAlkaloid · MPOblast+hmm High 89.0%39.8
g30519.t1
Ajuga decumbensAlkaloid · MPOblast+hmm High 89.8%39.8
scutellaria_barbata_GWHPAOTP017677
Scutellaria barbataAlkaloid · MPOblast+hmm High 84.2%39.8
AGFO_c48247_g1_i1_len_490
Agastache foeniculumAlkaloid · MPOblast+hmm High 95.7%39.7
PHFR_c84798_g1_i1_len_328
Phlomis fruticosaAlkaloid · MPOblast+hmm High 68.9%39.7
evm.model.chr7.475
Prunella vulgarisAlkaloid · MPOblast+hmm High 90.2%39.7
tectona_grandis_Tg10g02630.t1
Tectona grandisAlkaloid · MPOblast+hmm High 91.0%39.7
Es4A.G065100.t1
Elsholtzia splendensAlkaloid · MPOblast+hmm High 87.3%39.6
Es4B.G065900.t1
Elsholtzia splendensAlkaloid · MPOblast+hmm High 87.5%39.6
HOSA_c18571_g1_i1_len_469
Holmskioldia sanguineaAlkaloid · MPOblast+hmm High 73.7%39.6
MEPI_c58311_g1_i1_len_1356
Mentha x piperitaAlkaloid · MPOblast+hmm High 73.4%39.6