LamiOmicsDB Lamiaceae Multi-Omics Database
v1 808 species · 3 phylogenies · 6,313 sequences

Pathway-family scientific record

CCoAOMT

Caffeoyl-CoA O-methyltransferase family

This module includes PlantSME enzyme-family assignments and traceable candidate protein identifiers from genome-derived or transcriptome-derived protein sets.

Browse candidatesCompare speciesCSV
Stable locus plantsmePhenylpropanoid biosynthesis
Public candidate IDs
2,210
Species with candidates
80
Species with assignments
80
Source assignments
2,527
Gene-tree candidates
0
Motif candidates
0

Evidence profile

Available evidence layers

◆Candidate identifiers2,210 public species-linked identifiers can be inspected.
GTGene-tree workflow0 comparable source candidates; 0 high-confidence source calls.
MMotif-screen proxy0 motif-screen candidates; 0 with all required motif proxies.
100 kbLocal clustering proxy0 clusters across 0 species; maximum cluster size 0.

Comparative signature

Lamiaceae comparison fields

Rate delta
Not calculated
Prevalence delta
Not calculated
Comparable source
PlantSME family assignments
Comparable source count
2,527
Public candidate count
2,210
Evidence mode
plantsme

Species coverage

Assignment and locus coverage by species

Source family counts and public candidate identifiers are shown in separate columns.

