Traceable computational records

Pathway candidate records

Search 173,329 species-linked candidate identifiers. Confidence and evidence mode are preserved separately; no candidate is presented as biochemically validated.

Download records Evidence definitions

All candidates: 173,329
Gene-tree candidates: 238
Motif candidates: 1,287
High confidence: 67
Public species: 80
Stable modules: 105

Candidate catalogue

173,329 matching records

CSV

Candidate ID	Species	Pathway / family	Evidence	Confidence	Identity	HMM score
PHFR_c72907_g1_i2_len_1804	Phlomis fruticosa	Phenylpropanoid · `CCR`	blast+hmm	High	71.8%	80.2
PRMI_c38965_g2_i1_len_310	Premna microphylla	Phenylpropanoid · `HCT`	blast+hmm	High	59.8%	80.2
SAOF_c30557_g1_i3_len_1710	Salvia officinalis	Phenylpropanoid · `CCR`	blast+hmm	High	70.2%	80.2
Sbow02G0040170.1	Salvia bowleyana	Alkaloid · `MPO`	blast+hmm	High	65.4%	80.2
THVU_c49514_g1_i1_len_798	Thymus vulgaris	Alkaloid · `COR`	blast+hmm	High	33.5%	80.2
Teucrium_chamaedrys__Tcha132135	Teucrium chamaedrys	Terpenoid · `HDR_IspH`	blast+hmm	High	74.0%	80.2
XP_041992914.1	Salvia splendens	Alkaloid · `MPO`	blast+hmm	High	62.2%	80.2
evm.model.LG11.801	Clinopodium barosmum	Alkaloid · `7DLGT`	blast+hmm	High	69.3%	80.2
origanum_vulgare_909.g5.t1	Origanum vulgare	Phenylpropanoid · `CCR`	blast+hmm	High	71.0%	80.2
origanum_vulgare_909.g5.t1.1.5db0b566	Origanum vulgare	Phenylpropanoid · `CCR`	blast+hmm	High	71.0%	80.2
rna-gnl\|WGS:QFCC\|chr20_19753212_19754366.mrna1	Perilla frutescens	Phenylpropanoid · `CCR`	blast+hmm	High	73.1%	80.2
rna-gnl\|WGS:QIYW\|chr05_44248780_44249934.mrna1	Perilla citriodora	Phenylpropanoid · `CCR`	blast+hmm	High	73.1%	80.2
rna-gnl\|WGS:QIYW\|chr05_44248780_44249934.mrna1	Perilla frutescens var. hirtella	Phenylpropanoid · `CCR`	blast+hmm	High	73.1%	80.2
COTO_c27610_g1_i1_len_621	Congea tomentosa	Terpenoid · `FPPS`	blast+hmm	High	30.3%	80.1
COTO_c41458_g1_i3_len_3189	Congea tomentosa	Phenylpropanoid · `4CL`	blast+hmm	High	65.5%	80.1
Clgra_001876-T1	Clinopodium gracile	Phenylpropanoid · `CCR`	blast+hmm	High	69.6%	80.1
GLHE_c46920_g1_i4_len_722	Glechoma hederacea	Flavonoid · `F3H_CYP75B`	blast+hmm	High	33.9%	80.1
HYSU_c90564_g1_i1_len_389	Hyptis suaveolens	Terpenoid · `TPS`	blast+hmm	High	53.8%	80.1
Ls2g22870.1	Leonurus sibiricus	Phenylpropanoid · `CCR`	blast+hmm	High	80.7%	80.1
Ls8g10950.1	Leonurus sibiricus	Alkaloid · `NMT`	blast+hmm	High	47.2%	80.1
PEAT_c10159_g1_i1_len_584	Perovskia atriplicifolia	Phenylpropanoid · `4CL`	blast+hmm	High	67.0%	80.1
PEBA_c62308_g1_i1_len_347	Petraeovitex bambusetorium	Steroid / sterol · `CAS`	blast+hmm	High	80.9%	80.1