SpeciesEvidence stateSource countCandidate IDsExpression
Teucrium chamaedrysAjugoideae · Teucrium Stable locus 18550 No matrix
Ocimum basilicumNepetoideae · Ocimum Stable locus 9750 Available
Pogostemon cablinLamioideae · Pogostemon Stable locus 9150 Available
Elsholtzia splendensNepetoideae · Elsholtzia Stable locus 8750 No matrix
Teucrium marumAjugoideae · Teucrium Stable locus 8150 No matrix
Callicarpa americanaCallicarpoideae · Callicarpa Stable locus 6150 No matrix
Perilla frutescensNepetoideae · Perilla Stable locus 5850 No matrix
Tectona grandisTectonoideae · Tectona Stable locus 5650 Available
Stenogyne calaminthoidesLamioideae · Stenogyne Stable locus 5150 No matrix
Salvia hispanicaNepetoideae · Salvia Stable locus 4848 No matrix
Nepeta catariaNepetoideae · Nepeta Stable locus 4646 Available
Salvia rosmarinusNepetoideae · Salvia Stable locus 4141 Available
Salvia splendensNepetoideae · Salvia Stable locus 4040 No matrix
Scutellaria baicalensisScutellarioideae · Scutellaria Stable locus 3838 No matrix
Mosla soochowensisNepetoideae · Mosla Stable locus 3737 No matrix
Prunella vulgarisNepetoideae · Prunella Stable locus 3737 No matrix
Clinopodium barosmumNepetoideae · Clinopodium Stable locus 3434 No matrix
Isodon lophanthoidesNepetoideae · Isodon Stable locus 3434 No matrix
Isodon serraNepetoideae · Isodon Stable locus 3434 No matrix
Callicarpa nudifloraCallicarpoideae · Callicarpa Stable locus 3333 No matrix
Hyssopus officinalisNepetoideae · Hyssopus Stable locus 3333 No matrix
Salvia miltiorrhizaNepetoideae · Salvia Stable locus 3333 Available
Origanum vulgareNepetoideae · Origanum Stable locus 3232 No matrix
Glechoma longitubaNepetoideae · Glechoma Stable locus 3131 No matrix
Mosla chinensisNepetoideae · Mosla Stable locus 3131 No matrix
Nepeta mussiniiNepetoideae · Nepeta Stable locus 3131 Available
Clinopodium gracileNepetoideae · Clinopodium Stable locus 3030 No matrix
Cornutia pyramidataPremnoideae · Cornutia Stable locus 3030 No matrix
Marmoritis complanataNepetoideae · Marmoritis Stable locus 3030 No matrix
Salvia divinorumNepetoideae · Salvia Stable locus 3030 No matrix
Salvia sclareaNepetoideae · Salvia Stable locus 3030 No matrix
Drepanocaryum sewerzowiiNepetoideae · Drepanocaryum Stable locus 2929 No matrix
Salvia bowleyanaNepetoideae · Salvia Stable locus 2828 No matrix
Scutellaria barbataScutellarioideae · Scutellaria Stable locus 2828 No matrix
Thymus quinquecostatusNepetoideae · Thymus Stable locus 2828 No matrix
Ajuga decumbensAjugoideae · Ajuga Stable locus 2727 No matrix
Ocimum tenuiflorumNepetoideae · Ocimum Stable locus 2727 No matrix
Perilla citriodoraNepetoideae · Perilla Stable locus 2626 No matrix
Perilla frutescens var. hirtellaNepetoideae · Perilla Stable locus 2626 No matrix
Clerodendrum bungeiAjugoideae · Clerodendrum Stable locus 2525 No matrix
Congea tomentosaSymphorematoideae · Congea Stable locus 2525 No matrix
Teucrium canadenseAjugoideae · Teucrium Stable locus 2525 No matrix
Agastache rugosaNepetoideae · Agastache Stable locus 2424 No matrix
Dracocephalum rupestreNepetoideae · Dracocephalum Stable locus 2424 No matrix
Petraeovitex bambusetoriumPeronematoideae · Petraeovitex Stable locus 2424 No matrix
Premna microphyllaPremnoideae · Premna Stable locus 2424 No matrix
Mentha longifoliaNepetoideae · Mentha Stable locus 2323 Available
Rotheca myricoidesAjugoideae · Rotheca Stable locus 2323 No matrix
Hyptis suaveolensNepetoideae · Hyptis Stable locus 2222 No matrix
Phlomis fruticosaLamioideae · Phlomis Stable locus 2222 No matrix
Glechoma hederaceaNepetoideae · Glechoma Stable locus 2121 No matrix
Agastache foeniculumNepetoideae · Agastache Stable locus 2020 No matrix
Holmskioldia sanguineaScutellarioideae · Holmskioldia Stable locus 2020 No matrix
Leonurus sibiricusLamioideae · Leonurus Stable locus 2020 No matrix
Marrubium vulgareLamioideae · Marrubium Stable locus 2020 No matrix
Monarda didymaNepetoideae · Monarda Stable locus 2020 No matrix
Phlomoides rotataLamioideae · Phlomoides Stable locus 2020 No matrix
Prostanthera lasianthosProstantheroideae · Prostanthera Stable locus 1919 No matrix
Collinsonia canadensisNepetoideae · Collinsonia Stable locus 1818 No matrix
Leonurus japonicusLamioideae · Leonurus Stable locus 1818 No matrix
Melissa officinalisNepetoideae · Melissa Stable locus 1818 No matrix
Perovskia atriplicifoliaNepetoideae · Perovskia Stable locus 1818 No matrix
Salvia officinalisNepetoideae · Salvia Stable locus 1818 No matrix
Stachys officinalisLamioideae · Stachys Stable locus 1818 No matrix
Vitex agnus-castusViticoideae · Vitex Stable locus 1818 No matrix
Gmelina philippensisPremnoideae · Gmelina Stable locus 1717 No matrix
Lycopus americanusNepetoideae · Lycopus Stable locus 1717 No matrix
Mentha spicataNepetoideae · Mentha Stable locus 1717 No matrix
Thymus vulgarisNepetoideae · Thymus Stable locus 1717 No matrix
Ajuga reptansAjugoideae · Ajuga Stable locus 1616 No matrix
Ballota pseudodictamnusLamioideae · Ballota Stable locus 1616 No matrix
Mentha x piperitaNepetoideae · Mentha Stable locus 1616 No matrix
Leonurus cardiacaLamioideae · Leonurus Stable locus 1515 No matrix
Origanum majoranaNepetoideae · Origanum Stable locus 1515 No matrix
Plectranthus barbatusNepetoideae · Plectranthus Stable locus 1515 No matrix
Schizonepeta tenuifoliaNepetoideae · Schizonepeta Stable locus 1515 No matrix
Westringia fruticosaProstantheroideae · Westringia Stable locus 1515 No matrix
Lavandula angustifoliaNepetoideae · Lavandula Stable locus 1414 No matrix
Lamium albumLamioideae · Lamium Stable locus 1313 No matrix
Leonotis leonurusLamioideae · Leonotis Stable locus 1313 No matrix

Candidate records

Traceable candidate identifiers

Filter and inspect candidate identifiers for this family.

Clear
Candidate IDSpeciesPathway / familyEvidenceConfidenceIdentityHMM score
COTO_c39328_g2_i1_len_779
Congea tomentosaPhenylpropanoid · CCoAOMTblast+hmm High 77.2%219.9
KAL1565281.1
Salvia divinorumPhenylpropanoid · CCoAOMTblast+hmm High 70.7%209.5
VIAG_c42275_g1_i1_len_1337
Vitex agnus-castusPhenylpropanoid · CCoAOMTblast+hmm High 75.1%209.2
XP_041989715.1
Salvia splendensPhenylpropanoid · CCoAOMTblast+hmm High 79.8%209.1
XP_041989716.1
Salvia splendensPhenylpropanoid · CCoAOMTblast+hmm High 80.9%209.1
tectona_grandis_Tg02g05230.t1
Tectona grandisPhenylpropanoid · CCoAOMTblast+hmm High 73.9%209.0
g17240.t1
Ajuga decumbensPhenylpropanoid · CCoAOMTblast+hmm High 91.7%208.8
Teucrium_chamaedrys__Tcha66286
Teucrium chamaedrysPhenylpropanoid · CCoAOMTblast+hmm High 92.7%207.4
g12028.t1
Salvia sclareaPhenylpropanoid · CCoAOMTblast+hmm High 86.6%207.3
Sbai1A132T69.1
Scutellaria baicalensisPhenylpropanoid · CCoAOMTblast+hmm High 64.2%207.2
Ms_c009g02482.1
Mosla soochowensisPhenylpropanoid · CCoAOMTblast+hmm High 89.8%206.9
Teucrium_chamaedrys__Tcha70660
Teucrium chamaedrysPhenylpropanoid · CCoAOMTblast+hmm High 93.2%206.8
AJRE_c42665_g1_i1_len_954
Ajuga reptansPhenylpropanoid · CCoAOMTblast+hmm High 92.2%206.6
HYSU_c32041_g1_i3_len_1051
Hyptis suaveolensPhenylpropanoid · CCoAOMTblast+hmm High 71.0%206.3
Mc6g03980.1
Mosla chinensisPhenylpropanoid · CCoAOMTblast+hmm High 71.1%206.3
Teucrium_chamaedrys__Tcha73838
Teucrium chamaedrysPhenylpropanoid · CCoAOMTblast+hmm High 92.7%205.8
Mc4g26630.1
Mosla chinensisPhenylpropanoid · CCoAOMTblast+hmm High 89.9%205.5
GMPH_c33304_g1_i1_len_1622
Gmelina philippensisPhenylpropanoid · CCoAOMTblast+hmm High 72.6%205.4
Sbai8A9T170.1
Scutellaria baicalensisPhenylpropanoid · CCoAOMTblast+hmm High 92.3%205.2
tectona_grandis_Tg12g13040.t1
Tectona grandisPhenylpropanoid · CCoAOMTblast+hmm High 92.5%205.2
MACO_g4227.t1
Marmoritis complanataPhenylpropanoid · CCoAOMTblast+hmm High 89.8%205.0
g12970.t1
Nepeta catariaPhenylpropanoid · CCoAOMTblast+hmm High 89.4%204.9
368477.g2.t1
Ocimum basilicumPhenylpropanoid · CCoAOMTblast+hmm High 70.2%204.8
GlLon_013245-T1
Glechoma longitubaPhenylpropanoid · CCoAOMTblast+hmm High 90.7%204.7
THVU_c69134_g1_i3_len_1007