PLBA_c98499_g1_i1_len_756	Plectranthus barbatus	Phenylpropanoid · `4CL`	blast+hmm	High	68.7%	80.1
STOF_c153544_g1_i1_len_260	Stachys officinalis	Alkaloid · `GES`	blast+hmm	High	53.5%	80.1
STOF_c63254_g1_i1_len_2784	Stachys officinalis	Phenylpropanoid · `CCR`	blast+hmm	High	81.8%	80.1
Sch000005867	Schizonepeta tenuifolia	Phenylpropanoid · `CCR`	blast+hmm	High	70.4%	80.1
Smil00G0016690.1.v1.484	Salvia miltiorrhiza	Alkaloid · `MPO`	blast+hmm	High	65.1%	80.1
THVU_c15805_g1_i1_len_479	Thymus vulgaris	Terpenoid · `TPS`	blast+hmm	High	74.0%	80.1
THVU_c68942_g3_i1_len_365	Thymus vulgaris	Phenylpropanoid · `LAC`	blast+hmm	High	64.5%	80.1
WEFR_c30857_g1_i1_len_1058	Westringia fruticosa	Alkaloid · `NMT`	blast+hmm	High	53.0%	80.1
evm.model.Chr06.1107	Callicarpa nudiflora	Phenylpropanoid · `F5H_CYP84A`	blast+hmm	High	34.5%	80.1
ocimum_sanctum_Ote100104840101	Ocimum tenuiflorum	Terpenoid · `FPPS`	blast+hmm	High	33.3%	80.1
tectona_grandis_Tg08g10080.t1	Tectona grandis	Steroid / sterol · `SMT1_SMT2_SMT3`	blast+hmm	High	50.5%	80.1
tectona_grandis_Tg19g00950.t1	Tectona grandis	Alkaloid · `MPO`	blast+hmm	High	67.4%	80.1
tectona_grandis_Tg19g02610.t1	Tectona grandis	Alkaloid · `MPO`	blast+hmm	High	67.3%	80.1
BAPS_c44984_g1_i1_len_2789	Ballota pseudodictamnus	Phenylpropanoid · `CCR`	blast+hmm	High	80.6%	80.0
GWHPBJVA016988	Thymus quinquecostatus	Phenylpropanoid · `CCR`	blast+hmm	High	71.3%	80.0
GWHPBJVA023833	Thymus quinquecostatus	Phenylpropanoid · `CCR`	blast+hmm	High	71.1%	80.0
HYSU_c7113_g1_i2_len_357	Hyptis suaveolens	Steroid / sterol · `CAS`	blast+hmm	High	84.0%	80.0
LAAL_c4149_g1_i1_len_407	Lamium album	Phenylpropanoid · `CCoAOMT`	blast+hmm	High	69.9%	80.0
LAAN_c27135_g1_i1_len_2569	Lavandula angustifolia	Alkaloid · `MPO`	blast+hmm	High	63.4%	80.0
MAVU_c23156_g1_i2_len_2130	Marrubium vulgare	Terpenoid · `CYP71`	blast+hmm	High	67.2%	80.0
MEOF_c24973_g1_i1_len_278	Melissa officinalis	Phenylpropanoid · `HCT`	blast+hmm	High	63.2%	80.0
MESP_c38517_g2_i1_len_1270	Mentha spicata	Terpenoid · `CYP71`	blast+hmm	High	70.5%	80.0
Ms_c083g00003.1	Mosla soochowensis	Steroid / sterol · `SQS_FDFT1`	blast+hmm	High	45.7%	80.0
PRMI_c2554_g1_i1_len_384	Premna microphylla	Terpenoid · `TPS`	blast+hmm	High	52.4%	80.0
Pat_A22G090300.m1	Pogostemon cablin	Terpenoid · `CYP71`	blast+hmm	High	67.4%	80.0
Pat_B22G087000.m1	Pogostemon cablin	Terpenoid · `CYP71`	blast+hmm	High	68.0%	80.0
Sbow02G0039120.1	Salvia bowleyana	Terpenoid · `HMGS`	blast+hmm	High	78.6%	80.0
TECA_c18453_g1_i1_len_590	Teucrium canadense	Terpenoid · `FPPS`	blast+hmm	High	30.5%	80.0