Thymus vulgarisPhenylpropanoid · CCoAOMTblast+hmm High 94.6%204.7
Teucrium_chamaedrys__Tcha162205
Teucrium chamaedrysPhenylpropanoid · CCoAOMTblast+hmm High 70.3%204.7
g2538.t1
Nepeta mussiniiPhenylpropanoid · CCoAOMTblast+hmm High 89.4%204.7
385214.g124.t1
Ocimum basilicumPhenylpropanoid · CCoAOMTblast+hmm High 89.5%204.6
rna-gnl|WGS:QFCC|chr11_29731941_29733817.mrna1
Perilla frutescensPhenylpropanoid · CCoAOMTblast+hmm High 84.6%204.6
GWHPBJVA006517
Thymus quinquecostatusPhenylpropanoid · CCoAOMTblast+hmm High 89.9%204.5
Mlonscaffold_6_length_375374740145380.1.v1.326
Mentha longifoliaPhenylpropanoid · CCoAOMTblast+hmm High 87.4%204.4
origanum_vulgare_507.g359.t1
Origanum vulgarePhenylpropanoid · CCoAOMTblast+hmm High 89.1%204.4
GWHPBJVA017988
Thymus quinquecostatusPhenylpropanoid · CCoAOMTblast+hmm High 95.0%204.3
ORMA_c44829_g2_i1_len_1055
Origanum majoranaPhenylpropanoid · CCoAOMTblast+hmm High 89.1%204.3
Pat_B01G205300.m1
Pogostemon cablinPhenylpropanoid · CCoAOMTblast+hmm High 93.6%204.3
MACO_g1685.t1
Marmoritis complanataPhenylpropanoid · CCoAOMTblast+hmm High 95.9%204.2
MODI_c36423_g1_i1_len_943
Monarda didymaPhenylpropanoid · CCoAOMTblast+hmm High 95.9%204.2
g2538.t1.1.5b2c7c7e
Nepeta mussiniiPhenylpropanoid · CCoAOMTblast+hmm High 93.0%204.2
STOF_c61893_g1_i3_len_1121
Stachys officinalisPhenylpropanoid · CCoAOMTblast+hmm High 91.4%204.1
Teucrium_chamaedrys__Tcha47323
Teucrium chamaedrysPhenylpropanoid · CCoAOMTblast+hmm High 92.7%204.1
Teum.05G024710.1
Teucrium marumPhenylpropanoid · CCoAOMTblast+hmm High 92.7%204.1
evm.model.LG02.1956
Clinopodium barosmumPhenylpropanoid · CCoAOMTblast+hmm High 87.8%204.1
evm.model.chr2.599
Prunella vulgarisPhenylpropanoid · CCoAOMTblast+hmm High 95.8%204.0
Clgra_015096-T1
Clinopodium gracilePhenylpropanoid · CCoAOMTblast+hmm High 88.3%203.9
evm.model.chr9.507
Prunella vulgarisPhenylpropanoid · CCoAOMTblast+hmm High 88.7%203.9
385214.g124.t1.1.5db153ca
Ocimum basilicumPhenylpropanoid · CCoAOMTblast+hmm High 93.0%203.8
PEAT_c30764_g1_i2_len_1064
Perovskia atriplicifoliaPhenylpropanoid · CCoAOMTblast+hmm High 90.3%203.7
VIAG_c49732_g1_i1_len_865
Vitex agnus-castusPhenylpropanoid · CCoAOMTblast+hmm High 90.8%203.7
g20251.t1
Nepeta catariaPhenylpropanoid · CCoAOMTblast+hmm High 95.5%203.7
rna-gnl|WGS:QFCC|chr12_29962733_29964514.mrna1
Perilla frutescensPhenylpropanoid · CCoAOMTblast+hmm High 84.2%203.7